© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|7141 |
| Gene name | |
| Location | scaffold_67:14085..14856 |
| Strand | + |
| Gene length (bp) | 771 |
| Transcript length (bp) | 771 |
| Coding sequence length (bp) | 768 |
| Protein length (aa) | 256 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00069 | Pkinase | Protein kinase domain | 1.8E-11 | 104 | 220 |
| PF01636 | APH | Phosphotransferase enzyme family | 1.6E-05 | 172 | 204 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P53670|LIMK2_RAT | LIM domain kinase 2 OS=Rattus norvegicus GN=Limk2 PE=2 SV=1 | 83 | 201 | 2.0E-07 |
| sp|O54785|LIMK2_MOUSE | LIM domain kinase 2 OS=Mus musculus GN=Limk2 PE=1 SV=2 | 83 | 201 | 2.0E-07 |
| sp|Q32L23|LIMK2_BOVIN | LIM domain kinase 2 OS=Bos taurus GN=LIMK2 PE=2 SV=1 | 83 | 201 | 2.0E-07 |
| sp|P53671|LIMK2_HUMAN | LIM domain kinase 2 OS=Homo sapiens GN=LIMK2 PE=1 SV=1 | 83 | 201 | 3.0E-07 |
| sp|P53666|LIMK2_CHICK | LIM domain kinase 2 OS=Gallus gallus GN=LIMK2 PE=2 SV=1 | 83 | 201 | 6.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P53670|LIMK2_RAT | LIM domain kinase 2 OS=Rattus norvegicus GN=Limk2 PE=2 SV=1 | 83 | 201 | 2.0E-07 |
| sp|O54785|LIMK2_MOUSE | LIM domain kinase 2 OS=Mus musculus GN=Limk2 PE=1 SV=2 | 83 | 201 | 2.0E-07 |
| sp|Q32L23|LIMK2_BOVIN | LIM domain kinase 2 OS=Bos taurus GN=LIMK2 PE=2 SV=1 | 83 | 201 | 2.0E-07 |
| sp|P53671|LIMK2_HUMAN | LIM domain kinase 2 OS=Homo sapiens GN=LIMK2 PE=1 SV=1 | 83 | 201 | 3.0E-07 |
| sp|P53666|LIMK2_CHICK | LIM domain kinase 2 OS=Gallus gallus GN=LIMK2 PE=2 SV=1 | 83 | 201 | 6.0E-07 |
| sp|Q15569|TESK1_HUMAN | Dual specificity testis-specific protein kinase 1 OS=Homo sapiens GN=TESK1 PE=1 SV=2 | 106 | 201 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005524 | ATP binding | Yes |
| GO:0004672 | protein kinase activity | Yes |
| GO:0006468 | protein phosphorylation | Yes |
| GO:0043412 | macromolecule modification | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0043167 | ion binding | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0016310 | phosphorylation | No |
| GO:0044238 | primary metabolic process | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0043168 | anion binding | No |
| GO:0008150 | biological_process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0000166 | nucleotide binding | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups | No |
| GO:0036094 | small molecule binding | No |
| GO:0016301 | kinase activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0036211 | protein modification process | No |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor | No |
