Protein ID | Ophio5|7058 |
Gene name | |
Location | scaffold_653:7242..9003 |
Strand | + |
Gene length (bp) | 1761 |
Transcript length (bp) | 1689 |
Coding sequence length (bp) | 1686 |
Protein length (aa) | 562 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 41 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 153 | 175 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 93.00 | 50.01 | 136.00 |
CcL | In ants, during behavior modification | 64.11 | 34.84 | 93.38 |
CcD | In ants, recently dead | 44.49 | 24.28 | 64.71 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.105440 | no |
SC16a | CcD | 0.000535 | yes |
CcL | CcD | 0.106625 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|7058 MKAPPRLSPDYLCPAAERHLSTSLSLSAEIILSVPPELSSDFNSSRPSAMTPSLAARGITASLRSPRGSCLGRAL PPHPSSLSPVACRCLTVHQPRRYASSDHPELPSPPTPPPRMTRLQFLVKLFRVSFQNLAVALSPRGIRSAYRDSP ATMVMAISILAGLGLFSYWGFNFIIQTFYREEICRYPDPIANSLRRALYYSIIHPDNELALRYYKKAMEQCVEIG FEPFSDEVLGIRIQVAGWLEKIDRHKTAAHVLETVLTDCMKWIAAMEQCVKDDKVDDAGRYRPADDEMADEMAHD MAHDMADEKTETLWRKRQRLLRKAVGTSLKLGELYADEHVLEPDKAHAKLVWAVETSLREFQRRQRQGPKPGEQD WLKTEELGASLESLGRDYTQRGQSQLAIPLLFRALRMCESACQRAVIMNNLAVAFAQQPLFAPEGPVKTSDDASD GPLDTTKTPDSLMIMTRRESLEAALNWAQNAHRHAVDVQGDDRTPSCDQACAAALCTWADVAATQGKVELARAKY GECMEMSRDIGFLPGFKHASKGIAQLDGQVKRGLARS |
Coding | >Ophio5|7058 ATGAAAGCCCCGCCCCGCCTTTCCCCGGACTATCTCTGCCCGGCTGCCGAGCGTCACCTCTCCACATCTCTCTCT CTCTCTGCCGAGATAATCTTATCAGTCCCCCCGGAGCTCTCTTCAGACTTCAACTCGTCGAGACCATCAGCAATG ACGCCCTCGTTGGCGGCCCGCGGCATCACGGCGTCTCTGCGCTCACCCCGGGGCTCGTGCCTTGGCCGCGCCTTA CCGCCTCATCCGTCGTCTCTCAGCCCTGTCGCCTGCCGCTGCTTGACCGTCCATCAGCCACGCCGCTATGCCTCG TCAGACCATCCCGAGCTTCCTTCTCCTCCGACGCCGCCGCCGAGGATGACGAGGCTTCAATTTCTCGTCAAGCTA TTTCGCGTCAGCTTCCAGAACCTGGCCGTGGCATTGAGTCCGCGCGGTATCCGCTCAGCCTACCGCGACTCGCCC GCCACCATGGTCATGGCCATCTCCATTCTTGCCGGCCTCGGGCTGTTCTCTTACTGGGGTTTCAACTTCATCATC CAGACCTTTTACCGCGAGGAGATTTGCCGGTACCCCGACCCCATCGCCAACTCGCTGCGTCGCGCCCTCTACTAT AGCATCATCCATCCCGATAACGAGCTGGCCCTGCGCTACTACAAAAAGGCCATGGAGCAGTGCGTCGAGATTGGA TTCGAACCCTTCTCGGACGAGGTGCTCGGCATACGCATTCAAGTCGCCGGCTGGCTCGAGAAGATAGACAGGCAC AAGACGGCCGCCCACGTTCTCGAGACGGTCCTGACAGACTGCATGAAGTGGATTGCCGCCATGGAACAATGTGTC AAGGACGACAAGGTGGACGATGCCGGCAGGTACCGGCCCGCCGACGACGAGATGGCGGACGAGATGGCACACGAC