Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7160
Gene name
Locationscaffold_670:5138..6639
Strand-
Gene length (bp)1501
Transcript length (bp)1368
Coding sequence length (bp)1365
Protein length (aa) 455

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09273 Rubis-subs-bind Rubisco LSMT substrate-binding 8.2E-19 265 388
PF00856 SET SET domain 2.3E-13 25 234
PF01753 zf-MYND MYND finger 7.3E-10 410 448

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|C1FXW2|SETD3_DASNO Histone-lysine N-methyltransferase setd3 OS=Dasypus novemcinctus GN=SETD3 PE=3 SV=1 4 395 7.0E-34
sp|B2KI88|SETD3_RHIFE Histone-lysine N-methyltransferase setd3 OS=Rhinolophus ferrumequinum GN=SETD3 PE=3 SV=1 4 395 8.0E-34
sp|B5FW36|SETD3_OTOGA Histone-lysine N-methyltransferase setd3 OS=Otolemur garnettii GN=SETD3 PE=3 SV=1 4 395 1.0E-33
sp|B1MTJ4|SETD3_CALMO Histone-lysine N-methyltransferase setd3 OS=Callicebus moloch GN=SETD3 PE=3 SV=2 4 395 2.0E-33
sp|A9X1D0|SETD3_PAPAN Histone-lysine N-methyltransferase setd3 OS=Papio anubis GN=SETD3 PE=3 SV=1 4 395 2.0E-33
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Swissprot ID Swissprot Description Start End E-value
sp|C1FXW2|SETD3_DASNO Histone-lysine N-methyltransferase setd3 OS=Dasypus novemcinctus GN=SETD3 PE=3 SV=1 4 395 7.0E-34
sp|B2KI88|SETD3_RHIFE Histone-lysine N-methyltransferase setd3 OS=Rhinolophus ferrumequinum GN=SETD3 PE=3 SV=1 4 395 8.0E-34
sp|B5FW36|SETD3_OTOGA Histone-lysine N-methyltransferase setd3 OS=Otolemur garnettii GN=SETD3 PE=3 SV=1 4 395 1.0E-33
sp|B1MTJ4|SETD3_CALMO Histone-lysine N-methyltransferase setd3 OS=Callicebus moloch GN=SETD3 PE=3 SV=2 4 395 2.0E-33
sp|A9X1D0|SETD3_PAPAN Histone-lysine N-methyltransferase setd3 OS=Papio anubis GN=SETD3 PE=3 SV=1 4 395 2.0E-33
sp|Q86TU7|SETD3_HUMAN Histone-lysine N-methyltransferase setd3 OS=Homo sapiens GN=SETD3 PE=1 SV=1 4 395 3.0E-33
sp|E2RBS6|SETD3_CANLF Histone-lysine N-methyltransferase setd3 OS=Canis lupus familiaris GN=SETD3 PE=3 SV=1 4 395 4.0E-33
sp|Q91WC0|SETD3_MOUSE Histone-lysine N-methyltransferase setd3 OS=Mus musculus GN=Setd3 PE=1 SV=1 4 395 5.0E-33
sp|B0VX69|SETD3_CALJA Histone-lysine N-methyltransferase setd3 OS=Callithrix jacchus GN=SETD3 PE=3 SV=2 4 395 8.0E-33
sp|B7ZUF3|SETD3_XENTR Histone-lysine N-methyltransferase setd3 OS=Xenopus tropicalis GN=setd3 PE=2 SV=1 4 397 8.0E-31
