Protein ID | Ophio5|7047 |
Gene name | |
Location | scaffold_650:7336..10089 |
Strand | + |
Gene length (bp) | 2753 |
Transcript length (bp) | 2694 |
Coding sequence length (bp) | 2691 |
Protein length (aa) | 897 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00350 | Dynamin_N | Dynamin family | 4.3E-17 | 259 | 429 |
PF01926 | MMR_HSR1 | 50S ribosome-binding GTPase | 7.2E-09 | 258 | 429 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9USY7|FZO1_SCHPO | Transmembrane GTPase fzo1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fzo1 PE=3 SV=1 | 89 | 890 | 9.0E-127 |
sp|P38297|FZO1_YEAST | Mitofusin FZO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FZO1 PE=1 SV=1 | 202 | 890 | 9.0E-119 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005525 | GTP binding | Yes |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0017076 | purine nucleotide binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0032561 | guanyl ribonucleotide binding | No |
GO:0043168 | anion binding | No |
GO:0043167 | ion binding | No |
GO:0003674 | molecular_function | No |
GO:0032553 | ribonucleotide binding | No |
GO:0036094 | small molecule binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0000166 | nucleotide binding | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0019001 | guanyl nucleotide binding | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0005488 | binding | No |
GO:0097159 | organic cyclic compound binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 63 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 114.96 | 56.55 | 173.36 |
CcL | In ants, during behavior modification | 127.30 | 60.58 | 194.01 |
CcD | In ants, recently dead | 139.10 | 66.04 | 212.16 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.736345 | no |
SC16a | CcD | 0.495361 | no |
CcL | CcD | 0.773477 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|7047 MSQDYFSGKGKSRARGDSDADAQQSAAPPNYLTVGTGSTSEHASRLLNMLDVDSGYGGSVSGEEPRAAMARASRT EAVHHDRPQAGVLHQMWYNSQRATLGRSINKVLDLLQNLREMNTAWPAHYPSVQRDATSERPSSRPGIPHTQSTM EGFAGANPAHGDFPTPLRRSMTTVEASSAESSRAAENRPAPEPRLVSPQIAQEFSILKLDLKLGSFNQVELVHSL EKGSIASLLDGKISSSMKHLLSLRERIEDTSSKVLITGDLNAGKSTFCNALLRRKLLPEDQQPCTAIFCEVLDAR