Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7210
Gene name
Locationscaffold_68:40037..40767
Strand-
Gene length (bp)730
Transcript length (bp)621
Coding sequence length (bp)618
Protein length (aa) 206

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00293 NUDIX NUDIX domain 1.6E-16 56 173

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q01976|ADPP_YEAST ADP-ribose pyrophosphatase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YSA1 PE=1 SV=2 18 206 3.0E-65
sp|Q9P791|YN8C_SCHPO Uncharacterized Nudix hydrolase P35G2.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP35G2.12 PE=3 SV=1 7 197 1.0E-55
sp|Q9UKK9|NUDT5_HUMAN ADP-sugar pyrophosphatase OS=Homo sapiens GN=NUDT5 PE=1 SV=1 18 194 3.0E-41
sp|Q5RCY2|NUDT5_PONAB ADP-sugar pyrophosphatase OS=Pongo abelii GN=NUDT5 PE=2 SV=1 18 194 1.0E-39
sp|O61902|NDX2_CAEEL Putative nudix hydrolase 2 OS=Caenorhabditis elegans GN=ndx-2 PE=3 SV=1 19 200 1.0E-37
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q01976|ADPP_YEAST ADP-ribose pyrophosphatase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YSA1 PE=1 SV=2 18 206 3.0E-65
sp|Q9P791|YN8C_SCHPO Uncharacterized Nudix hydrolase P35G2.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP35G2.12 PE=3 SV=1 7 197 1.0E-55
sp|Q9UKK9|NUDT5_HUMAN ADP-sugar pyrophosphatase OS=Homo sapiens GN=NUDT5 PE=1 SV=1 18 194 3.0E-41
sp|Q5RCY2|NUDT5_PONAB ADP-sugar pyrophosphatase OS=Pongo abelii GN=NUDT5 PE=2 SV=1 18 194 1.0E-39
sp|O61902|NDX2_CAEEL Putative nudix hydrolase 2 OS=Caenorhabditis elegans GN=ndx-2 PE=3 SV=1 19 200 1.0E-37
sp|Q6AY63|NUDT5_RAT ADP-sugar pyrophosphatase OS=Rattus norvegicus GN=Nudt5 PE=2 SV=1 18 194 4.0E-36
sp|Q9JKX6|NUDT5_MOUSE ADP-sugar pyrophosphatase OS=Mus musculus GN=Nudt5 PE=1 SV=1 18 190 2.0E-35
sp|P54570|ADPP_BACSU ADP-ribose pyrophosphatase OS=Bacillus subtilis (strain 168) GN=nudF PE=1 SV=1 55 169 1.0E-15
sp|Q8KP10|ACT_BACMT Methanol dehydrogenase activator OS=Bacillus methanolicus GN=act PE=1 SV=1 55 178 1.0E-11
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7210
MAVSSCKALSRGPLPDDEARWIQLAKVTYQDPHGATRTWESAERRTRPAGSDIDGVGIVALLDDPSGKQHIVLQK
QYRPPIDKVTIELPAGLIDAGETPEQAAVRELREETGYVGVPSLTSPVMFNDPGFCNTNLRLIHVTVDMSLPENR
