Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7175
Gene name
Locationscaffold_674:4284..5050
Strand+
Gene length (bp)766
Transcript length (bp)411
Coding sequence length (bp)408
Protein length (aa) 136

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14138 COX16 Cytochrome c oxidase assembly protein COX16 8.9E-29 32 107

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q4I8P5|COX16_GIBZE Cytochrome c oxidase assembly protein COX16, mitochondrial OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=COX16 PE=3 SV=1 1 113 4.0E-48
sp|Q7SI11|COX16_NEUCR Cytochrome c oxidase assembly protein cox16, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cox-9 PE=3 SV=1 3 103 1.0E-40
sp|Q0UIR3|COX16_PHANO Cytochrome c oxidase assembly protein COX16, mitochondrial OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=COX16 PE=3 SV=2 16 113 2.0E-34
sp|Q1DME3|COX16_COCIM Cytochrome c oxidase assembly protein COX16, mitochondrial OS=Coccidioides immitis (strain RS) GN=COX16 PE=3 SV=1 1 103 9.0E-31
sp|A1C8Z3|COX16_ASPCL Cytochrome c oxidase assembly protein cox16, mitochondrial OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=cox16 PE=3 SV=2 1 103 2.0E-30
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Swissprot ID Swissprot Description Start End E-value
sp|Q4I8P5|COX16_GIBZE Cytochrome c oxidase assembly protein COX16, mitochondrial OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=COX16 PE=3 SV=1 1 113 4.0E-48
sp|Q7SI11|COX16_NEUCR Cytochrome c oxidase assembly protein cox16, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cox-9 PE=3 SV=1 3 103 1.0E-40
sp|Q0UIR3|COX16_PHANO Cytochrome c oxidase assembly protein COX16, mitochondrial OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=COX16 PE=3 SV=2 16 113 2.0E-34
sp|Q1DME3|COX16_COCIM Cytochrome c oxidase assembly protein COX16, mitochondrial OS=Coccidioides immitis (strain RS) GN=COX16 PE=3 SV=1 1 103 9.0E-31
sp|A1C8Z3|COX16_ASPCL Cytochrome c oxidase assembly protein cox16, mitochondrial OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=cox16 PE=3 SV=2 1 103 2.0E-30
sp|Q52ZA1|COX16_PARBD Cytochrome c oxidase assembly protein COX16, mitochondrial OS=Paracoccidioides brasiliensis (strain Pb18) GN=COX16 PE=2 SV=1 3 103 9.0E-30
sp|Q5AXJ9|COX16_EMENI Cytochrome c oxidase assembly protein cox16, mitochondrial OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cox16 PE=3 SV=2 1 103 3.0E-29
sp|Q2PIY2|COX16_ASPOR Cytochrome c oxidase assembly protein cox16, mitochondrial OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=cox16 PE=3 SV=1 1 103 3.0E-28
sp|P47081|COX16_YEAST Cytochrome c oxidase assembly protein COX16, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COX16 PE=1 SV=1 17 115 1.0E-24
sp|Q6CK73|COX16_KLULA Cytochrome c oxidase assembly protein COX16, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=COX16 PE=3 SV=1 17 103 3.0E-22
sp|Q75FA7|COX16_ASHGO Cytochrome c oxidase assembly protein COX16, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=COX16 PE=3 SV=1 3 113 4.0E-20
sp|Q6FW43|COX16_CANGA Cytochrome c oxidase assembly protein COX16, mitochondrial OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=COX16 PE=3 SV=1 17 103 1.0E-19
sp|Q6CCF6|COX16_YARLI Cytochrome c oxidase assembly protein COX16, mitochondrial OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=COX16 PE=3 SV=1 4 103 4.0E-18
sp|P0CM84|COX16_CRYNJ Cytochrome c oxidase assembly protein COX16, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=COX16 PE=3 SV=1 1 88 1.0E-17
sp|P0CM85|COX16_CRYNB Cytochrome c oxidase assembly protein COX16, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=COX16 PE=3 SV=1 1 88 1.0E-17
sp|Q6BY05|COX16_DEBHA Cytochrome c oxidase assembly protein COX16, mitochondrial OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=COX16 PE=3 SV=1 9 93 4.0E-17
sp|Q5ACH7|COX16_CANAL Cytochrome c oxidase assembly protein COX16, mitochondrial OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=COX16 PE=3 SV=1 9 93 6.0E-16
sp|Q9UTK1|COX16_SCHPO Cytochrome c oxidase assembly protein cox16, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cox16 PE=3 SV=1 16 119 3.0E-10
sp|Q9CR63|COX16_MOUSE Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial OS=Mus musculus GN=Cox16 PE=3 SV=1 25 107 4.0E-06
sp|Q2NKS2|COX16_BOVIN Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial OS=Bos taurus GN=COX16 PE=3 SV=1 19 107 6.0E-06
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GO

