© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|7098 |
| Gene name | |
| Location | scaffold_66:47947..49770 |
| Strand | - |
| Gene length (bp) | 1823 |
| Transcript length (bp) | 1650 |
| Coding sequence length (bp) | 1647 |
| Protein length (aa) | 549 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00999 | Na_H_Exchanger | Sodium/hydrogen exchanger family | 1.1E-44 | 23 | 460 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q99271|NAH1_YEAST | Na(+)/H(+) antiporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NHA1 PE=1 SV=1 | 7 | 465 | 6.0E-83 |
| sp|O42701|NAH2_ZYGRO | Na(+)/H(+) antiporter 2 OS=Zygosaccharomyces rouxii GN=SOD22 PE=3 SV=1 | 12 | 468 | 9.0E-79 |
| sp|Q99173|NAH1_ZYGRO | Na(+)/H(+) antiporter 1 OS=Zygosaccharomyces rouxii GN=SOD2 PE=3 SV=1 | 12 | 465 | 1.0E-78 |
| sp|O14123|NAH2_SCHPO | Probable Na(+)/H(+) antiporter C3A11.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sod22 PE=1 SV=1 | 15 | 465 | 2.0E-78 |
| sp|P36606|NAH_SCHPO | Na(+)/H(+) antiporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sod2 PE=1 SV=1 | 18 | 467 | 2.0E-60 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006812 | cation transport | Yes |
| GO:0015299 | solute:proton antiporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0008150 | biological_process | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0015297 | antiporter activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0006810 | transport | No |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0009987 | cellular process | No |
| GO:0015298 | solute:cation antiporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0015291 | secondary active transmembrane transporter activity | No |
| GO:0006811 | ion transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 37 | 22 |
| 2 | 123 | 145 | 22 |
| 3 | 150 | 172 | 22 |
| 4 | 198 | 220 | 22 |
| 5 | 235 | 257 | 22 |
| 6 | 277 | 296 | 19 |
| 7 | 350 | 372 | 22 |
| 8 | 393 | 415 | 22 |
| 9 | 442 | 464 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| SC16a | Pure fungal culture | 53.31 | 29.20 | 77.42 |
