© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|7148 |
| Gene name | |
| Location | scaffold_67:32499..33681 |
| Strand | + |
| Gene length (bp) | 1182 |
| Transcript length (bp) | 1182 |
| Coding sequence length (bp) | 1179 |
| Protein length (aa) | 393 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1386 | 0.0822 | 0.8437 | 0.1785 | 0.0945 | 0.0162 | 0.2938 | 0.1574 | 0.3049 | 0.0031 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 27 | 0.997461 |
| Orthofinder run ID | 4 |
| Orthogroup | 7377 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-floridani | Ophcf2|04571 |
| Ophiocordyceps camponoti-rufipedis | Ophun1|409 |
| Ophiocordyceps kimflemingae | Ophio5|7148 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|7148 MQTPGAVVTLTCFGLAVLAARIPRSTAETEIYEENLGRVSQPAKHGAHQPRLLARGFDAVFEDGPKMAPIEATSH MDALVDDEPGKLTVRNKNTDLAFRGDPRQLRFDAASYDEEEDAMPPRMAKLQTMERVQSLPRPNRPMEDYQEQFQ SESNRGHGGKSSQSEHEEAKDSIWKMHITSPTQSHSVTQGVNTQILPQTEPTPNAKTNDEPLLSANITDVTIQSQ QTDATLQAQETDDQFPSPYQSETGPAADDIRGLLLRKLLSANPTPPMTKRPRSKPFSTHTLADLGLSYDQIESYC QGTQLCSVSSHGLKLVGEVNGETTVFSLPKSVVHVHAQNESPYILHLAPSWHLQFASWIKSLLNSLLGTLWGTEE KRIQNCPQCPAGTPQLAQ |
| Coding | >Ophio5|7148 ATGCAAACTCCAGGCGCCGTCGTGACACTTACTTGCTTCGGCCTTGCAGTGCTGGCAGCCAGAATCCCTCGATCA ACGGCAGAGACGGAGATATACGAGGAGAACTTGGGCCGGGTTTCGCAACCTGCCAAACATGGCGCACATCAACCT CGTCTTCTAGCCAGAGGCTTCGATGCTGTATTTGAAGACGGTCCGAAAATGGCGCCGATTGAGGCTACCTCGCAC ATGGATGCGTTGGTTGATGACGAGCCTGGGAAGTTGACGGTTCGAAACAAGAACACCGACTTGGCTTTTCGAGGC GATCCGAGACAGTTGCGGTTTGACGCTGCGTCGTACGACGAAGAGGAGGATGCAATGCCTCCAAGAATGGCCAAA CTTCAGACTATGGAGCGTGTTCAATCTCTCCCTCGGCCCAACAGACCGATGGAGGATTATCAAGAACAGTTTCAG TCCGAGTCTAATAGAGGCCACGGTGGAAAATCATCTCAGTCTGAGCACGAGGAGGCCAAAGACTCCATCTGGAAG ATGCACATCACAAGCCCGACTCAGTCTCACTCAGTCACTCAAGGGGTCAATACCCAAATTTTGCCTCAGACTGAG CCCACCCCGAACGCCAAGACAAACGACGAGCCTCTCCTGAGCGCCAACATTACGGACGTGACTATACAGTCACAA CAGACGGACGCGACTCTACAAGCACAAGAGACAGACGACCAGTTCCCATCACCCTACCAATCCGAGACGGGCCCC GCCGCAGACGATATCCGAGGACTCCTCCTTCGCAAACTCCTTTCTGCCAACCCCACGCCACCCATGACCAAGAGA CCTCGAAGCAAACCTTTCAGCACTCACACCCTAGCAGATCTAGGCCTCTCGTACGATCAGATAGAATCCTACTGC CAAGGGACGCAGCTCTGCTCCGTGAGCTCCCATGGCTTGAAACTCGTCGGCGAGGTCAACGGGGAGACTACCGTC TTCTCACTTCCCAAGTCCGTCGTCCACGTACATGCCCAGAATGAATCTCCGTATATCCTTCACCTGGCGCCCTCT TGGCACCTTCAATTTGCCTCGTGGATTAAATCCCTTCTGAACTCTTTGCTCGGCACTTTGTGGGGTACCGAGGAG AAGAGAATCCAGAATTGTCCTCAGTGCCCGGCTGGTACGCCTCAGCTAGCCCAG |
| Transcript | >Ophio5|7148 ATGCAAACTCCAGGCGCCGTCGTGACACTTACTTGCTTCGGCCTTGCAGTGCTGGCAGCCAGAATCCCTCGATCA ACGGCAGAGACGGAGATATACGAGGAGAACTTGGGCCGGGTTTCGCAACCTGCCAAACATGGCGCACATCAACCT CGTCTTCTAGCCAGAGGCTTCGATGCTGTATTTGAAGACGGTCCGAAAATGGCGCCGATTGAGGCTACCTCGCAC ATGGATGCGTTGGTTGATGACGAGCCTGGGAAGTTGACGGTTCGAAACAAGAACACCGACTTGGCTTTTCGAGGC GATCCGAGACAGTTGCGGTTTGACGCTGCGTCGTACGACGAAGAGGAGGATGCAATGCCTCCAAGAATGGCCAAA CTTCAGACTATGGAGCGTGTTCAATCTCTCCCTCGGCCCAACAGACCGATGGAGGATTATCAAGAACAGTTTCAG TCCGAGTCTAATAGAGGCCACGGTGGAAAATCATCTCAGTCTGAGCACGAGGAGGCCAAAGACTCCATCTGGAAG ATGCACATCACAAGCCCGACTCAGTCTCACTCAGTCACTCAAGGGGTCAATACCCAAATTTTGCCTCAGACTGAG CCCACCCCGAACGCCAAGACAAACGACGAGCCTCTCCTGAGCGCCAACATTACGGACGTGACTATACAGTCACAA CAGACGGACGCGACTCTACAAGCACAAGAGACAGACGACCAGTTCCCATCACCCTACCAATCCGAGACGGGCCCC GCCGCAGACGATATCCGAGGACTCCTCCTTCGCAAACTCCTTTCTGCCAACCCCACGCCACCCATGACCAAGAGA CCTCGAAGCAAACCTTTCAGCACTCACACCCTAGCAGATCTAGGCCTCTCGTACGATCAGATAGAATCCTACTGC CAAGGGACGCAGCTCTGCTCCGTGAGCTCCCATGGCTTGAAACTCGTCGGCGAGGTCAACGGGGAGACTACCGTC TTCTCACTTCCCAAGTCCGTCGTCCACGTACATGCCCAGAATGAATCTCCGTATATCCTTCACCTGGCGCCCTCT TGGCACCTTCAATTTGCCTCGTGGATTAAATCCCTTCTGAACTCTTTGCTCGGCACTTTGTGGGGTACCGAGGAG AAGAGAATCCAGAATTGTCCTCAGTGCCCGGCTGGTACGCCTCAGCTAGCCCAGTGA |
| Gene | >Ophio5|7148 ATGCAAACTCCAGGCGCCGTCGTGACACTTACTTGCTTCGGCCTTGCAGTGCTGGCAGCCAGAATCCCTCGATCA ACGGCAGAGACGGAGATATACGAGGAGAACTTGGGCCGGGTTTCGCAACCTGCCAAACATGGCGCACATCAACCT CGTCTTCTAGCCAGAGGCTTCGATGCTGTATTTGAAGACGGTCCGAAAATGGCGCCGATTGAGGCTACCTCGCAC ATGGATGCGTTGGTTGATGACGAGCCTGGGAAGTTGACGGTTCGAAACAAGAACACCGACTTGGCTTTTCGAGGC GATCCGAGACAGTTGCGGTTTGACGCTGCGTCGTACGACGAAGAGGAGGATGCAATGCCTCCAAGAATGGCCAAA CTTCAGACTATGGAGCGTGTTCAATCTCTCCCTCGGCCCAACAGACCGATGGAGGATTATCAAGAACAGTTTCAG TCCGAGTCTAATAGAGGCCACGGTGGAAAATCATCTCAGTCTGAGCACGAGGAGGCCAAAGACTCCATCTGGAAG ATGCACATCACAAGCCCGACTCAGTCTCACTCAGTCACTCAAGGGGTCAATACCCAAATTTTGCCTCAGACTGAG CCCACCCCGAACGCCAAGACAAACGACGAGCCTCTCCTGAGCGCCAACATTACGGACGTGACTATACAGTCACAA CAGACGGACGCGACTCTACAAGCACAAGAGACAGACGACCAGTTCCCATCACCCTACCAATCCGAGACGGGCCCC GCCGCAGACGATATCCGAGGACTCCTCCTTCGCAAACTCCTTTCTGCCAACCCCACGCCACCCATGACCAAGAGA CCTCGAAGCAAACCTTTCAGCACTCACACCCTAGCAGATCTAGGCCTCTCGTACGATCAGATAGAATCCTACTGC CAAGGGACGCAGCTCTGCTCCGTGAGCTCCCATGGCTTGAAACTCGTCGGCGAGGTCAACGGGGAGACTACCGTC TTCTCACTTCCCAAGTCCGTCGTCCACGTACATGCCCAGAATGAATCTCCGTATATCCTTCACCTGGCGCCCTCT TGGCACCTTCAATTTGCCTCGTGGATTAAATCCCTTCTGAACTCTTTGCTCGGCACTTTGTGGGGTACCGAGGAG AAGAGAATCCAGAATTGTCCTCAGTGCCCGGCTGGTACGCCTCAGCTAGCCCAGTGA |