GO Term Description Terminal node
GO:0031966 mitochondrial membrane Yes
GO:0110165 cellular anatomical entity No
GO:0016020 membrane No
GO:0005575 cellular_component No
GO:0031090 organelle membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 37 0.5

Transmembrane Domains

Domain # Start End Length
1 31 50 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7175
MPTFQRNRFRGSADAHSLGSRYRVALRKHPFLAFGLPFISVIVAGSFVLTKATAVRYERHDRKVRQMSKEEELGM
RKGGRRVDMRDEYNRLAGRDFEKWEQKRPFRPAPGEAEAEAEAAAAAAANGKEVVGSGQKF
Coding >Ophio5|7175
ATGCCGACCTTCCAGCGCAACCGGTTCCGCGGCTCGGCCGATGCCCACAGCCTCGGTTCGCGGTATCGTGTGGCG
TTGCGCAAGCACCCGTTCCTAGCCTTTGGCCTGCCCTTCATCTCCGTCATCGTCGCCGGCTCTTTTGTCCTAACG
AAGGCGACGGCGGTGCGTTACGAGCGACACGATCGAAAGGTGCGGCAGATGAGCAAAGAGGAGGAATTGGGGATG
CGCAAGGGCGGGAGAAGGGTGGACATGCGGGATGAGTATAACAGGCTCGCCGGCAGGGATTTCGAAAAGTGGGAG
CAGAAACGGCCCTTTCGCCCTGCTCCTGGTGAGGCGGAGGCGGAGGCGGAGGCGGCGGCGGCGGCGGCGGCGAAT
GGAAAGGAGGTGGTGGGATCGGGCCAGAAGTTC
Transcript >Ophio5|7175
ATGCCGACCTTCCAGCGCAACCGGTTCCGCGGCTCGGCCGATGCCCACAGCCTCGGTTCGCGGTATCGTGTGGCG
TTGCGCAAGCACCCGTTCCTAGCCTTTGGCCTGCCCTTCATCTCCGTCATCGTCGCCGGCTCTTTTGTCCTAACG
AAGGCGACGGCGGTGCGTTACGAGCGACACGATCGAAAGGTGCGGCAGATGAGCAAAGAGGAGGAATTGGGGATG
CGCAAGGGCGGGAGAAGGGTGGACATGCGGGATGAGTATAACAGGCTCGCCGGCAGGGATTTCGAAAAGTGGGAG
CAGAAACGGCCCTTTCGCCCTGCTCCTGGTGAGGCGGAGGCGGAGGCGGAGGCGGCGGCGGCGGCGGCGGCGAAT
GGAAAGGAGGTGGTGGGATCGGGCCAGAAGTTCTGA
Gene >Ophio5|7175
ATGCCGACCTTCCAGCGCAACCGGTTCCGCGGCTCGGCCGATGCCCACAGCCTCGGTTCGCGGTATCGTGTGGCG
TTGCGCAAGCACCCGTTCCTAGCCTTTGGCCTGCCCTTCATCTCCGTCATCGTCGCCGGCTCTTTTGTCCTAACG
AAGGCGACGGCGGTGCGTTACGAGCGACACGATCGAAAGGTGCGGCAGATGAGCAAAGAGGAGGAATTGGGGATG
CGCAAGGGCGGGAGAAGGGTGGACATGCGGGATGAGTATAACGTACGTTTTGCCTCCCGTTGTTGCTTGCCAAGA
ACAGTACTACTTTCTTTCTTTCTTTCTGGATTTCCCTTGCTTGTCTACCAGCAGGTTGATACTGGCGCGAATCGG
CTGCTGAACAGCGCATCTTGCTTTCCCCTTTCCTTTCCGTTTCACACACAAAACAAAAACTACACACGTGGCTCG
CAGGGAGCGCTAAATCGAAGATTCATAGAGGCTCGCCGGCAGGGATTTCGAAAAGTGGGAGCAGAAACGTGTCGA
AAGGCTGCCAGGCGAGAGTGATGGCATCTTGAGATGATAATGACGCCAACTTGTCTCATTTCTTCTTCTTAGATC
ATGAATACCGACGTCATACCGGCTATTATTATCCGGCCAAGAACAATACACAACACATTCAGGGCCCTTTCGCCC
TGCTCCTGGTGAGGCGGAGGCGGAGGCGGAGGCGGCGGCGGCGGCGGCGGCGAATGGAAAGGAGGTGGTGGGATC
GGGCCAGAAGTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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