Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7087
Gene name
Locationscaffold_66:11009..13491
Strand-
Gene length (bp)2482
Transcript length (bp)2322
Coding sequence length (bp)2319
Protein length (aa) 773

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09359 VTC VTC domain 1.2E-82 225 500
PF02656 DUF202 Domain of unknown function (DUF202) 1.9E-10 653 716

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q02725|VTC3_YEAST Vacuolar transporter chaperone 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC3 PE=1 SV=1 1 760 3.0E-133
sp|O13718|VTC2_SCHPO Vacuolar transporter chaperone 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc2 PE=1 SV=1 1 756 9.0E-132
sp|P43585|VTC2_YEAST Vacuolar transporter chaperone 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC2 PE=1 SV=1 1 752 7.0E-123
sp|P78810|VTC4_SCHPO Vacuolar transporter chaperone 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc4 PE=1 SV=2 1 752 1.0E-100
sp|P47075|VTC4_YEAST Vacuolar transporter chaperone 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC4 PE=1 SV=2 1 747 1.0E-99
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q02725|VTC3_YEAST Vacuolar transporter chaperone 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC3 PE=1 SV=1 1 760 3.0E-133
sp|O13718|VTC2_SCHPO Vacuolar transporter chaperone 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc2 PE=1 SV=1 1 756 9.0E-132
sp|P43585|VTC2_YEAST Vacuolar transporter chaperone 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC2 PE=1 SV=1 1 752 7.0E-123
sp|P78810|VTC4_SCHPO Vacuolar transporter chaperone 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc4 PE=1 SV=2 1 752 1.0E-100
sp|P47075|VTC4_YEAST Vacuolar transporter chaperone 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC4 PE=1 SV=2 1 747 1.0E-99
sp|Q9UR17|VTC1_SCHPO Vacuolar transporter chaperone 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nrf1 PE=2 SV=1 648 750 3.0E-11
sp|A8DZH4|XPR1_DANRE Xenotropic and polytropic retrovirus receptor 1 homolog OS=Danio rerio GN=xpr1 PE=3 SV=1 1 215 2.0E-08
sp|Q9R031|XPR1_MUSMC Xenotropic and polytropic retrovirus receptor 1 homolog OS=Mus musculus castaneus GN=Xpr1 PE=2 SV=1 1 215 1.0E-07
sp|Q9QZ71|XPR1_MUSTR Xenotropic and polytropic retrovirus receptor 1 OS=Mus terricolor GN=Xpr1 PE=1 SV=1 1 215 3.0E-07
