Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7188
Gene name
Locationscaffold_678:4497..5579
Strand-
Gene length (bp)1082
Transcript length (bp)999
Coding sequence length (bp)996
Protein length (aa) 332

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04143 Sulf_transp Sulphur transport 2.8E-28 26 325

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 39 61 22
3 82 104 22
4 114 136 22
5 157 179 22
6 189 208 19
7 247 269 22
8 279 301 22
9 306 328 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7188
MAIVAATVSGAAFGAAMTTAGFHDASLIIAQMKLESWHMLQAFMAATASSAACYCLVQRLLHVEMPPPSASSLGL
FASHDGNVIGGVLLGAGIALSGSCPGALFAQLAVGGRAAYFTLAGAVTGAVVWAGNMGELVRHRQRRPNSGLDMP
AQQRPGLSRATWLLLLQTVCLTVVAMAAGLAPSSPRGRVSGAVAGLLIGFAQLVSLLARRSMLGASGSYQEAGNL
LRRLAAAGSSPDIKSKYHGPRLAFAFGAVAGAWLLLRAAPSLVVVPVFEAPPLLAAVGGFLMIVGAAVAGGCTSG
HGISGIALLSVPSIVTMAGAFAAGVTVAPLAY
Coding >Ophio5|7188
ATGGCCATCGTCGCCGCCACCGTTTCGGGCGCCGCCTTCGGAGCCGCCATGACCACCGCTGGCTTCCACGATGCC
TCGCTCATCATCGCCCAGATGAAGCTCGAGAGTTGGCACATGCTTCAAGCTTTCATGGCCGCCACGGCAAGCAGC
GCCGCCTGCTATTGCCTCGTCCAGAGACTGCTTCACGTCGAGATGCCGCCGCCATCTGCCTCTTCATTGGGCCTT
TTCGCCAGCCATGATGGCAACGTCATCGGCGGCGTCTTGCTCGGTGCTGGCATCGCCCTTTCCGGCTCATGTCCC
GGCGCGCTGTTCGCTCAGCTTGCCGTCGGGGGACGGGCTGCCTACTTCACTCTCGCGGGGGCCGTCACCGGCGCC
GTTGTATGGGCCGGCAACATGGGCGAGCTGGTGCGGCACCGGCAGCGGAGGCCAAATTCGGGACTCGACATGCCT
GCTCAGCAACGGCCCGGTCTCTCGAGAGCCACATGGCTGCTCCTCCTTCAGACGGTCTGCCTCACCGTAGTGGCC
ATGGCGGCCGGCCTCGCGCCGTCGAGCCCACGCGGCCGAGTGAGCGGAGCCGTTGCCGGTTTGCTCATCGGCTTC
GCCCAGCTCGTCTCTCTCCTAGCGCGGCGGTCCATGCTCGGCGCATCCGGCTCATACCAAGAAGCCGGCAACTTG
CTCCGTCGCCTGGCTGCTGCTGGTTCAAGCCCTGACATCAAGTCCAAATACCATGGTCCGAGGCTCGCCTTCGCC
TTTGGCGCTGTTGCCGGCGCCTGGCTGCTCCTGCGCGCGGCTCCGTCTTTGGTCGTCGTCCCCGTCTTCGAGGCC
CCGCCGCTGCTCGCCGCCGTCGGGGGCTTTCTCATGATCGTCGGGGCAGCGGTGGCGGGCGGCTGCACGTCTGGG
CATGGCATCAGCGGCATCGCGCTGCTCTCCGTCCCCAGCATCGTGACCATGGCCGGTGCTTTTGCGGCGGGAGTA
ACGGTGGCGCCGTTGGCGTAC
Transcript >Ophio5|7188
ATGGCCATCGTCGCCGCCACCGTTTCGGGCGCCGCCTTCGGAGCCGCCATGACCACCGCTGGCTTCCACGATGCC
TCGCTCATCATCGCCCAGATGAAGCTCGAGAGTTGGCACATGCTTCAAGCTTTCATGGCCGCCACGGCAAGCAGC
