Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7250
Gene name
Locationscaffold_69:4160..4596
Strand-
Gene length (bp)436
Transcript length (bp)387
Coding sequence length (bp)384
Protein length (aa) 128

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0451 0.039 0.9583 0.0393 0.0688 0.0035 0.0446 0.1114 0.0537 0.004

SignalP

SignalP signal predicted Location Score
Yes 1 - 18 0.999474

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup2396
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2684
Ophiocordyceps australis map64 (Brazil) OphauB2|3997
Ophiocordyceps camponoti-floridani Ophcf2|06982
Ophiocordyceps camponoti-rufipedis Ophun1|7261
Ophiocordyceps kimflemingae Ophio5|7250 (this protein)
Ophiocordyceps subramaniannii Hirsu2|3384

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7250
MIFSSLATAVLLAAGCQAAVVVPRLSHLADFRLFSGTNCGPENLGIWTIVEGDLKPGECKAIPDHSVVSIKIESI
SKDCQLTFHKNAGCGTWDPKLGRHEWGYTISDRKCLTVPTGNKFRAFTISCQR
Coding >Ophio5|7250
ATGATCTTCTCCTCTCTCGCCACTGCCGTCCTTCTGGCTGCCGGCTGCCAGGCTGCTGTTGTGGTCCCTCGCCTC
AGCCATCTGGCCGACTTCCGCCTCTTCAGCGGCACCAACTGCGGCCCGGAGAACCTCGGCATCTGGACCATCGTC
GAGGGCGACTTAAAGCCCGGGGAGTGCAAGGCAATCCCCGACCACAGTGTCGTCTCAATCAAGATCGAGAGCATT
TCCAAAGACTGCCAGCTCACCTTTCACAAGAATGCGGGATGCGGAACGTGGGACCCAAAACTCGGCAGGCATGAA
TGGGGATACACTATCTCCGACCGCAAATGCTTGACAGTTCCCACGGGCAACAAGTTCAGAGCATTCACTATAAGC
TGCCAGCGC
Transcript >Ophio5|7250
ATGATCTTCTCCTCTCTCGCCACTGCCGTCCTTCTGGCTGCCGGCTGCCAGGCTGCTGTTGTGGTCCCTCGCCTC
AGCCATCTGGCCGACTTCCGCCTCTTCAGCGGCACCAACTGCGGCCCGGAGAACCTCGGCATCTGGACCATCGTC
GAGGGCGACTTAAAGCCCGGGGAGTGCAAGGCAATCCCCGACCACAGTGTCGTCTCAATCAAGATCGAGAGCATT
TCCAAAGACTGCCAGCTCACCTTTCACAAGAATGCGGGATGCGGAACGTGGGACCCAAAACTCGGCAGGCATGAA
TGGGGATACACTATCTCCGACCGCAAATGCTTGACAGTTCCCACGGGCAACAAGTTCAGAGCATTCACTATAAGC
TGCCAGCGCTGA
Gene >Ophio5|7250
ATGATCTTCTCCTCTCTCGCCACTGCCGTCCTTCTGGCTGCCGGCTGCCAGGCTGCTGTTGTGGTCCCTCGCCTC
AGCCATCTGGCCGACTTCCGCCTCTTCAGCGGCACCAACTGCGGCCCGGAGAACCTCGGCATCTGGACCATCGTC
GAGGGCGACTTAAAGCCCGGGGAGTGCAAGGCAATCCCCGACCACAGTGTCGTCTCAATCAAGATCGAGAGCATT
TCCAAAGACTGCCAGCGTGAGTTTAACGTATCTTGTGCCGGATCATGCCAGCTAACGCCTCACAGTCACCTTTCA
CAAGAATGCGGGATGCGGAACGTGGGACCCAAAACTCGGCAGGCATGAATGGGGATACACTATCTCCGACCGCAA
ATGCTTGACAGTTCCCACGGGCAACAAGTTCAGAGCATTCACTATAAGCTGCCAGCGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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