| CcL | In ants, during behavior modification | 1246.34 | 49.29 | 2443.40 |
| CcD | In ants, recently dead | 76.46 | 37.46 | 115.47 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| SC16a | CcL | 0.000286 | yes |
| SC16a | CcD | 0.128079 | no |
| CcL | CcD | 0.000286 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|7098 MGHGTTIWDVPLRPSNFNVSLALLGGFVSLFGLVSFLVKENFYLSEALISLLVGVAFGPKGTNWLRPREYAECLW EGVDAAECRSNLDGVTMAFSRLVLGVQLVLAGVQLPSRYLWTERRSLLLLVGPGMAAMWLATSGLVWIVLRPRSL LHALAVGACVTPTDPVLSAVIVKGKFADQNIPPELQDLVIAESGTNDGLGYPFLFFALYLIKFIGAGAGVGGEEA GGVADAVGLWFGFTWAYTIALGIAYGALVGLLGKSLLHWAEGRNYVDRESFLVFAISLALFVVGTCGLLGTDDVL ACFIAGNTFTWDDWFRLRTKDDSLQPTVDMLLNVTVFLWYGASLPWDSFVHNGVPGLTIGRLVALGVLVLVLRRL PWVFAMRRWIHQIEGVRHAVFVGFFGPIGVSAVFYIFVAVDFIDDYLSDADGVPRSDVVHLAETIRIVVWFLVVC SVVVHGLTIPIGKLGYLAPRFGRALGGRSPSREPLLITRQRRVSSLRKWLGRKTGSVDSGIIPREPNDFEDWDTG SGLSSPCRPSSAVSSGHGEGVARA |
| Coding | >Ophio5|7098 ATGGGCCACGGCACCACCATTTGGGACGTGCCGCTACGGCCGTCCAACTTCAACGTCAGCCTGGCCCTGCTCGGC GGCTTCGTCTCGCTCTTTGGTCTCGTTTCCTTTCTCGTCAAGGAGAATTTTTATCTCTCGGAAGCGCTCATCTCC CTTCTCGTCGGCGTCGCCTTCGGCCCCAAAGGCACAAACTGGCTCCGGCCTCGCGAGTACGCCGAATGTCTCTGG GAGGGCGTAGACGCAGCCGAGTGTCGATCCAACCTGGACGGCGTCACCATGGCCTTTTCGCGCCTCGTTCTGGGC GTCCAACTTGTCCTGGCCGGCGTACAGCTTCCCAGTCGATATCTCTGGACCGAGCGTCGCTCTTTGCTACTCCTC GTCGGTCCCGGTATGGCGGCCATGTGGTTGGCCACGAGCGGCCTCGTCTGGATTGTGCTTCGTCCTCGGAGCCTT CTTCATGCTTTGGCTGTGGGGGCCTGTGTGACGCCGACGGATCCGGTGCTTTCGGCCGTCATCGTCAAGGGCAAG TTTGCCGATCAGAATATCCCGCCCGAGTTGCAGGATTTGGTCATTGCCGAGTCGGGGACGAATGACGGCTTGGGC TATCCCTTTCTGTTCTTTGCTCTCTATCTCATCAAGTTTATCGGCGCCGGTGCCGGTGTCGGAGGAGAAGAAGCG GGAGGCGTGGCCGATGCCGTCGGTCTCTGGTTCGGCTTCACCTGGGCCTATACCATCGCCCTCGGCATCGCCTAC GGCGCCTTGGTCGGCCTGCTCGGCAAGTCGCTTCTTCACTGGGCCGAAGGGCGCAACTACGTCGATCGCGAGAGC TTCCTCGTCTTCGCCATCTCGCTTGCCCTCTTTGTCGTCGGCACCTGCGGTCTACTGGGTACCGACGATGTCCTA GCCTGCTTCATCGCCGGAAACACCTTCACCTGGGACGACTGGTTCCGGCTACGGACCAAGGATGACTCGCTGCAG CCGACGGTCGACATGCTGCTCAACGTCACCGTCTTCTTGTGGTACGGTGCCTCGCTGCCGTGGGACAGCTTCGTG CACAACGGCGTGCCGGGCCTCACCATCGGTCGTCTCGTCGCCTTGGGAGTTCTCGTGCTGGTGCTGAGACGGCTG