Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|7165
Gene name
Location	scaffold_671:9083..9596
Strand	+
Gene length (bp)	513
Transcript length (bp)	513
Coding sequence length (bp)	510
Protein length (aa)	170

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12296	HsbA	Hydrophobic surface binding protein A	1.4E-15	23	140

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 21	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|7165 MHFLSTSTLALLALANTALGAGAVHSSMSKINNDMLATDRSVSSWAGNLLTVAPVLMRANSLMGSLKAGTDATKN AGNLTADEAKNVLDMVTESGNSARQLSDTLVGAKSKFSQIPLADVFVAGLMDAFAKRTQEFGAALNDKMPEAKER VSAAFESVQDSIGDAAKAYA
Coding	>Ophio5\|7165 ATGCACTTCCTCTCCACCAGCACCCTTGCCCTCTTGGCACTGGCAAACACCGCTCTCGGCGCGGGAGCCGTCCAC TCGAGCATGAGCAAGATCAACAACGACATGCTCGCCACCGACCGCAGCGTCAGCAGCTGGGCCGGCAACCTACTT ACCGTAGCCCCCGTCCTGATGAGGGCCAACAGTCTGATGGGAAGCCTCAAGGCCGGCACGGATGCGACCAAGAAC GCCGGGAACCTGACGGCTGACGAGGCCAAAAATGTTTTGGATATGGTCACGGAATCCGGCAACAGCGCTCGCCAG CTCTCCGACACTCTCGTCGGTGCCAAATCCAAATTCAGCCAGATTCCGCTTGCGGATGTCTTCGTTGCCGGTCTC ATGGATGCCTTCGCTAAGAGGACTCAAGAGTTTGGAGCCGCGCTCAACGACAAGATGCCCGAGGCCAAGGAGCGC GTTTCCGCTGCCTTTGAGAGTGTTCAAGATAGCATCGGAGATGCGGCCAAGGCCTACGCC
Transcript	>Ophio5\|7165 ATGCACTTCCTCTCCACCAGCACCCTTGCCCTCTTGGCACTGGCAAACACCGCTCTCGGCGCGGGAGCCGTCCAC TCGAGCATGAGCAAGATCAACAACGACATGCTCGCCACCGACCGCAGCGTCAGCAGCTGGGCCGGCAACCTACTT ACCGTAGCCCCCGTCCTGATGAGGGCCAACAGTCTGATGGGAAGCCTCAAGGCCGGCACGGATGCGACCAAGAAC GCCGGGAACCTGACGGCTGACGAGGCCAAAAATGTTTTGGATATGGTCACGGAATCCGGCAACAGCGCTCGCCAG CTCTCCGACACTCTCGTCGGTGCCAAATCCAAATTCAGCCAGATTCCGCTTGCGGATGTCTTCGTTGCCGGTCTC ATGGATGCCTTCGCTAAGAGGACTCAAGAGTTTGGAGCCGCGCTCAACGACAAGATGCCCGAGGCCAAGGAGCGC GTTTCCGCTGCCTTTGAGAGTGTTCAAGATAGCATCGGAGATGCGGCCAAGGCCTACGCCTGA
Gene	>Ophio5\|7165 ATGCACTTCCTCTCCACCAGCACCCTTGCCCTCTTGGCACTGGCAAACACCGCTCTCGGCGCGGGAGCCGTCCAC TCGAGCATGAGCAAGATCAACAACGACATGCTCGCCACCGACCGCAGCGTCAGCAGCTGGGCCGGCAACCTACTT ACCGTAGCCCCCGTCCTGATGAGGGCCAACAGTCTGATGGGAAGCCTCAAGGCCGGCACGGATGCGACCAAGAAC GCCGGGAACCTGACGGCTGACGAGGCCAAAAATGTTTTGGATATGGTCACGGAATCCGGCAACAGCGCTCGCCAG CTCTCCGACACTCTCGTCGGTGCCAAATCCAAATTCAGCCAGATTCCGCTTGCGGATGTCTTCGTTGCCGGTCTC ATGGATGCCTTCGCTAAGAGGACTCAAGAGTTTGGAGCCGCGCTCAACGACAAGATGCCCGAGGCCAAGGAGCGC GTTTCCGCTGCCTTTGAGAGTGTTCAAGATAGCATCGGAGATGCGGCCAAGGCCTACGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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