DPKPQLEENEFIDVFTVPLAALWDECKELEAQGCAVDARVGTLAEGILLAKQLKLR
Coding >Ophio5|7210
ATGGCCGTCTCCAGCTGCAAGGCGCTCTCCCGCGGGCCTCTGCCCGACGACGAGGCCCGCTGGATTCAGCTCGCC
AAAGTCACCTACCAAGATCCCCACGGGGCAACGCGCACCTGGGAATCTGCTGAGCGCCGTACGCGACCTGCCGGC
TCCGACATCGACGGCGTCGGGATCGTCGCTCTTCTCGACGACCCCTCTGGAAAGCAGCACATCGTCCTGCAGAAG
CAGTACCGCCCGCCCATCGATAAAGTCACCATTGAGCTTCCCGCCGGCCTCATTGACGCCGGAGAGACACCCGAG
CAGGCGGCCGTGCGCGAACTCCGCGAGGAGACGGGCTACGTCGGCGTGCCCAGCTTGACATCGCCCGTCATGTTC
AATGACCCGGGCTTCTGCAACACGAACCTGCGCCTGATCCACGTCACTGTCGACATGTCCCTACCGGAGAACCGA
GACCCAAAGCCGCAGCTCGAGGAAAACGAATTCATCGACGTCTTCACCGTACCCCTGGCCGCCCTATGGGATGAG
TGCAAGGAACTCGAAGCTCAAGGGTGCGCCGTGGACGCTAGGGTCGGCACTCTGGCTGAGGGAATCCTGCTAGCC
AAGCAGCTGAAGCTGAGG
Transcript >Ophio5|7210
ATGGCCGTCTCCAGCTGCAAGGCGCTCTCCCGCGGGCCTCTGCCCGACGACGAGGCCCGCTGGATTCAGCTCGCC
AAAGTCACCTACCAAGATCCCCACGGGGCAACGCGCACCTGGGAATCTGCTGAGCGCCGTACGCGACCTGCCGGC
TCCGACATCGACGGCGTCGGGATCGTCGCTCTTCTCGACGACCCCTCTGGAAAGCAGCACATCGTCCTGCAGAAG
CAGTACCGCCCGCCCATCGATAAAGTCACCATTGAGCTTCCCGCCGGCCTCATTGACGCCGGAGAGACACCCGAG
CAGGCGGCCGTGCGCGAACTCCGCGAGGAGACGGGCTACGTCGGCGTGCCCAGCTTGACATCGCCCGTCATGTTC
AATGACCCGGGCTTCTGCAACACGAACCTGCGCCTGATCCACGTCACTGTCGACATGTCCCTACCGGAGAACCGA
GACCCAAAGCCGCAGCTCGAGGAAAACGAATTCATCGACGTCTTCACCGTACCCCTGGCCGCCCTATGGGATGAG
TGCAAGGAACTCGAAGCTCAAGGGTGCGCCGTGGACGCTAGGGTCGGCACTCTGGCTGAGGGAATCCTGCTAGCC
AAGCAGCTGAAGCTGAGGTGA
Gene >Ophio5|7210
ATGGCCGTCTCCAGCTGCAAGGCGCTCTCCCGCGGGCCTCTGGTGCGTCTCTGAAGCTCTGGGCCGCCACCTCAT
CGCTAACCGACAACAACCAGCCCGACGACGAGGCCCGCTGGATTCAGCTCGCCAAGTGAGCGGCCCCGATCAGCA
GACACCCGTCAAGCCCGACTGATTCGCGATCCGCAGAGTCACCTACCAAGATCCCCACGGGGCAACGCGCACCTG
GGAATCTGCTGAGCGCCGTACGCGACCTGCCGGCTCCGACATCGACGGCGTCGGGATCGTCGCTCTTCTCGACGA
CCCCTCTGGAAAGCAGCACATCGTCCTGCAGAAGCAGTACCGCCCGCCCATCGATAAAGTCACCATTGAGCTTCC
CGCCGGCCTCATTGACGCCGGAGAGACACCCGAGCAGGCGGCCGTGCGCGAACTCCGCGAGGAGACGGGCTACGT
CGGCGTGCCCAGCTTGACATCGCCCGTCATGTTCAATGACCCGGGCTTCTGCAACACGAACCTGCGCCTGATCCA
CGTCACTGTCGACATGTCCCTACCGGAGAACCGAGACCCAAAGCCGCAGCTCGAGGAAAACGAATTCATCGACGT
CTTCACCGTACCCCTGGCCGCCCTATGGGATGAGTGCAAGGAACTCGAAGCTCAAGGGTGCGCCGTGGACGCTAG
GGTCGGCACTCTGGCTGAGGGAATCCTGCTAGCCAAGCAGCTGAAGCTGAGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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