ATGGCACACGACATGGCGGACGAGAAGACGGAGACGCTATGGCGCAAGCGGCAACGGCTTTTGCGCAAGGCCGTC GGCACCAGCCTCAAGCTCGGCGAGCTCTACGCCGACGAGCACGTGCTCGAGCCCGACAAGGCGCATGCCAAACTT GTATGGGCCGTCGAGACGTCGCTGCGCGAGTTCCAACGGCGGCAGCGCCAGGGCCCCAAGCCGGGCGAGCAGGAC TGGCTCAAGACGGAAGAGCTGGGTGCTTCGCTGGAGTCGCTGGGGCGAGACTACACGCAGAGAGGCCAGTCGCAG CTAGCCATTCCCCTGCTGTTCCGTGCGTTACGCATGTGCGAAAGCGCGTGCCAGCGGGCCGTCATCATGAACAAC CTGGCCGTCGCCTTCGCCCAGCAGCCACTGTTTGCGCCCGAGGGACCGGTCAAGACTTCCGATGACGCGTCCGAT GGGCCGTTGGACACGACGAAGACGCCGGACTCGCTCATGATCATGACGCGCCGTGAAAGCCTCGAGGCGGCCTTG AACTGGGCGCAAAACGCGCACAGGCACGCGGTGGACGTGCAGGGCGACGACAGGACGCCCTCGTGTGACCAGGCG TGCGCCGCGGCGTTATGCACTTGGGCCGACGTGGCGGCGACGCAGGGCAAGGTCGAGCTGGCCCGTGCCAAGTAC GGCGAGTGCATGGAGATGAGCCGCGACATTGGCTTTCTCCCGGGCTTTAAGCACGCCAGCAAGGGGATCGCCCAG CTCGACGGCCAAGTCAAGCGAGGCCTGGCCAGGTCT |
Transcript | >Ophio5|7058 ATGAAAGCCCCGCCCCGCCTTTCCCCGGACTATCTCTGCCCGGCTGCCGAGCGTCACCTCTCCACATCTCTCTCT CTCTCTGCCGAGATAATCTTATCAGTCCCCCCGGAGCTCTCTTCAGACTTCAACTCGTCGAGACCATCAGCAATG ACGCCCTCGTTGGCGGCCCGCGGCATCACGGCGTCTCTGCGCTCACCCCGGGGCTCGTGCCTTGGCCGCGCCTTA CCGCCTCATCCGTCGTCTCTCAGCCCTGTCGCCTGCCGCTGCTTGACCGTCCATCAGCCACGCCGCTATGCCTCG TCAGACCATCCCGAGCTTCCTTCTCCTCCGACGCCGCCGCCGAGGATGACGAGGCTTCAATTTCTCGTCAAGCTA TTTCGCGTCAGCTTCCAGAACCTGGCCGTGGCATTGAGTCCGCGCGGTATCCGCTCAGCCTACCGCGACTCGCCC GCCACCATGGTCATGGCCATCTCCATTCTTGCCGGCCTCGGGCTGTTCTCTTACTGGGGTTTCAACTTCATCATC CAGACCTTTTACCGCGAGGAGATTTGCCGGTACCCCGACCCCATCGCCAACTCGCTGCGTCGCGCCCTCTACTAT AGCATCATCCATCCCGATAACGAGCTGGCCCTGCGCTACTACAAAAAGGCCATGGAGCAGTGCGTCGAGATTGGA TTCGAACCCTTCTCGGACGAGGTGCTCGGCATACGCATTCAAGTCGCCGGCTGGCTCGAGAAGATAGACAGGCAC AAGACGGCCGCCCACGTTCTCGAGACGGTCCTGACAGACTGCATGAAGTGGATTGCCGCCATGGAACAATGTGTC AAGGACGACAAGGTGGACGATGCCGGCAGGTACCGGCCCGCCGACGACGAGATGGCGGACGAGATGGCACACGAC ATGGCACACGACATGGCGGACGAGAAGACGGAGACGCTATGGCGCAAGCGGCAACGGCTTTTGCGCAAGGCCGTC GGCACCAGCCTCAAGCTCGGCGAGCTCTACGCCGACGAGCACGTGCTCGAGCCCGACAAGGCGCATGCCAAACTT GTATGGGCCGTCGAGACGTCGCTGCGCGAGTTCCAACGGCGGCAGCGCCAGGGCCCCAAGCCGGGCGAGCAGGAC TGGCTCAAGACGGAAGAGCTGGGTGCTTCGCTGGAGTCGCTGGGGCGAGACTACACGCAGAGAGGCCAGTCGCAG CTAGCCATTCCCCTGCTGTTCCGTGCGTTACGCATGTGCGAAAGCGCGTGCCAGCGGGCCGTCATCATGAACAAC CTGGCCGTCGCCTTCGCCCAGCAGCCACTGTTTGCGCCCGAGGGACCGGTCAAGACTTCCGATGACGCGTCCGAT GGGCCGTTGGACACGACGAAGACGCCGGACTCGCTCATGATCATGACGCGCCGTGAAAGCCTCGAGGCGGCCTTG AACTGGGCGCAAAACGCGCACAGGCACGCGGTGGACGTGCAGGGCGACGACAGGACGCCCTCGTGTGACCAGGCG TGCGCCGCGGCGTTATGCACTTGGGCCGACGTGGCGGCGACGCAGGGCAAGGTCGAGCTGGCCCGTGCCAAGTAC GGCGAGTGCATGGAGATGAGCCGCGACATTGGCTTTCTCCCGGGCTTTAAGCACGCCAGCAAGGGGATCGCCCAG CTCGACGGCCAAGTCAAGCGAGGCCTGGCCAGGTCTTGA |
Gene | >Ophio5|7058 ATGAAAGCCCCGCCCCGCCTTTCCCCGGACTATCTCTGCCCGGCTGCCGAGCGTCACCTCTCCACATCTCTCTCT CTCTCTGCCGAGATAATCTTATCAGTCCCCCCGGAGCTCTCTTCAGACTTCAACTCGTCGAGACCATCAGCAATG ACGCCCTCGTTGGCGGCCCGCGGCATCACGGCGTCTCTGCGCTCACCCCGGGGCTCGTGCCTTGGCCGCGCCTTA CCGCCTCATCCGTCGTCTCTCAGCCCTGTCGCCTGCCGCTGCTTGACCGTCCATCAGCCACGCCGCTATGCCTCG TCAGACCATCCCGAGCTTCCTTCTCCTCCGACGCCGCCGCCGAGGATGACGAGGCTTCAATTTCTCGTCAAGCTA TTTCGCGTCAGCTTCCAGAACCTGGCCGTGGCATTGAGTCCGCGCGGTATCCGCTCAGCCTACCGCGACTCGCCC GCCACCATGGTCATGGCCATCTCCATGTGAGTCGACGCGACTTCGACTGAGGACCAAAGTTGCTGATATGAGCTG GGGGATCGAAAAAAAAAAAAAAGTCTTGCCGGCCTCGGGCTGTTCTCTTACTGGGGTTTCAACTTCATCATCCAG ACCTTTTACCGCGAGGAGATTTGCCGGTACCCCGACCCCATCGCCAACTCGCTGCGTCGCGCCCTCTACTATAGC ATCATCCATCCCGATAACGAGCTGGCCCTGCGCTACTACAAAAAGGCCATGGAGCAGTGCGTCGAGATTGGATTC GAACCCTTCTCGGACGAGGTGCTCGGCATACGCATTCAAGTCGCCGGCTGGCTCGAGAAGATAGACAGGCACAAG ACGGCCGCCCACGTTCTCGAGACGGTCCTGACAGACTGCATGAAGTGGATTGCCGCCATGGAACAATGTGTCAAG GACGACAAGGTGGACGATGCCGGCAGGTACCGGCCCGCCGACGACGAGATGGCGGACGAGATGGCACACGACATG GCACACGACATGGCGGACGAGAAGACGGAGACGCTATGGCGCAAGCGGCAACGGCTTTTGCGCAAGGCCGTCGGC ACCAGCCTCAAGCTCGGCGAGCTCTACGCCGACGAGCACGTGCTCGAGCCCGACAAGGCGCATGCCAAACTTGTA TGGGCCGTCGAGACGTCGCTGCGCGAGTTCCAACGGCGGCAGCGCCAGGGCCCCAAGCCGGGCGAGCAGGACTGG CTCAAGACGGAAGAGCTGGGTGCTTCGCTGGAGTCGCTGGGGCGAGACTACACGCAGAGAGGCCAGTCGCAGCTA GCCATTCCCCTGCTGTTCCGTGCGTTACGCATGTGCGAAAGCGCGTGCCAGCGGGCCGTCATCATGAACAACCTG GCCGTCGCCTTCGCCCAGCAGCCACTGTTTGCGCCCGAGGGACCGGTCAAGACTTCCGATGACGCGTCCGATGGG CCGTTGGACACGACGAAGACGCCGGACTCGCTCATGATCATGACGCGCCGTGAAAGCCTCGAGGCGGCCTTGAAC TGGGCGCAAAACGCGCACAGGCACGCGGTGGACGTGCAGGGCGACGACAGGACGCCCTCGTGTGACCAGGCGTGC GCCGCGGCGTTATGCACTTGGGCCGACGTGGCGGCGACGCAGGGCAAGGTCGAGCTGGCCCGTGCCAAGTACGGC GAGTGCATGGAGATGAGCCGCGACATTGGCTTTCTCCCGGGCTTTAAGCACGCCAGCAAGGGGATCGCCCAGCTC GACGGCCAAGTCAAGCGAGGCCTGGCCAGGTCTTGA |