CCGTGGGTGTTTGCCATGCGCAGATGGATTCATCAGATCGAGGGGGTGCGTCATGCCGTCTTTGTCGGCTTCTTT GGGCCCATTGGCGTTTCTGCCGTCTTCTACATCTTCGTCGCCGTCGACTTCATCGACGATTACTTGAGTGACGCC GACGGCGTACCGAGGAGCGACGTCGTTCATCTGGCCGAGACGATACGCATCGTCGTCTGGTTCCTCGTCGTCTGC AGCGTCGTCGTCCACGGACTGACCATCCCCATCGGCAAGCTCGGATACCTGGCGCCGCGCTTCGGGCGAGCCTTG GGCGGCCGGAGCCCTAGCCGTGAGCCTCTACTCATCACGCGTCAGAGGAGGGTCTCGAGCCTCAGGAAGTGGCTC GGCCGCAAGACGGGCAGTGTCGATTCCGGCATCATCCCCCGCGAGCCCAACGATTTCGAAGACTGGGATACCGGC TCGGGCTTGAGCTCGCCGTGTCGGCCGTCCAGCGCCGTCTCGTCGGGCCATGGCGAGGGTGTCGCTCGTGCT |
| Transcript | >Ophio5|7098 ATGGGCCACGGCACCACCATTTGGGACGTGCCGCTACGGCCGTCCAACTTCAACGTCAGCCTGGCCCTGCTCGGC GGCTTCGTCTCGCTCTTTGGTCTCGTTTCCTTTCTCGTCAAGGAGAATTTTTATCTCTCGGAAGCGCTCATCTCC CTTCTCGTCGGCGTCGCCTTCGGCCCCAAAGGCACAAACTGGCTCCGGCCTCGCGAGTACGCCGAATGTCTCTGG GAGGGCGTAGACGCAGCCGAGTGTCGATCCAACCTGGACGGCGTCACCATGGCCTTTTCGCGCCTCGTTCTGGGC GTCCAACTTGTCCTGGCCGGCGTACAGCTTCCCAGTCGATATCTCTGGACCGAGCGTCGCTCTTTGCTACTCCTC GTCGGTCCCGGTATGGCGGCCATGTGGTTGGCCACGAGCGGCCTCGTCTGGATTGTGCTTCGTCCTCGGAGCCTT CTTCATGCTTTGGCTGTGGGGGCCTGTGTGACGCCGACGGATCCGGTGCTTTCGGCCGTCATCGTCAAGGGCAAG TTTGCCGATCAGAATATCCCGCCCGAGTTGCAGGATTTGGTCATTGCCGAGTCGGGGACGAATGACGGCTTGGGC TATCCCTTTCTGTTCTTTGCTCTCTATCTCATCAAGTTTATCGGCGCCGGTGCCGGTGTCGGAGGAGAAGAAGCG GGAGGCGTGGCCGATGCCGTCGGTCTCTGGTTCGGCTTCACCTGGGCCTATACCATCGCCCTCGGCATCGCCTAC GGCGCCTTGGTCGGCCTGCTCGGCAAGTCGCTTCTTCACTGGGCCGAAGGGCGCAACTACGTCGATCGCGAGAGC TTCCTCGTCTTCGCCATCTCGCTTGCCCTCTTTGTCGTCGGCACCTGCGGTCTACTGGGTACCGACGATGTCCTA GCCTGCTTCATCGCCGGAAACACCTTCACCTGGGACGACTGGTTCCGGCTACGGACCAAGGATGACTCGCTGCAG CCGACGGTCGACATGCTGCTCAACGTCACCGTCTTCTTGTGGTACGGTGCCTCGCTGCCGTGGGACAGCTTCGTG CACAACGGCGTGCCGGGCCTCACCATCGGTCGTCTCGTCGCCTTGGGAGTTCTCGTGCTGGTGCTGAGACGGCTG CCGTGGGTGTTTGCCATGCGCAGATGGATTCATCAGATCGAGGGGGTGCGTCATGCCGTCTTTGTCGGCTTCTTT GGGCCCATTGGCGTTTCTGCCGTCTTCTACATCTTCGTCGCCGTCGACTTCATCGACGATTACTTGAGTGACGCC GACGGCGTACCGAGGAGCGACGTCGTTCATCTGGCCGAGACGATACGCATCGTCGTCTGGTTCCTCGTCGTCTGC AGCGTCGTCGTCCACGGACTGACCATCCCCATCGGCAAGCTCGGATACCTGGCGCCGCGCTTCGGGCGAGCCTTG GGCGGCCGGAGCCCTAGCCGTGAGCCTCTACTCATCACGCGTCAGAGGAGGGTCTCGAGCCTCAGGAAGTGGCTC GGCCGCAAGACGGGCAGTGTCGATTCCGGCATCATCCCCCGCGAGCCCAACGATTTCGAAGACTGGGATACCGGC TCGGGCTTGAGCTCGCCGTGTCGGCCGTCCAGCGCCGTCTCGTCGGGCCATGGCGAGGGTGTCGCTCGTGCTTGA |
