Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7140
Gene name
Locationscaffold_67:12382..13311
Strand+
Gene length (bp)929
Transcript length (bp)879
Coding sequence length (bp)876
Protein length (aa) 292

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20237 DUF6594 Family of unknown function (DUF6594) 1.1E-25 23 277

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 210 232 22
2 239 261 22
3 266 288 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7140
MEPLNRSLSDQFPNHWQASTADSNLTLHGFRRFKTSHLLNLRYLEAEIAEIDHLIYQIGLGLDIEPSKVDRLGLK
QCQKDEKAPRPEKAVSKKLIQRLRRLMKEYDEAIIAFSTIMSMDTFSLIEDEQQSTLADRPLYEMYKTRLIRIDQ
RPRTRQDPLQRYIHRIMRFFRYIRVLKASHQNSVESASQNVHSRKRDGWSSQNTALIADATSRVIVALTTAVFLT
IPLVVLSHEPRPSIQMIIIAVCVVAFACFVSFALRASNLEMMVVAAGYAAIIAVFISNGSGGSKQTT
Coding >Ophio5|7140
ATGGAGCCCTTGAATCGAAGCCTGAGTGACCAGTTTCCGAACCATTGGCAGGCCAGCACGGCCGACAGCAACCTC
ACTCTCCATGGATTTCGGCGCTTCAAGACGTCCCACCTGCTTAATCTGCGCTACCTGGAAGCTGAAATAGCCGAG
ATAGATCATTTGATATACCAGATCGGCCTCGGTCTCGACATAGAGCCGTCCAAGGTAGATCGGCTGGGGCTGAAG
CAGTGTCAAAAAGACGAGAAAGCCCCACGCCCGGAGAAAGCAGTTTCGAAGAAGCTCATACAGAGACTTCGTCGA
TTGATGAAGGAATATGACGAGGCCATCATCGCTTTCAGCACCATCATGTCAATGGACACTTTTTCGCTCATAGAG
GATGAACAGCAATCCACATTAGCAGACCGTCCGCTATACGAAATGTACAAGACTAGACTTATTAGGATCGACCAA
AGGCCTCGAACGCGACAAGATCCGCTACAGCGCTACATCCATCGCATCATGAGATTCTTTCGCTACATCAGAGTA
TTGAAAGCCTCTCATCAGAATAGCGTCGAGAGCGCTTCCCAGAATGTCCATAGCAGAAAAAGAGATGGCTGGTCG
TCGCAGAATACTGCTTTGATTGCAGACGCGACCTCGAGGGTCATTGTCGCCTTGACCACAGCCGTCTTCCTTACC
ATTCCGCTCGTCGTCTTGTCCCACGAGCCACGGCCGAGCATTCAGATGATTATCATCGCAGTCTGCGTCGTGGCG
TTTGCTTGCTTTGTCTCGTTCGCTCTGCGAGCCTCGAATCTGGAGATGATGGTCGTAGCGGCTGGCTACGCTGCC
ATCATCGCCGTTTTCATTTCCAACGGTTCGGGGGGGTCTAAACAGACTACT
Transcript >Ophio5|7140
ATGGAGCCCTTGAATCGAAGCCTGAGTGACCAGTTTCCGAACCATTGGCAGGCCAGCACGGCCGACAGCAACCTC
ACTCTCCATGGATTTCGGCGCTTCAAGACGTCCCACCTGCTTAATCTGCGCTACCTGGAAGCTGAAATAGCCGAG
ATAGATCATTTGATATACCAGATCGGCCTCGGTCTCGACATAGAGCCGTCCAAGGTAGATCGGCTGGGGCTGAAG
CAGTGTCAAAAAGACGAGAAAGCCCCACGCCCGGAGAAAGCAGTTTCGAAGAAGCTCATACAGAGACTTCGTCGA
TTGATGAAGGAATATGACGAGGCCATCATCGCTTTCAGCACCATCATGTCAATGGACACTTTTTCGCTCATAGAG
GATGAACAGCAATCCACATTAGCAGACCGTCCGCTATACGAAATGTACAAGACTAGACTTATTAGGATCGACCAA
AGGCCTCGAACGCGACAAGATCCGCTACAGCGCTACATCCATCGCATCATGAGATTCTTTCGCTACATCAGAGTA
TTGAAAGCCTCTCATCAGAATAGCGTCGAGAGCGCTTCCCAGAATGTCCATAGCAGAAAAAGAGATGGCTGGTCG
TCGCAGAATACTGCTTTGATTGCAGACGCGACCTCGAGGGTCATTGTCGCCTTGACCACAGCCGTCTTCCTTACC
ATTCCGCTCGTCGTCTTGTCCCACGAGCCACGGCCGAGCATTCAGATGATTATCATCGCAGTCTGCGTCGTGGCG
TTTGCTTGCTTTGTCTCGTTCGCTCTGCGAGCCTCGAATCTGGAGATGATGGTCGTAGCGGCTGGCTACGCTGCC
ATCATCGCCGTTTTCATTTCCAACGGTTCGGGGGGGTCTAAACAGACTACTTGA
Gene >Ophio5|7140
ATGGAGCCCTTGAATCGAAGCCTGAGTGACCAGTTTCCGAACCATTGGCAGGCCAGCACGGCCGACAGCAACCTC
ACTCTCCATGGATTTCGGCGCTTCAAGACGTCCCACCTGCTTAATCTGCGCTACCTGGAAGCTGAAATAGCCGAG
ATAGATCATTTGATATACCAGATCGGCCTCGGTCTCGACATAGAGCCGTCCAAGGTAGATCGGCTGGGGCTGAAG
CAGTGTCAAAAAGACGAGAAAGCCCCACGCCCGGAGAAAGCAGTTTCGAAGAAGCTCATACAGAGACTTCGTCGA
TTGATGAAGGAATATGGTCCGTCCAGGCCAATAGCGTACACATGGACAATGCTAAGCTCGCGGCAGACGAGGCCA
TCATCGCTTTCAGCACCATCATGTCAATGGACACTTTTTCGCTCATAGAGGATGAACAGCAATCCACATTAGCAG
ACCGTCCGCTATACGAAATGTACAAGACTAGACTTATTAGGATCGACCAAAGGCCTCGAACGCGACAAGATCCGC
TACAGCGCTACATCCATCGCATCATGAGATTCTTTCGCTACATCAGAGTATTGAAAGCCTCTCATCAGAATAGCG
TCGAGAGCGCTTCCCAGAATGTCCATAGCAGAAAAAGAGATGGCTGGTCGTCGCAGAATACTGCTTTGATTGCAG
ACGCGACCTCGAGGGTCATTGTCGCCTTGACCACAGCCGTCTTCCTTACCATTCCGCTCGTCGTCTTGTCCCACG
AGCCACGGCCGAGCATTCAGATGATTATCATCGCAGTCTGCGTCGTGGCGTTTGCTTGCTTTGTCTCGTTCGCTC
TGCGAGCCTCGAATCTGGAGATGATGGTCGTAGCGGCTGGCTACGCTGCCATCATCGCCGTTTTCATTTCCAACG
GTTCGGGGGGGTCTAAACAGACTACTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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