sp|Q9Z0U0|XPR1_MOUSE Xenotropic and polytropic retrovirus receptor 1 OS=Mus musculus GN=Xpr1 PE=1 SV=1 1 215 3.0E-07
sp|A7XZ53|XPR1_MUSPA Xenotropic and polytropic retrovirus receptor 1 homolog OS=Mus pahari GN=Xpr1 PE=1 SV=1 1 215 4.0E-07
sp|Q9R032|XPR1_MUSSP Xenotropic and polytropic retrovirus receptor 1 OS=Mus spretus GN=Xpr1 PE=1 SV=1 1 215 8.0E-07
sp|Q9UBH6|XPR1_HUMAN Xenotropic and polytropic retrovirus receptor 1 OS=Homo sapiens GN=XPR1 PE=1 SV=1 1 215 1.0E-06
sp|Q9QZ70|XPR1_CRIGR Xenotropic and polytropic retrovirus receptor 1 homolog OS=Cricetulus griseus GN=XPR1 PE=2 SV=1 1 215 1.0E-06
sp|Q28CY9|XPR1_XENTR Xenotropic and polytropic retrovirus receptor 1 homolog OS=Xenopus tropicalis GN=xpr1 PE=2 SV=1 1 215 3.0E-06
sp|P40046|VTC1_YEAST Vacuolar transporter chaperone 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC1 PE=1 SV=3 649 752 4.0E-06
sp|Q6DD44|XPR1_XENLA Xenotropic and polytropic retrovirus receptor 1 homolog OS=Xenopus laevis GN=xpr1 PE=2 SV=1 1 215 7.0E-06
[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 53 0.45

Transmembrane Domains

Domain # Start End Length
1 688 710 22
2 730 752 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7087
MRFGKTLREAVYEPWKEEYMDYGKLKALLHEDKAEEEEWTEEDEKRFCDEIFSTQLDKVARFQQQRFDELQRRVD
KAFRTLSELVPVEQEAVKDDKQPAADRKGDGDSDGQAATASRLRELEAELDDITNEVRELKKYSSINYTGFLKMV
KKHDRKRGDRYRVRPMMQLALAQRPFNSEQGYSPLLNKLSIMYFAIRQQLEGGGGSQAPPDLESPGETLHGERYT
AHKFWIHGDNLVEVKTLILRRLPALVYSEQSAKELDGRDSPAITSLYLDNHKFDLYSEKVDRKSEASTLRLRWYG
QLSGRPDIFVEHKTVDAKGNSQEHNFSTKDKYIMPLLKGDNVTDKTAQKMERQGVSAEQVQGYKATVAQTQALIR
QKKLSPVLRANYVRTAFQKPADDRVRISIDADLVFIREDTLDASRPCRDPEEWHRLDIDNSNMTYPFKNMSQSDV
SNFPYAVLQIKLKEDGNRKRPSWVEDLMASHLVHPAPRFSKFVHGVASLFDDYVNNLPFWLSDLERDIRKDPQRA
FEEEEQRRAQRADDVQAVGSLLGGTKPSYKAAQSSPVGDSYLAERAAADSKASQSRWLGRLTAGEERGESSTAAQ
RRSGPGGYGTLSSVFPGLSLSKYSRAQRGRLPEGVVKPTQWIKNTGELKIEPKVWLANERTFLKWQHICVLQGSL
ALGLYTAAGNDTAAAVMSIVLVAIAAFAGLWGYWLLRTRRRMITERSGKDFDKMLGPMVMSGALMAALMMNFVLQ
YQKFVERVGGTSQGRGGLASDEL
Coding >Ophio5|7087
ATGCGGTTCGGCAAGACGCTGCGGGAGGCCGTGTACGAGCCATGGAAGGAAGAGTACATGGACTATGGCAAGCTC
AAGGCGCTGCTGCACGAGGACAAGGCCGAGGAAGAAGAGTGGACCGAGGAGGACGAGAAGCGCTTCTGCGACGAA
ATCTTCAGCACCCAGCTTGACAAGGTGGCGCGCTTCCAGCAGCAGCGATTTGACGAGCTGCAGCGGCGCGTCGAC
AAGGCTTTCCGCACCTTAAGCGAGCTGGTTCCGGTTGAACAAGAGGCCGTCAAAGACGACAAGCAGCCAGCGGCC
