Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|704
Gene name
Locationscaffold_1191:297..1542
Strand-
Gene length (bp)1245
Transcript length (bp)1080
Coding sequence length (bp)1077
Protein length (aa) 359

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01370 Epimerase NAD dependent epimerase/dehydratase family 1.8E-07 8 134

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|704
MADAKPSVLIIGGLGYIGRFLALHIHQNKLASDVRLVDKVLPQLAWLAPEFSEPCSRDKFMQADASRPEALARIF
DRPDGKQWDYVFNCGGETRYSQDDQVYKLRSLGLSLAVGKEAAKRQVKAFVELSTGMVYKIAVFKLQAEEQLSQM
PGLNLIIARLPHVYGPYAAQWVATALCMARVYQHLDDEMSWLWSGDLRTNTVHVCDAVRALWDMASWYAAGKAGW
DSAEMGPIPIFNVVDKGETTQRTMADIIGDIFKIETGFQGQIISTFAKLNLDRVVDDVNDETLGPWAELLHEASI
TRPGPLTPFMEKELLKDTDLSMDGSRLEKLLGFKYEKPKMTKQLIEEVIESYRRMKWWP
Coding >Ophio5|704
ATGGCCGACGCCAAACCGTCCGTTCTCATCATCGGCGGCCTGGGCTATATCGGTCGCTTCCTCGCCCTCCACATC
CATCAGAACAAGCTGGCTTCGGACGTTCGATTGGTCGACAAGGTGCTGCCCCAGCTCGCCTGGCTAGCCCCCGAG
TTCTCCGAGCCGTGCTCGCGGGACAAGTTCATGCAGGCCGATGCCAGCAGACCTGAGGCCCTGGCCAGGATATTC
GACCGCCCCGACGGCAAACAGTGGGACTACGTCTTCAACTGCGGCGGCGAGACGCGATACTCGCAAGACGACCAA
GTCTACAAGCTGCGGTCCCTGGGCCTCTCCCTGGCCGTCGGCAAGGAGGCCGCCAAGCGCCAGGTCAAGGCCTTT
GTGGAGCTGAGCACCGGCATGGTCTACAAGATTGCCGTCTTTAAGCTGCAAGCCGAGGAGCAACTATCTCAGATG
CCAGGGCTCAATCTCATCATCGCACGCCTGCCGCACGTCTACGGTCCATACGCGGCCCAATGGGTCGCCACGGCG
CTGTGCATGGCTCGCGTCTACCAGCATCTCGACGACGAGATGAGCTGGCTCTGGTCAGGGGACCTGCGCACTAAT
ACTGTACATGTTTGCGACGCCGTCCGCGCCTTGTGGGACATGGCCTCCTGGTACGCTGCCGGCAAGGCCGGATGG
GACAGCGCCGAGATGGGCCCCATTCCCATTTTCAACGTGGTGGATAAGGGCGAAACGACGCAGCGGACCATGGCC
GACATCATCGGTGACATTTTCAAGATCGAGACGGGCTTCCAGGGCCAGATCATCAGCACCTTTGCCAAGCTGAAC
CTGGACCGAGTCGTCGACGACGTCAATGACGAGACGCTGGGGCCCTGGGCCGAACTGCTACACGAGGCTTCCATC
ACGCGGCCAGGGCCGCTGACACCCTTTATGGAAAAGGAGCTGCTCAAGGACACGGATCTAAGCATGGACGGCAGC
CGGCTGGAGAAGCTGCTGGGCTTCAAGTACGAGAAGCCCAAGATGACGAAGCAGCTAATCGAAGAGGTGATTGAA
AGCTATAGAAGGATGAAGTGGTGGCCC
Transcript >Ophio5|704
ATGGCCGACGCCAAACCGTCCGTTCTCATCATCGGCGGCCTGGGCTATATCGGTCGCTTCCTCGCCCTCCACATC
CATCAGAACAAGCTGGCTTCGGACGTTCGATTGGTCGACAAGGTGCTGCCCCAGCTCGCCTGGCTAGCCCCCGAG
TTCTCCGAGCCGTGCTCGCGGGACAAGTTCATGCAGGCCGATGCCAGCAGACCTGAGGCCCTGGCCAGGATATTC
GACCGCCCCGACGGCAAACAGTGGGACTACGTCTTCAACTGCGGCGGCGAGACGCGATACTCGCAAGACGACCAA
