© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|7220 |
| Gene name | |
| Location | scaffold_681:5889..6720 |
| Strand | - |
| Gene length (bp) | 831 |
| Transcript length (bp) | 735 |
| Coding sequence length (bp) | 732 |
| Protein length (aa) | 244 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13847 | Methyltransf_31 | Methyltransferase domain | 8.8E-09 | 74 | 139 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 5.1E-10 | 73 | 110 |
| PF13489 | Methyltransf_23 | Methyltransferase domain | 1.0E-09 | 32 | 116 |
| PF07021 | MetW | Methionine biosynthesis protein MetW | 7.7E-05 | 73 | 105 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13871|YE16_SCHPO | Uncharacterized methyltransferase C1B3.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.06c PE=3 SV=1 | 1 | 241 | 3.0E-43 |
| sp|Q5YPB0|MENG_NOCFA | Demethylmenaquinone methyltransferase OS=Nocardia farcinica (strain IFM 10152) GN=menG PE=3 SV=1 | 38 | 148 | 2.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 31 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|7220 MNRKSESATYTHGHHASVLRSHTWRTALNSAAHLLPHLRPDMKMLDIGCGPGTITVDFAGYVPEGHVTGMDRADE SFDMVVCHQVLQHVKDPVGVLREMRRVTKTGGFVAARESDYGTMVWYPPVQGMESWRALYEKVARWNGGEPDAGR MLHAWARKAGFSADDVACSSSTWCYSSADEVAWWSGLWAERTVESNFAKTAVEAGLSTEPELRETAEVWRRWGEQ KDAWFSFLHGEVICRKRGG |
| Coding | >Ophio5|7220 ATGAACCGCAAATCCGAATCGGCCACTTACACCCACGGCCATCATGCGTCCGTTCTTCGGTCTCATACGTGGCGA ACGGCGCTGAACTCGGCTGCCCATCTTTTGCCCCATCTGCGGCCGGACATGAAGATGCTCGATATCGGCTGCGGC CCCGGAACCATTACGGTCGATTTCGCCGGCTACGTACCGGAGGGTCATGTCACAGGCATGGATCGAGCAGACGAG AGCTTCGACATGGTCGTCTGCCACCAAGTTTTGCAACATGTCAAGGACCCCGTCGGCGTCCTGCGCGAGATGAGG CGCGTAACTAAGACGGGGGGCTTCGTAGCCGCGCGGGAGTCCGACTACGGCACCATGGTTTGGTATCCCCCCGTC CAAGGCATGGAGAGCTGGCGAGCGCTATACGAAAAGGTGGCCCGGTGGAATGGAGGCGAGCCGGATGCCGGTCGC ATGCTTCACGCCTGGGCGCGCAAGGCCGGCTTCTCGGCCGACGACGTGGCCTGCAGTTCTAGCACTTGGTGCTAC AGCTCGGCCGACGAGGTCGCCTGGTGGAGCGGCCTGTGGGCTGAGAGGACGGTCGAGTCCAACTTTGCCAAGACG GCCGTTGAGGCCGGCCTGTCGACGGAACCTGAGCTCCGGGAGACGGCCGAGGTGTGGAGGAGATGGGGGGAGCAG AAGGATGCCTGGTTTTCTTTCTTGCACGGGGAGGTGATTTGCCGTAAAAGGGGGGGC |
| Transcript | >Ophio5|7220 ATGAACCGCAAATCCGAATCGGCCACTTACACCCACGGCCATCATGCGTCCGTTCTTCGGTCTCATACGTGGCGA ACGGCGCTGAACTCGGCTGCCCATCTTTTGCCCCATCTGCGGCCGGACATGAAGATGCTCGATATCGGCTGCGGC CCCGGAACCATTACGGTCGATTTCGCCGGCTACGTACCGGAGGGTCATGTCACAGGCATGGATCGAGCAGACGAG AGCTTCGACATGGTCGTCTGCCACCAAGTTTTGCAACATGTCAAGGACCCCGTCGGCGTCCTGCGCGAGATGAGG CGCGTAACTAAGACGGGGGGCTTCGTAGCCGCGCGGGAGTCCGACTACGGCACCATGGTTTGGTATCCCCCCGTC CAAGGCATGGAGAGCTGGCGAGCGCTATACGAAAAGGTGGCCCGGTGGAATGGAGGCGAGCCGGATGCCGGTCGC ATGCTTCACGCCTGGGCGCGCAAGGCCGGCTTCTCGGCCGACGACGTGGCCTGCAGTTCTAGCACTTGGTGCTAC AGCTCGGCCGACGAGGTCGCCTGGTGGAGCGGCCTGTGGGCTGAGAGGACGGTCGAGTCCAACTTTGCCAAGACG GCCGTTGAGGCCGGCCTGTCGACGGAACCTGAGCTCCGGGAGACGGCCGAGGTGTGGAGGAGATGGGGGGAGCAG AAGGATGCCTGGTTTTCTTTCTTGCACGGGGAGGTGATTTGCCGTAAAAGGGGGGGCTGA |
| Gene | >Ophio5|7220 ATGAACCGCAAATCCGAATCGGCCACTTACACCCACGGCCATCATGCGTCCGTTCTTCGGTCTCATACGTGGCGA ACGGCGCTGAACTCGGCTGCCCATCTTTTGCCCCATCTGCGGCCGGACATGAAGATGCTCGATATCGGCTGCGGC CCCGGAACCATTACGGTCGATTTCGCCGGCTACGTACCGGAGGGTCATGTCACAGGCATGGATCGAGCAGGTCAA GTGCTCGACCAAGCGCGTGCTCTGGCAGCGGAGCGAGGCCTAACGAACATTGACTTCGTCGAGGGAGACGCAAAC GGTCTAGACTACGCAGACGAGAGCTTCGACATGGTCGTCTGCCACCAAGTTTTGCAACATGTCAAGGACCCCGTC GGCGTCCTGCGCGAGATGAGGCGCGTAACTAAGACGGGGGGCTTCGTAGCCGCGCGGGAGTCCGACTACGGCACC ATGGTTTGGTATCCCCCCGTCCAAGGCATGGAGAGCTGGCGAGCGCTATACGAAAAGGTGGCCCGGTGGAATGGA GGCGAGCCGGATGCCGGTCGCATGCTTCACGCCTGGGCGCGCAAGGCCGGCTTCTCGGCCGACGACGTGGCCTGC AGTTCTAGCACTTGGTGCTACAGCTCGGCCGACGAGGTCGCCTGGTGGAGCGGCCTGTGGGCTGAGAGGACGGTC GAGTCCAACTTTGCCAAGACGGCCGTTGAGGCCGGCCTGTCGACGGAACCTGAGCTCCGGGAGACGGCCGAGGTG TGGAGGAGATGGGGGGAGCAGAAGGATGCCTGGTTTTCTTTCTTGCACGGGGAGGTGATTTGCCGTAAAAGGGGG GGCTGA |