GACAGAAAAGGCGACGGCGACAGCGACGGCCAGGCGGCGACGGCATCGCGCTTGCGGGAGCTCGAAGCCGAGCTC
GACGACATCACCAACGAGGTCAGAGAGCTCAAAAAGTACAGCAGCATCAACTACACCGGCTTCCTCAAGATGGTC
AAGAAGCACGACCGCAAGCGCGGCGACCGCTACCGCGTGCGGCCCATGATGCAGCTGGCCCTGGCGCAGCGGCCC
TTTAACTCGGAGCAGGGCTACTCTCCTCTCCTCAACAAGCTGTCCATCATGTACTTTGCCATCCGTCAACAGCTG
GAGGGTGGCGGCGGCAGCCAGGCGCCACCGGACCTCGAGAGCCCGGGCGAGACGCTTCACGGCGAGCGATACACG
GCCCACAAATTCTGGATCCATGGCGATAACCTCGTCGAGGTCAAGACGTTGATTCTCCGCCGGCTGCCAGCCCTC
GTCTACAGCGAGCAGTCGGCCAAAGAGCTGGACGGCAGGGACTCGCCCGCCATCACGTCACTGTATCTAGACAAC
CACAAGTTCGACCTCTACTCGGAAAAGGTGGACCGGAAATCCGAGGCCTCGACGCTCCGGCTGCGGTGGTACGGC
CAGCTCAGCGGCCGGCCCGACATTTTCGTCGAGCACAAGACGGTGGACGCCAAGGGCAACAGCCAGGAGCACAAC
TTTTCGACAAAGGACAAGTACATCATGCCCCTGCTCAAGGGCGACAACGTGACGGACAAGACGGCGCAGAAGATG
GAGCGGCAGGGCGTGTCGGCCGAGCAGGTCCAAGGCTACAAGGCGACGGTGGCGCAGACGCAGGCCCTGATTCGA
CAGAAGAAGCTATCGCCGGTGCTGAGGGCCAACTACGTCCGCACGGCGTTCCAGAAGCCGGCCGACGACCGGGTC
CGCATCTCCATCGACGCGGACCTGGTCTTTATCCGCGAGGACACGCTCGACGCCAGCCGTCCGTGTCGCGACCCC
GAGGAATGGCACCGGCTGGACATTGATAACAGCAACATGACGTATCCATTCAAGAATATGAGTCAGAGTGACGTG
TCCAATTTCCCCTACGCGGTGCTGCAGATCAAGCTCAAGGAGGACGGCAACCGGAAGCGGCCGTCGTGGGTCGAG
GACCTGATGGCCTCGCACCTGGTGCATCCGGCGCCGCGATTCTCCAAGTTCGTGCACGGCGTCGCGTCGCTCTTC
GACGACTACGTCAACAACCTGCCCTTTTGGCTGAGCGACCTGGAGAGGGACATCCGCAAGGACCCGCAGAGGGCC
TTTGAGGAGGAGGAGCAGCGGCGAGCGCAGCGGGCCGACGACGTCCAGGCCGTCGGCAGCCTCCTGGGGGGCACC
AAGCCGTCGTACAAGGCAGCGCAGAGCTCGCCGGTTGGGGACTCGTACCTCGCCGAGCGGGCCGCGGCCGACTCC
AAGGCGTCCCAGTCCCGTTGGCTCGGCAGGCTGACGGCGGGTGAAGAGCGCGGCGAGTCTTCGACGGCGGCTCAG
CGGCGGAGCGGCCCAGGCGGCTACGGAACGCTCTCGTCCGTCTTCCCGGGCCTCTCCCTGTCCAAGTACTCGCGG
GCCCAGCGCGGACGGCTGCCGGAGGGCGTGGTGAAGCCGACGCAGTGGATCAAGAACACGGGGGAGCTCAAGATC
GAGCCCAAGGTGTGGCTGGCCAACGAGCGCACCTTTCTCAAGTGGCAGCACATCTGCGTGCTGCAGGGGAGCCTG
GCCTTGGGGCTCTACACGGCCGCGGGCAACGACACGGCGGCCGCCGTCATGAGCATCGTCTTGGTCGCCATTGCA
GCCTTTGCGGGCCTCTGGGGGTACTGGCTGCTGCGGACGCGGAGGAGGATGATTACGGAGAGGAGCGGAAAGGAC
TTTGACAAGATGCTGGGGCCCATGGTTATGAGCGGGGCGTTGATGGCGGCGCTGATGATGAATTTTGTCCTGCAG
TATCAAAAGTTTGTCGAGAGGGTTGGAGGGACGAGTCAAGGACGGGGGGGACTGGCATCGGATGAGCTG
Transcript >Ophio5|7087
ATGCGGTTCGGCAAGACGCTGCGGGAGGCCGTGTACGAGCCATGGAAGGAAGAGTACATGGACTATGGCAAGCTC
AAGGCGCTGCTGCACGAGGACAAGGCCGAGGAAGAAGAGTGGACCGAGGAGGACGAGAAGCGCTTCTGCGACGAA
ATCTTCAGCACCCAGCTTGACAAGGTGGCGCGCTTCCAGCAGCAGCGATTTGACGAGCTGCAGCGGCGCGTCGAC
AAGGCTTTCCGCACCTTAAGCGAGCTGGTTCCGGTTGAACAAGAGGCCGTCAAAGACGACAAGCAGCCAGCGGCC