GTCTACAAGCTGCGGTCCCTGGGCCTCTCCCTGGCCGTCGGCAAGGAGGCCGCCAAGCGCCAGGTCAAGGCCTTT
GTGGAGCTGAGCACCGGCATGGTCTACAAGATTGCCGTCTTTAAGCTGCAAGCCGAGGAGCAACTATCTCAGATG
CCAGGGCTCAATCTCATCATCGCACGCCTGCCGCACGTCTACGGTCCATACGCGGCCCAATGGGTCGCCACGGCG
CTGTGCATGGCTCGCGTCTACCAGCATCTCGACGACGAGATGAGCTGGCTCTGGTCAGGGGACCTGCGCACTAAT
ACTGTACATGTTTGCGACGCCGTCCGCGCCTTGTGGGACATGGCCTCCTGGTACGCTGCCGGCAAGGCCGGATGG
GACAGCGCCGAGATGGGCCCCATTCCCATTTTCAACGTGGTGGATAAGGGCGAAACGACGCAGCGGACCATGGCC
GACATCATCGGTGACATTTTCAAGATCGAGACGGGCTTCCAGGGCCAGATCATCAGCACCTTTGCCAAGCTGAAC
CTGGACCGAGTCGTCGACGACGTCAATGACGAGACGCTGGGGCCCTGGGCCGAACTGCTACACGAGGCTTCCATC
ACGCGGCCAGGGCCGCTGACACCCTTTATGGAAAAGGAGCTGCTCAAGGACACGGATCTAAGCATGGACGGCAGC
CGGCTGGAGAAGCTGCTGGGCTTCAAGTACGAGAAGCCCAAGATGACGAAGCAGCTAATCGAAGAGGTGATTGAA
AGCTATAGAAGGATGAAGTGGTGGCCCTGA
Gene >Ophio5|704
ATGGCCGACGCCAAACCGTCCGTTCTCATCATCGGCGGCCTGGGCTATATCGGTCGCTTCCTCGCCCTCCACATC
CATCAGAACAAGCTGGCTTCGGACGTTCGATTGGTCGACAAGGTGCTGCCCCAGCTCGCCTGGCTAGCCCCCGAG
TTCTCCGAGCCGTGCTCGCGGGACAAGTTCATGCAGGCCGATGCCAGCAGACCTGGTCGGTGGCGACCCATTCCC
CCCCTATCTTTGTCTTCGTCCGCTGACTGCCCTGGATCGCAGAGGCCCTGGCCAGGATATTCGACCGCCCCGACG
GCAAACAGTGGGACTACGTCTTCAACTGCGGCGGCGAGACGCGATACTCGCAAGACGACCAAGTCTACAAGCTGC
GGTCCCTGGGCCTCTCCCTGGCCGTCGGCAAGGAGGCCGCCAAGCGCCAGGTCAAGGCCTTTGTGGAGCTGAGCA
CCGGCATGGTCTACAAGTCCGACTCGTCTCCCAGCAAGGAGAAGGACAAGCTCAAGCCGTGGAGCAGGATTGCCG
TCTTTAAGCTGCAAGCCGAGGAGCAACTATCTCAGATGCCAGGGTAGGCTACGACGCCATGGAGACGGCCGGGCT
CGTGCTTACTCTCCGAATAGGCTCAATCTCATCATCGCACGCCTGCCGCACGTCTACGGTCCATACGCGGCCCAA
TGGGTCGCCACGGCGCTGTGCATGGCTCGCGTCTACCAGCATCTCGACGACGAGATGAGCTGGCTCTGGTCAGGG
GACCTGCGCACTAATACTGTACATGTTTGCGACGCCGTCCGCGCCTTGTGGGACATGGCCTCCTGGTACGCTGCC
GGCAAGGCCGGATGGGACAGCGCCGAGATGGGCCCCATTCCCATTTTCAACGTGGTGGATAAGGGCGAAACGACG
CAGCGGACCATGGCCGACATCATCGGTGACATTTTCAAGATCGAGACGGGCTTCCAGGGCCAGATCATCAGCACC
TTTGCCAAGCTGAACCTGGACCGAGTCGTCGACGACGTCAATGACGAGACGCTGGGGCCCTGGGCCGAACTGCTA
CACGAGGCTTCCATCACGCGGCCAGGGCCGCTGACACCCTTTATGGAAAAGGAGCTGCTCAAGGACACGGATCTA
AGCATGGACGGCAGCCGGCTGGAGAAGCTGCTGGGCTTCAAGTACGAGAAGCCCAAGATGACGAAGCAGCTAATC
GAAGAGGTGATTGAAAGCTATAGAAGGATGAAGTGGTGGCCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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