sp|Q5ZML9|SETD3_CHICK Histone-lysine N-methyltransferase setd3 OS=Gallus gallus GN=SETD3 PE=2 SV=1 4 395 3.0E-29
sp|Q7SXS7|SETD3_DANRE Histone-lysine N-methyltransferase setd3 OS=Danio rerio GN=setd3 PE=1 SV=1 3 391 2.0E-28
sp|Q43088|RBCMT_PEA Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Pisum sativum GN=RBCMT PE=1 SV=1 4 309 3.0E-27
sp|P94026|RBCMT_TOBAC Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum GN=RBCMT PE=2 SV=1 25 390 4.0E-23
sp|Q9XI84|RBCMT_ARATH [Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic OS=Arabidopsis thaliana GN=LSMT-L PE=1 SV=1 4 397 5.0E-22
sp|P58467|SETD4_MOUSE SET domain-containing protein 4 OS=Mus musculus GN=Setd4 PE=2 SV=1 1 267 1.0E-17
sp|Q9NVD3|SETD4_HUMAN SET domain-containing protein 4 OS=Homo sapiens GN=SETD4 PE=2 SV=1 1 254 7.0E-15
sp|Q5ZK17|SETD6_CHICK N-lysine methyltransferase SETD6 OS=Gallus gallus GN=SETD6 PE=2 SV=2 23 273 8.0E-11
sp|O74738|SET10_SCHPO Ribosomal lysine N-methyltransferase set10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=set10 PE=3 SV=1 60 351 2.0E-10
sp|Q803K4|SETD6_DANRE N-lysine methyltransferase setd6 OS=Danio rerio GN=setd6 PE=2 SV=1 27 259 7.0E-10
sp|C0H8I2|SETD6_SALSA N-lysine methyltransferase setd6 OS=Salmo salar GN=setd6 PE=2 SV=1 23 271 3.0E-09
sp|E1BI64|SETD6_BOVIN N-lysine methyltransferase SETD6 OS=Bos taurus GN=SETD6 PE=2 SV=1 23 390 2.0E-08
sp|Q5FWU8|ZMY10_XENLA Zinc finger MYND domain-containing protein 10 OS=Xenopus laevis GN=zmynd10 PE=2 SV=1 381 448 7.0E-08
sp|Q9CWY3|SETD6_MOUSE N-lysine methyltransferase SETD6 OS=Mus musculus GN=Setd6 PE=1 SV=1 109 263 8.0E-08
sp|Q12504|RKM4_YEAST Ribosomal lysine N-methyltransferase 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RKM4 PE=1 SV=1 4 274 1.0E-07
sp|D3ZSK5|SETD6_RAT N-lysine methyltransferase SETD6 OS=Rattus norvegicus GN=Setd6 PE=3 SV=1 109 259 8.0E-07
sp|Q8TBK2|SETD6_HUMAN N-lysine methyltransferase SETD6 OS=Homo sapiens GN=SETD6 PE=1 SV=2 23 263 1.0E-06
sp|Q6INM2|SETD6_XENLA N-lysine methyltransferase setd6 OS=Xenopus laevis GN=setd6 PE=2 SV=1 23 269 2.0E-06
sp|Q84JF5|PTA14_ARATH Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 OS=Arabidopsis thaliana GN=PTAC14 PE=1 SV=1 63 256 5.0E-06
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 57 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7160
MEAWLKQSGAFGVDGIEVADFPVTGRGVKALRSFKEGDCILTIPSACLWKVEGARADPLLGPVLRSARPPLSVED
TLAVYLLFVKSRTSGYEGRRHHIAAIPQSYSASIFFTDDELRVCEGSSLFTLTSQLEQRVQDDYRRLHVRLLSQH