GACAGAAAAGGCGACGGCGACAGCGACGGCCAGGCGGCGACGGCATCGCGCTTGCGGGAGCTCGAAGCCGAGCTC
GACGACATCACCAACGAGGTCAGAGAGCTCAAAAAGTACAGCAGCATCAACTACACCGGCTTCCTCAAGATGGTC
AAGAAGCACGACCGCAAGCGCGGCGACCGCTACCGCGTGCGGCCCATGATGCAGCTGGCCCTGGCGCAGCGGCCC
TTTAACTCGGAGCAGGGCTACTCTCCTCTCCTCAACAAGCTGTCCATCATGTACTTTGCCATCCGTCAACAGCTG
GAGGGTGGCGGCGGCAGCCAGGCGCCACCGGACCTCGAGAGCCCGGGCGAGACGCTTCACGGCGAGCGATACACG
GCCCACAAATTCTGGATCCATGGCGATAACCTCGTCGAGGTCAAGACGTTGATTCTCCGCCGGCTGCCAGCCCTC
GTCTACAGCGAGCAGTCGGCCAAAGAGCTGGACGGCAGGGACTCGCCCGCCATCACGTCACTGTATCTAGACAAC
CACAAGTTCGACCTCTACTCGGAAAAGGTGGACCGGAAATCCGAGGCCTCGACGCTCCGGCTGCGGTGGTACGGC
CAGCTCAGCGGCCGGCCCGACATTTTCGTCGAGCACAAGACGGTGGACGCCAAGGGCAACAGCCAGGAGCACAAC
TTTTCGACAAAGGACAAGTACATCATGCCCCTGCTCAAGGGCGACAACGTGACGGACAAGACGGCGCAGAAGATG
GAGCGGCAGGGCGTGTCGGCCGAGCAGGTCCAAGGCTACAAGGCGACGGTGGCGCAGACGCAGGCCCTGATTCGA
CAGAAGAAGCTATCGCCGGTGCTGAGGGCCAACTACGTCCGCACGGCGTTCCAGAAGCCGGCCGACGACCGGGTC
CGCATCTCCATCGACGCGGACCTGGTCTTTATCCGCGAGGACACGCTCGACGCCAGCCGTCCGTGTCGCGACCCC
GAGGAATGGCACCGGCTGGACATTGATAACAGCAACATGACGTATCCATTCAAGAATATGAGTCAGAGTGACGTG
TCCAATTTCCCCTACGCGGTGCTGCAGATCAAGCTCAAGGAGGACGGCAACCGGAAGCGGCCGTCGTGGGTCGAG
GACCTGATGGCCTCGCACCTGGTGCATCCGGCGCCGCGATTCTCCAAGTTCGTGCACGGCGTCGCGTCGCTCTTC
GACGACTACGTCAACAACCTGCCCTTTTGGCTGAGCGACCTGGAGAGGGACATCCGCAAGGACCCGCAGAGGGCC
TTTGAGGAGGAGGAGCAGCGGCGAGCGCAGCGGGCCGACGACGTCCAGGCCGTCGGCAGCCTCCTGGGGGGCACC
AAGCCGTCGTACAAGGCAGCGCAGAGCTCGCCGGTTGGGGACTCGTACCTCGCCGAGCGGGCCGCGGCCGACTCC
AAGGCGTCCCAGTCCCGTTGGCTCGGCAGGCTGACGGCGGGTGAAGAGCGCGGCGAGTCTTCGACGGCGGCTCAG
CGGCGGAGCGGCCCAGGCGGCTACGGAACGCTCTCGTCCGTCTTCCCGGGCCTCTCCCTGTCCAAGTACTCGCGG
GCCCAGCGCGGACGGCTGCCGGAGGGCGTGGTGAAGCCGACGCAGTGGATCAAGAACACGGGGGAGCTCAAGATC
GAGCCCAAGGTGTGGCTGGCCAACGAGCGCACCTTTCTCAAGTGGCAGCACATCTGCGTGCTGCAGGGGAGCCTG
GCCTTGGGGCTCTACACGGCCGCGGGCAACGACACGGCGGCCGCCGTCATGAGCATCGTCTTGGTCGCCATTGCA
GCCTTTGCGGGCCTCTGGGGGTACTGGCTGCTGCGGACGCGGAGGAGGATGATTACGGAGAGGAGCGGAAAGGAC
TTTGACAAGATGCTGGGGCCCATGGTTATGAGCGGGGCGTTGATGGCGGCGCTGATGATGAATTTTGTCCTGCAG
TATCAAAAGTTTGTCGAGAGGGTTGGAGGGACGAGTCAAGGACGGGGGGGACTGGCATCGGATGAGCTGTAG
Gene >Ophio5|7087
ATGCGGTTCGGCAAGACGCTGCGGGAGGCCGTGTACGAGCCATGGAAGGAAGAGTACATGGACTATGGCAAGCTC
AAGGCGCTGCTGCACGAGGACAAGGCCGAGGAAGAAGAGTGGACCGAGGAGGACGAGAAGCGCTTCTGCGACGAA
ATCTTCAGCACCCAGCTTGACAAGGTGGCGCGCTTCCAGCAGCAGCGATTTGACGAGCTGCAGCGGCGCGTCGAC