| Gene | >Ophio5|7098 ATGGGCCACGGCACCACCATTTGGGACGTGCCGCTACGGCCGTCCAACTTCAACGTCAGCCTGGCCCTGCTCGGC GGCTTCGTCTCGCTCTTTGGTCTCGTTTCCTTTCTCGTCAAGGAGAATTTTTATCTCTCGGAAGCGCGTGAGTAA ACATTTTTTGACCCTTTTTTTGGGGGGGTTTTTTTTTCCCATATACTCACCCTTTTATTCCCGGGGGAGGGGGAG AAAAAAAAGTCATCTCCCTTCTCGTCGGCGTCGCCTTCGGCCCCAAAGGCACAAACTGGCTCCGGCCTCGCGAGT ACGCCGAATGTCTCTGGGAGGGCGTAGACGCAGCCGAGTGTCGATCCAACCTGGACGGCGTCACCATGGCCTTTT CGCGCCTCGTTCTGGGCGTCCAACTTGTCCTGGCCGGCGTACAGCTTCCCAGTCGATATCTCTGGACCGAGCGTC GCTCTTTGCTACTCCTCGTCGGTCCCGGTATGGCGGCCATGTGGTTGGCCACGAGCGGCCTCGTCTGGATTGTGC TTCGTCCTCGGAGCCTTCTTCATGCTTTGGCTGTGGGGGCCTGTGTGACGCCGACGGATCCGGTGCTTTCGGCCG TCATCGTCAAGGGCAAGTTTGCCGATCAGAATATCCCGCCCGAGTTGCAGGATTTGGTCATTGCCGAGTCGGGGA CGAATGACGGCTTGGGCTATCCCTTTCTGTTCTTTGCTCTCTATCTCATCAAGTTTATCGGCGCCGGTGCCGGTG TCGGAGGAGAAGAAGCGGGAGGCGTGGCCGATGCCGTCGGTCTCTGGTTCGGCTTCACCTGGGCCTATACCATCG CCCTCGGCATCGCCTACGGCGCCTTGGTCGGCCTGCTCGGCAAGTCGCTTCTTCACTGGGCCGAAGGGCGCAACT ACGTCGATCGCGAGAGCTTCCTCGTCTTCGCCATCTCGCTTGCCCTCTTTGTCGTCGGCACCTGCGGTCTACTGG GTACCGACGATGTCCTAGCCTGCTTCATCGCCGGAAACACCTTCACCTGGGACGACTGGTTCCGGCTACGGACCA AGGATGACTCGCTGCAGCCGACGGTCGACATGCTGCTCAACGTCACCGTCTTCTTGTGGTACGGTGCCTCGCTGC CGTGGGACAGCTTCGTGCACAACGGCGTGCCGGGCCTCACCATCGGTCGTCTCGTCGCCTTGGGAGTTCTCGTGC TGGTGCTGAGACGGCTGCCGTGGGTGTTTGCCATGCGCAGATGGATTCATCAGATCGAGGGGGTGCGTCATGCCG TCTTTGTCGGCTTCTTTGGGCCCATTGGCGTTTCTGCCGTCTTCTACATCTTCGTCGCCGTCGACTTCATCGACG ATTACTTGAGTGACGCCGACGGCGTACCGAGGAGCGACGTCGTTCATCTGGCCGAGACGATACGCATCGTCGTCT GGTTCCTCGTCGTCTGCAGCGTCGTGAGTTTGGTCCTATAGCAAAAATTCATTCATTCCCTGAGGCGCTCGCTAA TCACACCCCCCCTTTTTTTTTTGGTTCAGGTCGTCCACGGACTGACCATCCCCATCGGCAAGCTCGGATACCTGG CGCCGCGCTTCGGGCGAGCCTTGGGCGGCCGGAGCCCTAGCCGTGAGCCTCTACTCATCACGCGTCAGAGGAGGG TCTCGAGCCTCAGGAAGTGGCTCGGCCGCAAGACGGGCAGTGTCGATTCCGGCATCATCCCCCGCGAGCCCAACG ATTTCGAAGACTGGGATACCGGCTCGGGCTTGAGCTCGCCGTGTCGGCCGTCCAGCGCCGTCTCGTCGGGCCATG GCGAGGGTGTCGCTCGTGCTTGA |