RDLFPPDHFTMEDYKWALCSVWSRAMDFAVSETTSVRLVAPLADMLNHSLDAKQCHAYDPKSGDLSILAAKDYQV
GDQIFISYGSVPNNRLLRLYGFVLPDNPNDSYDLVLQTSPMAPLYEQKERLWALAGLGSTCTISLTPKVPLPNSV
LRYLRIQRLDESNITDMTLQLVNGTDGKISDENEMQVLQFLVDSIDILLESFVIPLEKLEAKLAGEDYPAGGNAW
AAAQVSAGEQRILTRAKKSAEDLLEAIFRPPATQCANCGNRSGALMSCGRCKAVKYCKRECQVAHFKDHRAACRT
LAGLK
Coding >Ophio5|7160
ATGGAGGCTTGGCTGAAGCAATCGGGGGCCTTCGGTGTGGATGGCATAGAGGTTGCTGATTTTCCCGTTACCGGA
CGCGGTGTCAAAGCACTGCGTAGCTTCAAAGAAGGAGATTGCATCCTAACCATCCCTTCTGCTTGCTTGTGGAAG
GTAGAAGGGGCGCGCGCCGATCCGCTCCTTGGGCCGGTTCTTCGCTCTGCGCGGCCGCCCTTGTCGGTCGAGGAC
ACTTTGGCCGTCTATCTCCTCTTTGTCAAGTCGCGAACATCAGGCTATGAGGGCCGTCGACATCATATCGCTGCG
ATACCGCAGAGCTACTCGGCAAGCATCTTCTTTACAGATGACGAGCTGCGAGTCTGCGAGGGATCCTCGCTCTTT
ACGCTCACCTCGCAGCTGGAACAGCGTGTGCAGGACGACTACAGGCGGCTGCATGTGCGGCTACTGAGCCAGCAT
CGCGATCTCTTCCCTCCAGACCATTTTACGATGGAAGATTACAAATGGGCTCTTTGCTCAGTATGGAGCCGTGCA
ATGGACTTTGCAGTCTCAGAGACGACTTCGGTTCGGCTCGTGGCCCCTCTGGCAGACATGCTAAACCATTCTCTC
GACGCAAAGCAGTGCCATGCTTACGATCCAAAGTCTGGAGACCTCTCCATCCTTGCCGCGAAGGACTACCAAGTC
GGAGATCAGATATTCATCTCCTACGGCAGTGTGCCGAACAACCGACTTTTGCGTCTTTACGGCTTTGTTCTGCCG
GACAACCCCAACGACAGTTACGACCTCGTGCTCCAGACGAGCCCAATGGCCCCCCTCTACGAGCAGAAGGAAAGG
CTCTGGGCACTGGCAGGGCTCGGCTCAACATGCACTATTTCCCTCACCCCGAAGGTCCCGCTTCCGAATAGCGTG
CTTCGATACCTCCGAATCCAGCGACTGGACGAATCCAACATCACAGACATGACTCTGCAGCTAGTGAATGGCACA
GACGGCAAGATCAGTGATGAAAACGAGATGCAGGTGCTGCAATTTTTGGTCGATTCGATAGACATCCTCCTAGAG
AGCTTCGTTATCCCGCTGGAAAAGCTCGAGGCAAAGCTCGCCGGGGAAGATTACCCCGCGGGGGGCAACGCTTGG
GCAGCGGCACAGGTCAGTGCGGGCGAGCAGCGCATCTTGACGCGGGCCAAGAAGTCGGCCGAAGATCTGCTGGAG
GCGATTTTTCGTCCACCGGCGACACAGTGCGCCAACTGCGGGAACAGGTCTGGTGCGTTGATGTCGTGCGGCAGA
TGCAAGGCCGTCAAGTACTGCAAGAGGGAGTGTCAGGTGGCGCACTTTAAAGACCACAGGGCCGCGTGCCGGACT
CTTGCGGGATTGAAA
Transcript >Ophio5|7160
ATGGAGGCTTGGCTGAAGCAATCGGGGGCCTTCGGTGTGGATGGCATAGAGGTTGCTGATTTTCCCGTTACCGGA
CGCGGTGTCAAAGCACTGCGTAGCTTCAAAGAAGGAGATTGCATCCTAACCATCCCTTCTGCTTGCTTGTGGAAG
GTAGAAGGGGCGCGCGCCGATCCGCTCCTTGGGCCGGTTCTTCGCTCTGCGCGGCCGCCCTTGTCGGTCGAGGAC
ACTTTGGCCGTCTATCTCCTCTTTGTCAAGTCGCGAACATCAGGCTATGAGGGCCGTCGACATCATATCGCTGCG
ATACCGCAGAGCTACTCGGCAAGCATCTTCTTTACAGATGACGAGCTGCGAGTCTGCGAGGGATCCTCGCTCTTT
ACGCTCACCTCGCAGCTGGAACAGCGTGTGCAGGACGACTACAGGCGGCTGCATGTGCGGCTACTGAGCCAGCAT
CGCGATCTCTTCCCTCCAGACCATTTTACGATGGAAGATTACAAATGGGCTCTTTGCTCAGTATGGAGCCGTGCA
ATGGACTTTGCAGTCTCAGAGACGACTTCGGTTCGGCTCGTGGCCCCTCTGGCAGACATGCTAAACCATTCTCTC