GCCGCCTGCTATTGCCTCGTCCAGAGACTGCTTCACGTCGAGATGCCGCCGCCATCTGCCTCTTCATTGGGCCTT
TTCGCCAGCCATGATGGCAACGTCATCGGCGGCGTCTTGCTCGGTGCTGGCATCGCCCTTTCCGGCTCATGTCCC
GGCGCGCTGTTCGCTCAGCTTGCCGTCGGGGGACGGGCTGCCTACTTCACTCTCGCGGGGGCCGTCACCGGCGCC
GTTGTATGGGCCGGCAACATGGGCGAGCTGGTGCGGCACCGGCAGCGGAGGCCAAATTCGGGACTCGACATGCCT
GCTCAGCAACGGCCCGGTCTCTCGAGAGCCACATGGCTGCTCCTCCTTCAGACGGTCTGCCTCACCGTAGTGGCC
ATGGCGGCCGGCCTCGCGCCGTCGAGCCCACGCGGCCGAGTGAGCGGAGCCGTTGCCGGTTTGCTCATCGGCTTC
GCCCAGCTCGTCTCTCTCCTAGCGCGGCGGTCCATGCTCGGCGCATCCGGCTCATACCAAGAAGCCGGCAACTTG
CTCCGTCGCCTGGCTGCTGCTGGTTCAAGCCCTGACATCAAGTCCAAATACCATGGTCCGAGGCTCGCCTTCGCC
TTTGGCGCTGTTGCCGGCGCCTGGCTGCTCCTGCGCGCGGCTCCGTCTTTGGTCGTCGTCCCCGTCTTCGAGGCC
CCGCCGCTGCTCGCCGCCGTCGGGGGCTTTCTCATGATCGTCGGGGCAGCGGTGGCGGGCGGCTGCACGTCTGGG
CATGGCATCAGCGGCATCGCGCTGCTCTCCGTCCCCAGCATCGTGACCATGGCCGGTGCTTTTGCGGCGGGAGTA
ACGGTGGCGCCGTTGGCGTACTAG
Gene >Ophio5|7188
ATGGCCATCGTCGCCGCCACCGTTTCGGGCGCCGCCTTCGGAGCCGCCATGACCACCGCTGGCTTCCACGATGCC
TCGCTCATCATCGCCCAGATGAAGCTCGAGAGTTGGCACATGCTTCAAGCTTTCATGGCCGCCACGGCAAGCAGC
GCGTAAAAACACCCCCCAAACGTCCCAACACTTTCCGTCAGCCCTCGCTAAGACTCTCGTCTCTCTTGTTTTCCC
CCCTCTGCAGCGCCTGCTATTGCCTCGTCCAGAGACTGCTTCACGTCGAGATGCCGCCGCCATCTGCCTCTTCAT
TGGGCCTTTTCGCCAGCCATGATGGCAACGTCATCGGCGGCGTCTTGCTCGGTGCTGGCATCGCCCTTTCCGGCT
CATGTCCCGGCGCGCTGTTCGCTCAGCTTGCCGTCGGGGGACGGGCTGCCTACTTCACTCTCGCGGGGGCCGTCA
CCGGCGCCGTTGTATGGGCCGGCAACATGGGCGAGCTGGTGCGGCACCGGCAGCGGAGGCCAAATTCGGGACTCG
ACATGCCTGCTCAGCAACGGCCCGGTCTCTCGAGAGCCACATGGCTGCTCCTCCTTCAGACGGTCTGCCTCACCG
TAGTGGCCATGGCGGCCGGCCTCGCGCCGTCGAGCCCACGCGGCCGAGTGAGCGGAGCCGTTGCCGGTTTGCTCA
TCGGCTTCGCCCAGCTCGTCTCTCTCCTAGCGCGGCGGTCCATGCTCGGCGCATCCGGCTCATACCAAGAAGCCG
GCAACTTGCTCCGTCGCCTGGCTGCTGCTGGTTCAAGCCCTGACATCAAGTCCAAATACCATGGTCCGAGGCTCG
CCTTCGCCTTTGGCGCTGTTGCCGGCGCCTGGCTGCTCCTGCGCGCGGCTCCGTCTTTGGTCGTCGTCCCCGTCT
TCGAGGCCCCGCCGCTGCTCGCCGCCGTCGGGGGCTTTCTCATGATCGTCGGGGCAGCGGTGGCGGGCGGCTGCA
CGTCTGGGCATGGCATCAGCGGCATCGCGCTGCTCTCCGTCCCCAGCATCGTGACCATGGCCGGTGCTTTTGCGG
CGGGAGTAACGGTGGCGCCGTTGGCGTACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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