ANAGIEEVHAVHKDAAYNRNDESTYDVFALVDLEKIVSDNETYTQCKVYVKDIRTIDESLLNNGVVDIALIDAPG LNSDTTKTTAIFARQEEIDVVVFVVSAANHFTQSAKEFIWAAAAEKAYLFIVVNGYDAIRDKDRCQKLILDQVSG LSPRTFKESSELVHFVSSNAIPAGPSPPGGPGGGGSGSSSGGGGDDDPDGGDSGPDKGKGKGKDLDKQRKFEALE QSLRRFVLEKRARSKLAPARTYLLNILNDVNTLATVNQGVAQSELNRVTAELRTLEPQLETSRRAVSEVGDQIDQ EVEDVCKDVYDHTRAEINAAITYAGKSNHDVPYPGFLSAFQYADELKEAMLSHIADAVSDCEEYARNKSVQGVNV IKQLGLLHVGDEFQSLQFRPDVMFRRKRDALARQVDVPTELSDFVDWSTLLQRQEKFAGTGMALTLAGAFVPRIM GMSNWMDQALTATRLLSNENLQRLVLPGIFVAAVAATAYVLQQIPNSLPPRLATKISTQLAELDYVHANSTRISS SVHKVLRYPAETLRVGLDQSVKDLGNRLDETVKVKGESERAAKFFRDLVGESQVQRSMVEAVDLDAPPPGLR |
Coding | >Ophio5|7047 ATGAGCCAAGACTATTTCTCCGGCAAGGGAAAATCCCGCGCGCGCGGCGACTCCGACGCCGACGCGCAGCAAAGC GCCGCGCCTCCCAACTATTTGACCGTCGGCACCGGCTCCACCTCAGAACATGCGTCACGTCTCCTGAATATGCTG GATGTCGACTCCGGCTACGGTGGCAGCGTCTCGGGCGAGGAGCCCCGAGCAGCCATGGCCCGGGCTTCGCGGACC GAAGCCGTGCATCACGATCGCCCCCAGGCCGGCGTCCTACACCAGATGTGGTACAATTCGCAACGAGCCACACTG GGCCGGTCCATCAACAAGGTTCTGGATCTGCTCCAGAACTTGCGGGAGATGAACACAGCGTGGCCGGCACACTAT CCGTCTGTCCAGCGAGATGCCACTTCAGAACGACCCTCGTCACGGCCCGGTATCCCGCACACGCAGTCGACGATG GAGGGGTTTGCCGGTGCAAATCCCGCTCACGGAGATTTCCCGACCCCTCTCCGAAGGTCTATGACCACGGTCGAA GCGTCGTCTGCCGAGTCCAGTCGAGCGGCCGAAAATCGACCGGCTCCTGAGCCACGGCTGGTCTCGCCCCAGATT GCGCAAGAATTTTCGATACTTAAGCTTGACTTGAAACTGGGGTCCTTCAATCAAGTCGAGCTAGTACACTCACTC GAGAAGGGCTCGATTGCGTCGCTCCTCGATGGGAAAATCAGCTCCAGCATGAAGCACCTGCTTTCCCTCCGGGAG CGCATTGAAGACACCTCTAGCAAGGTCCTCATCACAGGGGACCTCAATGCGGGAAAGTCGACTTTCTGCAACGCT CTTCTGCGGCGCAAGCTCTTGCCTGAGGACCAGCAACCCTGTACTGCCATCTTCTGCGAAGTGCTGGACGCGAGG GCCAACGCTGGTATCGAGGAGGTGCACGCGGTTCACAAGGATGCTGCCTACAATCGAAACGATGAGTCGACCTAC GACGTCTTTGCCCTGGTGGACCTGGAGAAGATTGTTAGCGACAACGAAACATACACTCAGTGCAAGGTCTATGTC AAGGATATCAGAACCATCGATGAATCCTTACTGAATAACGGAGTTGTGGACATTGCACTCATCGACGCGCCCGGC CTCAACTCGGATACGACGAAAACGACGGCCATCTTCGCCAGGCAAGAGGAGATTGACGTCGTGGTTTTCGTCGTG TCTGCGGCCAATCACTTCACGCAGTCGGCCAAGGAGTTCATCTGGGCCGCGGCAGCGGAGAAGGCCTATCTCTTT ATAGTTGTCAACGGCTACGACGCTATTCGAGACAAGGACCGGTGCCAGAAGCTGATATTGGATCAAGTCTCGGGA CTCAGTCCGCGGACGTTCAAAGAGTCGTCAGAGCTCGTTCACTTCGTGTCCAGCAACGCGATCCCTGCCGGCCCG TCGCCTCCAGGCGGACCTGGAGGCGGCGGCAGTGGAAGCTCCAGCGGAGGGGGTGGTGACGATGATCCCGACGGC GGCGACTCCGGCCCCGACAAGGGCAAGGGCAAGGGCAAGGACTTGGACAAGCAACGCAAGTTTGAGGCTCTGGAA