GACGCAAAGCAGTGCCATGCTTACGATCCAAAGTCTGGAGACCTCTCCATCCTTGCCGCGAAGGACTACCAAGTC
GGAGATCAGATATTCATCTCCTACGGCAGTGTGCCGAACAACCGACTTTTGCGTCTTTACGGCTTTGTTCTGCCG
GACAACCCCAACGACAGTTACGACCTCGTGCTCCAGACGAGCCCAATGGCCCCCCTCTACGAGCAGAAGGAAAGG
CTCTGGGCACTGGCAGGGCTCGGCTCAACATGCACTATTTCCCTCACCCCGAAGGTCCCGCTTCCGAATAGCGTG
CTTCGATACCTCCGAATCCAGCGACTGGACGAATCCAACATCACAGACATGACTCTGCAGCTAGTGAATGGCACA
GACGGCAAGATCAGTGATGAAAACGAGATGCAGGTGCTGCAATTTTTGGTCGATTCGATAGACATCCTCCTAGAG
AGCTTCGTTATCCCGCTGGAAAAGCTCGAGGCAAAGCTCGCCGGGGAAGATTACCCCGCGGGGGGCAACGCTTGG
GCAGCGGCACAGGTCAGTGCGGGCGAGCAGCGCATCTTGACGCGGGCCAAGAAGTCGGCCGAAGATCTGCTGGAG
GCGATTTTTCGTCCACCGGCGACACAGTGCGCCAACTGCGGGAACAGGTCTGGTGCGTTGATGTCGTGCGGCAGA
TGCAAGGCCGTCAAGTACTGCAAGAGGGAGTGTCAGGTGGCGCACTTTAAAGACCACAGGGCCGCGTGCCGGACT
CTTGCGGGATTGAAATGA
Gene >Ophio5|7160
ATGGAGGCTTGGCTGAAGCAATCGGGGGCCTTCGGTGTGGATGGCATAGAGGTTGCTGATTTTCCCGTTACCGGA
CGCGGTGTCAAAGCACTGCGTAGCTTCAAAGAAGGAGATTGCATCCTAACCATCCCTTCTGCTTGCTTGTGGAAG
GTAGAAGGGGCGCGCGCCGATCCGCTCCTTGGGCCGGTTCTTCGCTCTGCGCGGCCGCCCTTGTCGGTCGAGGAC
ACTTTGGCCGTCTATCTCCTCTTTGTCAAGTCGCGAACATCAGGCTATGAGGGCCGTCGACATCATATCGCTGCG
ATACCGCAGAGCTACTCGGCAAGCATCTTCTTTACAGATGACGAGCTGCGAGTCTGCGAGGGATCCTCGCTCTTT
ACGCTCACCTCGCAGCTGGAACAGCGTGTGCAGGACGACTACAGGCGGCTGCATGTGCGGCTACTGAGCCAGCAT
CGCGATCTCTTCCCTCCAGACCATTTTACGATGGAAGATGTAAGTTTCACTGCCTCCTGCCGCACACTAACTCGT
TCCCTGTCGCTTACGAGCTTACTCTTCCCGTTATTAGTACAAATGGGCTCTTTGCTCAGTATGGAGCCGTGCAAT
GGACTTTGCAGTCTCAGAGACGACTTCGGTTCGGCTCGTGGCCCCTCTGGCAGACATGCTAAACCATTCTCTCGA
CGCAAAGCAGTGCCATGCTTACGATCCAAAGTCTGGAGACCTCTCCATCCTTGCCGCGAAGGACTACCAAGTCGG
AGATCAGGTTTGCCCACCACTCTGCTCATCTCTGTCGATGCGCAATTTTTAAATGTTAAAATGACAGATATTCAT
CTCCTACGGCAGTGTGCCGAACAACCGACTTTTGCGTCTTTACGGCTTTGTTCTGCCGGACAACCCCAACGACAG
TTACGACCTCGTGCTCCAGACGAGCCCAATGGCCCCCCTCTACGAGCAGAAGGAAAGGCTCTGGGCACTGGCAGG
GCTCGGCTCAACATGCACTATTTCCCTCACCCCGAAGGTCCCGCTTCCGAATAGCGTGCTTCGATACCTCCGAAT
CCAGCGACTGGACGAATCCAACATCACAGACATGACTCTGCAGCTAGTGAATGGCACAGACGGCAAGATCAGTGA
TGAAAACGAGATGCAGGTGCTGCAATTTTTGGTCGATTCGATAGACATCCTCCTAGAGAGCTTCGTTATCCCGCT
GGAAAAGCTCGAGGCAAAGCTCGCCGGGGAAGATTACCCCGCGGGGGGCAACGCTTGGGCAGCGGCACAGGTCAG
TGCGGGCGAGCAGCGCATCTTGACGCGGGCCAAGAAGTCGGCCGAAGATCTGCTGGAGGCGATTTTTCGTCCACC
GGCGACACAGTGCGCCAACTGCGGGAACAGGTCTGGTGCGTTGATGTCGTGCGGCAGATGCAAGGCCGTCAAGTA
CTGCAAGAGGGAGTGTCAGGTGGCGCACTTTAAAGACCACAGGGCCGCGTGCCGGACTCTTGCGGGATTGAAATG
A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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