| GO:0019538 | protein metabolic process | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0009987 | cellular process | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 66 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|7141 MDVYVKNDVFVAKDDDYVFDHTKIILRGPNDEYFYAIIYKRIPSSSKIDVSELDTTRIPTDHLWPLAIPQFTRAP DPLPSTSFLKQPRLVDHEKSSGNLVFASLILAEVEACEVLRTHPHPNIVQYLGCVVKDGRITGLGFAKHSLTLEQ LLEDGKPFDTARCLLGIEAGVRHMHNLGLIHNDLNPSNIMMDGHHPVIIDFDSCKREGDKLGVKAGTYGWSLLDQ DYSRRENDLYSLSKIREALSEAAKKCSIPQT |
| Coding | >Ophio5|7141 ATGGATGTTTACGTCAAAAACGACGTGTTCGTCGCAAAAGACGACGATTACGTTTTTGATCACACAAAGATCATT CTACGAGGACCCAACGACGAATACTTTTACGCCATAATCTACAAGCGCATACCATCATCCTCGAAGATCGACGTG AGTGAGCTAGATACGACCAGAATACCAACGGATCATCTCTGGCCATTAGCTATTCCCCAGTTCACTCGAGCTCCC GACCCTCTACCTTCCACCTCCTTTCTTAAACAACCTAGACTCGTGGATCATGAAAAATCTTCGGGAAATCTCGTC TTCGCCAGTTTAATCCTGGCTGAGGTGGAAGCGTGCGAAGTCCTAAGAACGCACCCACATCCCAATATTGTTCAA TACCTGGGTTGCGTTGTCAAGGACGGCAGGATAACAGGACTTGGCTTTGCCAAGCACTCTTTGACTCTTGAGCAG TTATTAGAAGACGGAAAACCCTTCGATACGGCTCGTTGTCTGCTTGGGATTGAAGCAGGTGTTCGCCATATGCAT AATTTGGGGCTTATACATAATGACCTCAACCCGTCCAACATTATGATGGATGGACATCATCCTGTAATTATTGAC TTTGATTCATGCAAGCGGGAAGGAGATAAACTGGGTGTCAAGGCGGGCACTTATGGATGGTCATTGCTTGATCAG GACTACTCAAGGCGGGAGAACGATCTCTATAGCCTCTCAAAGATTCGAGAGGCACTGAGCGAAGCCGCTAAAAAG TGTTCAATTCCTCAGACC |
| Transcript | >Ophio5|7141 ATGGATGTTTACGTCAAAAACGACGTGTTCGTCGCAAAAGACGACGATTACGTTTTTGATCACACAAAGATCATT CTACGAGGACCCAACGACGAATACTTTTACGCCATAATCTACAAGCGCATACCATCATCCTCGAAGATCGACGTG AGTGAGCTAGATACGACCAGAATACCAACGGATCATCTCTGGCCATTAGCTATTCCCCAGTTCACTCGAGCTCCC GACCCTCTACCTTCCACCTCCTTTCTTAAACAACCTAGACTCGTGGATCATGAAAAATCTTCGGGAAATCTCGTC TTCGCCAGTTTAATCCTGGCTGAGGTGGAAGCGTGCGAAGTCCTAAGAACGCACCCACATCCCAATATTGTTCAA TACCTGGGTTGCGTTGTCAAGGACGGCAGGATAACAGGACTTGGCTTTGCCAAGCACTCTTTGACTCTTGAGCAG TTATTAGAAGACGGAAAACCCTTCGATACGGCTCGTTGTCTGCTTGGGATTGAAGCAGGTGTTCGCCATATGCAT AATTTGGGGCTTATACATAATGACCTCAACCCGTCCAACATTATGATGGATGGACATCATCCTGTAATTATTGAC TTTGATTCATGCAAGCGGGAAGGAGATAAACTGGGTGTCAAGGCGGGCACTTATGGATGGTCATTGCTTGATCAG GACTACTCAAGGCGGGAGAACGATCTCTATAGCCTCTCAAAGATTCGAGAGGCACTGAGCGAAGCCGCTAAAAAG TGTTCAATTCCTCAGACCTGA |
| Gene | >Ophio5|7141 ATGGATGTTTACGTCAAAAACGACGTGTTCGTCGCAAAAGACGACGATTACGTTTTTGATCACACAAAGATCATT CTACGAGGACCCAACGACGAATACTTTTACGCCATAATCTACAAGCGCATACCATCATCCTCGAAGATCGACGTG AGTGAGCTAGATACGACCAGAATACCAACGGATCATCTCTGGCCATTAGCTATTCCCCAGTTCACTCGAGCTCCC GACCCTCTACCTTCCACCTCCTTTCTTAAACAACCTAGACTCGTGGATCATGAAAAATCTTCGGGAAATCTCGTC TTCGCCAGTTTAATCCTGGCTGAGGTGGAAGCGTGCGAAGTCCTAAGAACGCACCCACATCCCAATATTGTTCAA TACCTGGGTTGCGTTGTCAAGGACGGCAGGATAACAGGACTTGGCTTTGCCAAGCACTCTTTGACTCTTGAGCAG TTATTAGAAGACGGAAAACCCTTCGATACGGCTCGTTGTCTGCTTGGGATTGAAGCAGGTGTTCGCCATATGCAT AATTTGGGGCTTATACATAATGACCTCAACCCGTCCAACATTATGATGGATGGACATCATCCTGTAATTATTGAC TTTGATTCATGCAAGCGGGAAGGAGATAAACTGGGTGTCAAGGCGGGCACTTATGGATGGTCATTGCTTGATCAG GACTACTCAAGGCGGGAGAACGATCTCTATAGCCTCTCAAAGATTCGAGAGGCACTGAGCGAAGCCGCTAAAAAG TGTTCAATTCCTCAGACCTGA |