CAGTCATTACGGCGGTTCGTGCTGGAGAAGCGTGCGCGTTCCAAGCTTGCGCCCGCGAGGACCTACCTGTTGAAC ATCTTGAACGACGTCAACACTCTGGCCACGGTCAACCAGGGTGTGGCGCAGTCCGAGCTGAACCGAGTCACGGCT GAGCTCAGGACCCTTGAACCGCAGCTGGAGACGAGCAGGAGAGCCGTATCAGAGGTTGGAGATCAAATTGATCAG GAAGTGGAAGATGTCTGCAAAGACGTCTACGATCACACACGTGCCGAGATCAACGCCGCCATCACTTACGCAGGC AAGTCTAACCACGACGTGCCATACCCCGGCTTCTTGAGCGCGTTCCAGTACGCCGACGAGCTTAAGGAGGCCATG CTCTCTCACATAGCCGATGCCGTCAGCGACTGCGAGGAATACGCGCGCAACAAGTCGGTCCAAGGCGTCAACGTC ATCAAGCAGCTCGGACTTCTTCACGTCGGAGACGAATTCCAGAGCCTTCAGTTCCGGCCCGACGTCATGTTCCGC CGCAAGCGCGACGCCCTCGCCCGCCAGGTCGACGTCCCTACCGAGCTGTCGGACTTTGTCGACTGGTCCACGCTC TTACAACGCCAGGAGAAGTTTGCCGGCACGGGCATGGCGCTGACGCTGGCGGGCGCCTTCGTGCCGCGCATCATG GGCATGAGCAACTGGATGGATCAGGCGCTGACGGCGACGCGCCTCCTGAGTAACGAGAACCTGCAGCGGCTCGTA CTCCCCGGCATCTTCGTGGCTGCCGTGGCCGCGACGGCGTACGTCCTACAGCAGATACCCAATTCGCTTCCGCCG CGGCTGGCGACCAAGATCTCGACGCAGCTAGCGGAACTCGACTACGTGCACGCCAACTCGACGCGCATCTCGTCG TCCGTCCACAAGGTGCTCCGCTACCCAGCCGAGACGCTGCGTGTCGGCCTCGACCAGAGCGTAAAGGACCTCGGC AACCGGCTCGACGAGACGGTCAAGGTCAAGGGCGAGAGCGAGCGGGCTGCCAAGTTCTTCCGTGACCTCGTCGGT GAGAGCCAGGTGCAGCGCAGTATGGTCGAGGCCGTGGATCTGGATGCCCCGCCGCCAGGCCTGCGC |
Transcript | >Ophio5|7047 ATGAGCCAAGACTATTTCTCCGGCAAGGGAAAATCCCGCGCGCGCGGCGACTCCGACGCCGACGCGCAGCAAAGC GCCGCGCCTCCCAACTATTTGACCGTCGGCACCGGCTCCACCTCAGAACATGCGTCACGTCTCCTGAATATGCTG GATGTCGACTCCGGCTACGGTGGCAGCGTCTCGGGCGAGGAGCCCCGAGCAGCCATGGCCCGGGCTTCGCGGACC GAAGCCGTGCATCACGATCGCCCCCAGGCCGGCGTCCTACACCAGATGTGGTACAATTCGCAACGAGCCACACTG GGCCGGTCCATCAACAAGGTTCTGGATCTGCTCCAGAACTTGCGGGAGATGAACACAGCGTGGCCGGCACACTAT CCGTCTGTCCAGCGAGATGCCACTTCAGAACGACCCTCGTCACGGCCCGGTATCCCGCACACGCAGTCGACGATG GAGGGGTTTGCCGGTGCAAATCCCGCTCACGGAGATTTCCCGACCCCTCTCCGAAGGTCTATGACCACGGTCGAA GCGTCGTCTGCCGAGTCCAGTCGAGCGGCCGAAAATCGACCGGCTCCTGAGCCACGGCTGGTCTCGCCCCAGATT GCGCAAGAATTTTCGATACTTAAGCTTGACTTGAAACTGGGGTCCTTCAATCAAGTCGAGCTAGTACACTCACTC GAGAAGGGCTCGATTGCGTCGCTCCTCGATGGGAAAATCAGCTCCAGCATGAAGCACCTGCTTTCCCTCCGGGAG CGCATTGAAGACACCTCTAGCAAGGTCCTCATCACAGGGGACCTCAATGCGGGAAAGTCGACTTTCTGCAACGCT CTTCTGCGGCGCAAGCTCTTGCCTGAGGACCAGCAACCCTGTACTGCCATCTTCTGCGAAGTGCTGGACGCGAGG GCCAACGCTGGTATCGAGGAGGTGCACGCGGTTCACAAGGATGCTGCCTACAATCGAAACGATGAGTCGACCTAC GACGTCTTTGCCCTGGTGGACCTGGAGAAGATTGTTAGCGACAACGAAACATACACTCAGTGCAAGGTCTATGTC AAGGATATCAGAACCATCGATGAATCCTTACTGAATAACGGAGTTGTGGACATTGCACTCATCGACGCGCCCGGC CTCAACTCGGATACGACGAAAACGACGGCCATCTTCGCCAGGCAAGAGGAGATTGACGTCGTGGTTTTCGTCGTG TCTGCGGCCAATCACTTCACGCAGTCGGCCAAGGAGTTCATCTGGGCCGCGGCAGCGGAGAAGGCCTATCTCTTT ATAGTTGTCAACGGCTACGACGCTATTCGAGACAAGGACCGGTGCCAGAAGCTGATATTGGATCAAGTCTCGGGA CTCAGTCCGCGGACGTTCAAAGAGTCGTCAGAGCTCGTTCACTTCGTGTCCAGCAACGCGATCCCTGCCGGCCCG TCGCCTCCAGGCGGACCTGGAGGCGGCGGCAGTGGAAGCTCCAGCGGAGGGGGTGGTGACGATGATCCCGACGGC GGCGACTCCGGCCCCGACAAGGGCAAGGGCAAGGGCAAGGACTTGGACAAGCAACGCAAGTTTGAGGCTCTGGAA CAGTCATTACGGCGGTTCGTGCTGGAGAAGCGTGCGCGTTCCAAGCTTGCGCCCGCGAGGACCTACCTGTTGAAC ATCTTGAACGACGTCAACACTCTGGCCACGGTCAACCAGGGTGTGGCGCAGTCCGAGCTGAACCGAGTCACGGCT GAGCTCAGGACCCTTGAACCGCAGCTGGAGACGAGCAGGAGAGCCGTATCAGAGGTTGGAGATCAAATTGATCAG GAAGTGGAAGATGTCTGCAAAGACGTCTACGATCACACACGTGCCGAGATCAACGCCGCCATCACTTACGCAGGC AAGTCTAACCACGACGTGCCATACCCCGGCTTCTTGAGCGCGTTCCAGTACGCCGACGAGCTTAAGGAGGCCATG CTCTCTCACATAGCCGATGCCGTCAGCGACTGCGAGGAATACGCGCGCAACAAGTCGGTCCAAGGCGTCAACGTC ATCAAGCAGCTCGGACTTCTTCACGTCGGAGACGAATTCCAGAGCCTTCAGTTCCGGCCCGACGTCATGTTCCGC CGCAAGCGCGACGCCCTCGCCCGCCAGGTCGACGTCCCTACCGAGCTGTCGGACTTTGTCGACTGGTCCACGCTC TTACAACGCCAGGAGAAGTTTGCCGGCACGGGCATGGCGCTGACGCTGGCGGGCGCCTTCGTGCCGCGCATCATG GGCATGAGCAACTGGATGGATCAGGCGCTGACGGCGACGCGCCTCCTGAGTAACGAGAACCTGCAGCGGCTCGTA CTCCCCGGCATCTTCGTGGCTGCCGTGGCCGCGACGGCGTACGTCCTACAGCAGATACCCAATTCGCTTCCGCCG CGGCTGGCGACCAAGATCTCGACGCAGCTAGCGGAACTCGACTACGTGCACGCCAACTCGACGCGCATCTCGTCG TCCGTCCACAAGGTGCTCCGCTACCCAGCCGAGACGCTGCGTGTCGGCCTCGACCAGAGCGTAAAGGACCTCGGC AACCGGCTCGACGAGACGGTCAAGGTCAAGGGCGAGAGCGAGCGGGCTGCCAAGTTCTTCCGTGACCTCGTCGGT GAGAGCCAGGTGCAGCGCAGTATGGTCGAGGCCGTGGATCTGGATGCCCCGCCGCCAGGCCTGCGCTGA |
Gene | >Ophio5|7047 ATGAGCCAAGACTATTTCTCCGGCAAGGGAAAATCCCGCGCGCGCGGCGACTCCGACGCCGACGCGCAGCAAAGC GCCGCGCCTCCCAACTATTTGACCGTCGGCACCGGCTCCACCTCAGAACATGCGTCACGTCTCCTGAATATGCTG GATGTCGACTCCGGCTACGGTGGCAGCGTCTCGGGCGAGGAGCCCCGAGCAGCCATGGCCCGGGCTTCGCGGACC GAAGCCGTGCATCACGATCGCCCCCAGGCCGGCGTCCTACACCAGATGTGGTACAATTCGCAACGAGCCACACTG GGCCGGTCCATCAACAAGGTTCTGGATCTGCTCCAGAACTTGCGGGAGATGAACACAGCGTGGCCGGCACACTAT CCGTCTGTCCAGCGAGATGCCACTTCAGAACGACCCTCGTCACGGCCCGGTATCCCGCACACGCAGTCGACGATG GAGGGGTTTGCCGGTGCAAATCCCGCTCACGGAGATTTCCCGACCCCTCTCCGAAGGTCTATGACCACGGTCGAA