AAGGCTTTCCGCACCTTAAGCGAGCTGGTTCCGGTTGAACAAGAGGCCGTCAAAGACGACAAGCAGCCAGCGGCC
GACAGAAAAGGCGACGGCGACAGCGACGGCCAGGCGGCGACGGCATCGCGCTTGCGGGAGCTCGAAGCCGAGCTC
GACGACATCACCAACGAGGTCAGAGAGCTCAAAAAGTACAGCAGCATCAACTACACCGGCTTCCTCAAGATGGTC
AAGAAGCACGACCGCAAGCGCGGCGACCGCTACCGCGTGCGGCCCATGATGCAGCTGGCCCTGGCGCAGCGGCCC
TTTAACTCGGAGCAGGGCTACTCTCCTCTCCTCAACAAGCTGTCCATCATGTACTTTGCCATCCGTCAACAGCTG
GAGGGTGGCGGCGGCAGCCAGGCGCCACCGGACCTCGAGAGCCCGGGCGAGACGCTTCACGGCGAGCGATACACG
GCCCACAAATGTGAGTCCTGGGGTTGTCTTGTTGGAGGAGCCATTCATCATCAGGCCGCTGACGCGCCGCCTCGG
CAGTCTGGATCCATGGCGATAACCTCGTCGAGGTCAAGACGTTGATTCTCCGCCGGCTGCCAGCCCTCGTCTACA
GCGAGCAGTCGGCCAAAGAGCTGGACGGCAGGGACTCGCCCGCCATCACGTCACTGTATCTAGACAACCACAAGT
TCGACCTCTACTCGGAAAAGGTGGACCGGAAATCCGAGGCCTCGACGCTCCGGCTGCGGTGGTACGGCCAGCTCA
GCGGCCGGCCCGACATTTTCGTCGAGCACAAGACGGTGGACGCCAAGGGCAACAGCCAGGAGCACAACTTTTCGA
CAAAGGACAAGTACATCATGCCCCTGCTCAAGGGCGACAACGTGACGGACAAGACGGCGCAGAAGATGGAGCGGC
AGGGCGTGTCGGCCGAGCAGGTCCAAGGCTACAAGGCGACGGTGGCGCAGACGCAGGCCCTGATTCGACAGAAGA
AGCTATCGCCGGTGCTGAGGGCCAACTACGTCCGCACGGCGTTCCAGAAGCCGGCCGACGACCGGGTCCGCATCT
CCATCGACGCGGACCTGGTCTTTATCCGCGAGGACACGCTCGACGCCAGCCGTCCGTGTCGCGACCCCGAGGAAT
GGCACCGGCTGGACATTGATAACAGCAACATGACGTATCCATTCAAGAATATGAGTCAGAGTGACGTGTCCAATT
TCCCCTACGCGGTGCTGCAGATCAAGCTCAAGGAGGACGGCAACCGGAAGCGGCCGTCGTGGGTCGAGGACCTGA
TGGCCTCGCACCTGGTGCATCCGGCGCCGCGATTCTCCAAGTTCGTGCACGGCGTCGCGTCGCTCTTCGACGACT
ACGTCAACAACCTGCCCTTTTGGCTGAGCGACCTGGAGAGGGACATCCGCAAGGACCCGCAGAGGGCCTTTGAGG
AGGAGGAGCAGCGGCGAGCGCAGCGGGCCGACGACGTCCAGGCCGTCGGCAGCCTCCTGGGGGGCACCAAGCCGT
CGTACAAGGCAGCGCAGAGCTCGCCGGTTGGGGACTCGTACCTCGCCGAGCGGGCCGCGGCCGACTCCAAGGCGT
CCCAGTCCCGTTGGCTCGGCAGGCTGACGGCGGGTGAAGAGCGCGGCGAGTCTTCGACGGCGGCTCAGCGGCGGA
GCGGCCCAGGCGGCTACGGAACGCTCTCGTCCGTCTTCCCGGGCCTCTCCCTGTCCAAGTACTCGCGGGCCCAGC
GCGGACGGCTGCCGGAGGGCGTGGTGAAGCCGACGCAGTGGATCAAGAACACGGGGGAGCTCAAGATCGAGCCCA
AGGTGTGGCTGGCCAACGAGCGCACCTTTCTCAAGTGGCAGCACATCTGCGTGCTGCAGGGGAGCCTGGCCTTGG
GGCTCTACACGGCCGCGGGCAACGACACGGCGGCCGCCGTCATGAGCATCGTCTTGGTCGCCATTGCAGCCTTTG
CGGGCCTCTGGGGGTACTGGCTGCTGCGGACGCGGAGGAGGATGATTACGGAGAGGAGCGGAAAGGACTTTGACA
AGATGCTGGGGCCCATGGTTATGAGCGGGGCGTTGATGGCGGCGCTGATGATGAATTTTGTCCTGCAGGTGAGTG
ATATTTTGATGGGAGAGCGAGAGAGAGAGAGAGAGAGATGGAGAGATGACGAGTGAGTGAGTGTGTGCTGACGCT
GGACATGCAGTATCAAAAGTTTGTCGAGAGGGTTGGAGGGACGAGTCAAGGACGGGGGGGACTGGCATCGGATGA
GCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail