Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7147
Gene name
Locationscaffold_67:30335..31211
Strand+
Gene length (bp)876
Transcript length (bp)876
Coding sequence length (bp)873
Protein length (aa) 291

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00657 Lipase_GDSL GDSL-like Lipase/Acylhydrolase 5.3E-23 28 287
PF13472 Lipase_GDSL_2 GDSL-like Lipase/Acylhydrolase family 2.9E-12 30 281

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q99289|HLT_VIBPA Thermolabile hemolysin OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=VPA0226 PE=1 SV=2 26 287 3.0E-19
sp|P10480|GCAT_AERHY Phosphatidylcholine-sterol acyltransferase OS=Aeromonas hydrophila PE=1 SV=3 9 285 2.0E-16
sp|Q6B6R8|ESTA_PSEPU Esterase EstA OS=Pseudomonas putida GN=estA PE=3 SV=1 5 285 6.0E-10
sp|O33407|ESTA_PSEAE Esterase EstA OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=estA PE=1 SV=1 5 285 6.0E-10
sp|Q9FD10|SSEJ_SALTY Secreted effector protein SseJ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=sseJ PE=1 SV=1 26 284 2.0E-09
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Swissprot ID Swissprot Description Start End E-value
sp|Q99289|HLT_VIBPA Thermolabile hemolysin OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=VPA0226 PE=1 SV=2 26 287 3.0E-19
sp|P10480|GCAT_AERHY Phosphatidylcholine-sterol acyltransferase OS=Aeromonas hydrophila PE=1 SV=3 9 285 2.0E-16
sp|Q6B6R8|ESTA_PSEPU Esterase EstA OS=Pseudomonas putida GN=estA PE=3 SV=1 5 285 6.0E-10
sp|O33407|ESTA_PSEAE Esterase EstA OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=estA PE=1 SV=1 5 285 6.0E-10
sp|Q9FD10|SSEJ_SALTY Secreted effector protein SseJ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=sseJ PE=1 SV=1 26 284 2.0E-09
sp|O80470|GDL38_ARATH GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana GN=At2g23540 PE=2 SV=1 4 287 1.0E-08
sp|Q9SJB4|GDL34_ARATH GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1 1 290 1.0E-08
sp|Q9SF94|GDL50_ARATH GDSL esterase/lipase At3g09930 OS=Arabidopsis thaliana GN=At3g09930 PE=2 SV=1 28 278 5.0E-08
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GO

GO Term Description Terminal node
GO:0016788 hydrolase activity, acting on ester bonds Yes
GO:0003824 catalytic activity No
GO:0016787 hydrolase activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7147
MAYILLPFCLLLATASAAPIVRSGYSALVVFGDSFSDNGNGYASTKHAWPADPAYYQGRFSNGPVWPEDLAATLS
TPLHDYAQGGATTDNAMVQGYTGRKGDIPVPSLTDQVNQFLAKPPVDLASSLVILFGGVNDVLLNSNITAARSAG
VIGRLVSKLRDAGALHFVLVNVPDLSLIPYDAYIDDGLQAVLRDYAEHLGGHLRRVAQRISSASVKVVDMIPLFR
SFNVYEKGWKAAGFDQFGLYGSCLVGAYSEAPRSLCSDPDRRVFWDVYHPSRKTHALMAEEIRKAL
Coding >Ophio5|7147
ATGGCATACATCCTCCTCCCTTTCTGCCTGCTACTGGCAACCGCGTCGGCCGCCCCAATCGTTAGGTCCGGATAC
TCGGCCCTCGTCGTCTTCGGAGACTCCTTCTCAGACAACGGCAACGGCTACGCAAGCACAAAACATGCCTGGCCC
GCCGATCCGGCCTACTATCAAGGCCGCTTCTCTAACGGCCCCGTCTGGCCCGAGGATTTGGCCGCGACACTCTCC
ACCCCCCTGCACGACTACGCTCAAGGCGGCGCCACCACTGACAACGCCATGGTTCAAGGCTATACTGGGCGAAAA
GGCGACATCCCCGTACCGTCGCTGACAGACCAGGTCAACCAATTCCTCGCGAAGCCGCCCGTCGACCTCGCCAGC
TCCCTGGTCATTCTTTTTGGCGGTGTCAATGACGTTCTCCTCAACTCCAACATCACCGCCGCCCGCTCGGCCGGA
GTTATCGGCCGGCTCGTCAGCAAGCTTCGAGACGCTGGTGCACTTCACTTCGTCTTGGTCAACGTTCCGGACCTC
AGCTTGATCCCGTACGACGCGTACATTGATGACGGGTTGCAAGCCGTTCTACGTGACTATGCCGAGCACCTTGGC
GGCCATCTCCGGAGAGTTGCACAACGTATCAGCTCGGCGAGCGTCAAGGTCGTCGACATGATCCCCCTCTTCCGC
AGCTTCAACGTCTACGAAAAGGGCTGGAAGGCTGCAGGCTTTGACCAATTCGGCCTTTACGGAAGCTGTCTAGTA
GGCGCCTATTCCGAGGCGCCGCGCTCGCTCTGTAGCGATCCCGATCGGCGCGTCTTCTGGGACGTGTATCATCCG
TCTCGGAAGACGCACGCTCTCATGGCCGAGGAGATTAGAAAGGCTCTG
Transcript >Ophio5|7147
ATGGCATACATCCTCCTCCCTTTCTGCCTGCTACTGGCAACCGCGTCGGCCGCCCCAATCGTTAGGTCCGGATAC
TCGGCCCTCGTCGTCTTCGGAGACTCCTTCTCAGACAACGGCAACGGCTACGCAAGCACAAAACATGCCTGGCCC
GCCGATCCGGCCTACTATCAAGGCCGCTTCTCTAACGGCCCCGTCTGGCCCGAGGATTTGGCCGCGACACTCTCC
ACCCCCCTGCACGACTACGCTCAAGGCGGCGCCACCACTGACAACGCCATGGTTCAAGGCTATACTGGGCGAAAA
GGCGACATCCCCGTACCGTCGCTGACAGACCAGGTCAACCAATTCCTCGCGAAGCCGCCCGTCGACCTCGCCAGC
TCCCTGGTCATTCTTTTTGGCGGTGTCAATGACGTTCTCCTCAACTCCAACATCACCGCCGCCCGCTCGGCCGGA
GTTATCGGCCGGCTCGTCAGCAAGCTTCGAGACGCTGGTGCACTTCACTTCGTCTTGGTCAACGTTCCGGACCTC
AGCTTGATCCCGTACGACGCGTACATTGATGACGGGTTGCAAGCCGTTCTACGTGACTATGCCGAGCACCTTGGC
GGCCATCTCCGGAGAGTTGCACAACGTATCAGCTCGGCGAGCGTCAAGGTCGTCGACATGATCCCCCTCTTCCGC
AGCTTCAACGTCTACGAAAAGGGCTGGAAGGCTGCAGGCTTTGACCAATTCGGCCTTTACGGAAGCTGTCTAGTA
GGCGCCTATTCCGAGGCGCCGCGCTCGCTCTGTAGCGATCCCGATCGGCGCGTCTTCTGGGACGTGTATCATCCG
TCTCGGAAGACGCACGCTCTCATGGCCGAGGAGATTAGAAAGGCTCTGTAG
Gene >Ophio5|7147
ATGGCATACATCCTCCTCCCTTTCTGCCTGCTACTGGCAACCGCGTCGGCCGCCCCAATCGTTAGGTCCGGATAC
TCGGCCCTCGTCGTCTTCGGAGACTCCTTCTCAGACAACGGCAACGGCTACGCAAGCACAAAACATGCCTGGCCC
GCCGATCCGGCCTACTATCAAGGCCGCTTCTCTAACGGCCCCGTCTGGCCCGAGGATTTGGCCGCGACACTCTCC
ACCCCCCTGCACGACTACGCTCAAGGCGGCGCCACCACTGACAACGCCATGGTTCAAGGCTATACTGGGCGAAAA
GGCGACATCCCCGTACCGTCGCTGACAGACCAGGTCAACCAATTCCTCGCGAAGCCGCCCGTCGACCTCGCCAGC
TCCCTGGTCATTCTTTTTGGCGGTGTCAATGACGTTCTCCTCAACTCCAACATCACCGCCGCCCGCTCGGCCGGA
GTTATCGGCCGGCTCGTCAGCAAGCTTCGAGACGCTGGTGCACTTCACTTCGTCTTGGTCAACGTTCCGGACCTC
AGCTTGATCCCGTACGACGCGTACATTGATGACGGGTTGCAAGCCGTTCTACGTGACTATGCCGAGCACCTTGGC
GGCCATCTCCGGAGAGTTGCACAACGTATCAGCTCGGCGAGCGTCAAGGTCGTCGACATGATCCCCCTCTTCCGC
AGCTTCAACGTCTACGAAAAGGGCTGGAAGGCTGCAGGCTTTGACCAATTCGGCCTTTACGGAAGCTGTCTAGTA
GGCGCCTATTCCGAGGCGCCGCGCTCGCTCTGTAGCGATCCCGATCGGCGCGTCTTCTGGGACGTGTATCATCCG
TCTCGGAAGACGCACGCTCTCATGGCCGAGGAGATTAGAAAGGCTCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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