GCGTCGTCTGCCGAGTCCAGTCGAGCGGCCGAAAATCGACCGGCTCCTGAGCCACGGCTGGTCTCGCCCCAGATT GCGCAAGAATTTTCGATACTTAAGCTTGACTTGAAACTGGGGTCCTTCAATCAAGTCGAGCTAGTACACTCACTC GAGAAGGGCTCGATTGCGTCGCTCCTCGATGGGAAAATCAGCTCCAGCATGAAGCACCTGCTTTCCCTCCGGGAG CGCATTGAAGACACCTCTAGCAAGGTCCTCATCACAGGGGACCTCAATGCGGGAAAGTCGACTTTCTGCAACGCT CTTCTGCGGCGCAAGCTCTTGCCTGAGGACCAGCAACCCTGTACTGCCATCTTCTGCGAAGTGCTGGACGCGAGG GCCAACGCTGGTATCGAGGAGGTGCACGCGGTTCACAAGGATGCTGCCTACAATCGAAACGATGAGTCGACCTAC GACGTCTTTGCCCTGGTGGACCTGGAGAAGATTGTTAGCGACAACGAAACATACACTCAGTGCAAGGTCTATGTC AAGGATATCAGAACCATCGATGAATCCTTACTGAATAACGGAGTTGTGGACATTGCACTCATCGACGCGCCCGGC CTCAACTCGGATACGACGAAAACGACGGCCATCTTCGCCAGGCAAGAGGAGATTGACGTCGTGGTTTTCGTCGTG TCTGCGGCCAATCACTTCACGCAGTCGGCCAAGGAGTTCATCTGGGCCGCGGCAGCGGAGAAGGCCTATCTCTTT ATAGTTGTCAACGGCTACGACGCTATTCGAGACAAGGACCGGTGCCAGAAGCTGATATTGGATCAAGTCTCGGGA CTCAGTCCGCGGACGTTCAAAGAGTCGTCAGAGCTCGTTCACTTCGTGTCCAGCAACGCGATCCCTGCCGGCCCG TCGCCTCCAGGCGGACCTGGAGGCGGCGGCAGTGGAAGCTCCAGCGGAGGGGGTGGTGACGATGATCCCGACGGC GGCGACTCCGGCCCCGACAAGGGCAAGGGCAAGGGCAAGGACTTGGACAAGCAACGCAAGTTTGAGGCTCTGGAA CAGTCATTACGGCGGTTCGTGCTGGAGAAGCGTGCGCGTTCCAAGCTTGCGCCCGCGAGGACCTACCTGTTGAAC ATCTTGAACGACGTCAACACTCTGGCCACGGTCAACCAGGGTGTGGCGCAGTCCGAGCTGAACCGAGTCACGGCT GAGCTCAGGACCCTTGAACCGCAGCTGGAGACGAGCAGGAGAGCCGTATCAGAGGTTGGAGATCAAATTGATCAG GAAGTGGAAGATGTCTGCAAAGACGTCTACGATCACACACGTGCCGAGATCAACGCCGCCATCACTTACGCAGGC AAGTCTAACCACGACGTGCCATACCCCGGCTTCTTGAGCGCGTTCCAGTACGCCGACGAGCTTAAGGAGGCCATG CTCTCTCACATAGCCGATGCCGTCAGCGACTGCGAGGAATACGCGCGCAACAAGTCGGTCCAAGGCGTCAACGTC ATCAAGCAGCTCGGACTTCTTCACGTCGGAGACGAATTCCAGAGCCTTCAGTTCCGGCCCGACGTCATGTTCCGC CGCAAGCGCGACGCCCTCGCCCGCCAGGTCGACGTCCCTACCGAGCTGTCGGACTTTGTCGACTGGTCCACGCTC TTACAACGCCAGGAGAAGTTTGCCGGCACGGGCATGGCGCTGACGCTGGCGGGCGCCTTCGTGCCGCGCATCATG GGCATGAGCAACTGGATGGATCAGGCGCTGACGGCGACGCGCCTCCTGAGTAACGAGAACCTGCAGCGGCTCGTA CTCCCCGGCATCTTCGTGGCTGGTAAGCGTTTTCCTACTTGGCATACACAGACGGGCTCAGAGGCTGACATGAGA GAATAGCCGTGGCCGCGACGGCGTACGTCCTACAGCAGATACCCAATTCGCTTCCGCCGCGGCTGGCGACCAAGA TCTCGACGCAGCTAGCGGAACTCGACTACGTGCACGCCAACTCGACGCGCATCTCGTCGTCCGTCCACAAGGTGC TCCGCTACCCAGCCGAGACGCTGCGTGTCGGCCTCGACCAGAGCGTAAAGGACCTCGGCAACCGGCTCGACGAGA CGGTCAAGGTCAAGGGCGAGAGCGAGCGGGCTGCCAAGTTCTTCCGTGACCTCGTCGGTGAGAGCCAGGTGCAGC GCAGTATGGTCGAGGCCGTGGATCTGGATGCCCCGCCGCCAGGCCTGCGCTGA |