Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7029
Gene name
Locationscaffold_65:22838..23724
Strand+
Gene length (bp)886
Transcript length (bp)714
Coding sequence length (bp)711
Protein length (aa) 237

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03227 GILT Gamma interferon inducible lysosomal thiol reductase (GILT) 4.9E-18 52 149

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor Yes
GO:0016491 oxidoreductase activity No
GO:0003824 catalytic activity No
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.5

Transmembrane Domains

Domain # Start End Length
1 7 26 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7029
MPPRPRPVVRVLLLSVFVVIVVVSALSRRPPAWSRRFGTNFAAVRSNLVPLEAHIISKCPDTRDAMRELILPVMQ
QVSDKVDFKLNYIGTPVGDDGIKCKHGPDECMGNILELCARELYPSAMTNLGFIYCLTKQYRDIPKRALVEDCAL
EHRVDVRALNECATRDDGAHGLQLLRESVQHTADANVTISCTIRLNNEIYCIRDGGKWKQCPQGPGVSDLVATIE
KLHGSSSSSSSS
Coding >Ophio5|7029
ATGCCTCCGCGTCCTCGACCCGTCGTCCGCGTGCTACTACTCTCCGTCTTTGTCGTCATCGTCGTCGTCTCGGCC
TTGTCCCGCCGCCCGCCGGCTTGGTCCCGCCGCTTCGGTACGAACTTCGCGGCAGTGAGGTCGAACCTGGTGCCG
CTCGAGGCACACATCATTAGCAAATGTCCCGACACCAGGGACGCCATGCGGGAGCTCATTCTTCCCGTCATGCAG
CAAGTGTCCGACAAGGTTGACTTTAAACTCAACTACATCGGAACTCCTGTCGGCGACGACGGCATCAAATGCAAA
CACGGCCCCGATGAGTGCATGGGCAACATTCTCGAACTCTGCGCCCGCGAGCTTTATCCTAGTGCTATGACCAAT
CTCGGTTTCATCTATTGCCTGACGAAGCAGTATCGCGACATACCCAAGCGAGCCCTGGTGGAAGACTGCGCTCTG
GAACACCGCGTGGACGTTCGGGCTCTGAACGAGTGCGCAACGCGCGACGACGGCGCTCACGGACTCCAACTCCTG
CGAGAGAGCGTCCAGCACACGGCCGACGCCAACGTCACCATCAGCTGCACGATTCGGCTCAACAACGAAATCTAC
TGCATCCGCGACGGCGGCAAATGGAAACAGTGCCCCCAAGGCCCCGGCGTGTCAGACCTCGTGGCCACTATCGAG
AAGCTTCATGGGTCGTCGTCGTCGTCGTCATCGTCC
Transcript >Ophio5|7029
ATGCCTCCGCGTCCTCGACCCGTCGTCCGCGTGCTACTACTCTCCGTCTTTGTCGTCATCGTCGTCGTCTCGGCC
TTGTCCCGCCGCCCGCCGGCTTGGTCCCGCCGCTTCGGTACGAACTTCGCGGCAGTGAGGTCGAACCTGGTGCCG
CTCGAGGCACACATCATTAGCAAATGTCCCGACACCAGGGACGCCATGCGGGAGCTCATTCTTCCCGTCATGCAG
CAAGTGTCCGACAAGGTTGACTTTAAACTCAACTACATCGGAACTCCTGTCGGCGACGACGGCATCAAATGCAAA
CACGGCCCCGATGAGTGCATGGGCAACATTCTCGAACTCTGCGCCCGCGAGCTTTATCCTAGTGCTATGACCAAT
CTCGGTTTCATCTATTGCCTGACGAAGCAGTATCGCGACATACCCAAGCGAGCCCTGGTGGAAGACTGCGCTCTG
GAACACCGCGTGGACGTTCGGGCTCTGAACGAGTGCGCAACGCGCGACGACGGCGCTCACGGACTCCAACTCCTG
CGAGAGAGCGTCCAGCACACGGCCGACGCCAACGTCACCATCAGCTGCACGATTCGGCTCAACAACGAAATCTAC
TGCATCCGCGACGGCGGCAAATGGAAACAGTGCCCCCAAGGCCCCGGCGTGTCAGACCTCGTGGCCACTATCGAG
AAGCTTCATGGGTCGTCGTCGTCGTCGTCATCGTCCTGA
Gene >Ophio5|7029
ATGCCTCCGCGTCCTCGACCCGTCGTCCGCGTGCTACTACTCTCCGTCTTTGTCGTCATCGTCGTCGTCTCGGCC
TTGTCCCGCCGCCCGCCGGCTTGGTCCCGCCGCTTCGGTACGAACTTCGCGGCAGTGAGGTCGAACCTGGTGCCG
CTCGAGGCACACATCATTAGCAAATGTCCCGACACCAGGGTACGGACCGCATCCACGATGCGCATCTCTACCTAC
AATGCTTACCCGGGGTCTCGCAGGACGCCATGCGGGAGCTCATTCTTCCCGTCATGCAGCAAGTGTCCGACAAGG
TTGACTTTAAACTCAACTACATCGGAACGTGAGCATCGCCTCCTATCCTCCCGTCCCCTCCCCCTTGTTGACGGC
GACGTCCGCCAGTCCTGTCGGCGACGACGGCATCAAATGCAAACACGGCCCCGATGAGTGCATGGGCAACATTCT
CGAACTCTGCGCCCGCGAGCTTTATCCTAGTGCTATGACCAATCTCGGTTTCATCTATTGCCTGACGAAGCAGTA
TCGCGACATACCCAAGCGAGCCCTGGTGGAAGACTGCGCTCTGGAACACCGCGTGGACGTTCGGGCTCTGAACGA
GTGCGCAACGCGCGACGACGGCGCTCACGGACTCCAACTCCTGCGAGAGAGCGTCCAGCACACGGCCGACGTGAG
TTGGGGACGGCATCTCGCGGATGAGGCTGGTGACTGACGAGAGCAATAGGCCAACGTCACCATCAGCTGCACGAT
TCGGCTCAACAACGAAATCTACTGCATCCGCGACGGCGGCAAATGGAAACAGTGCCCCCAAGGCCCCGGCGTGTC
AGACCTCGTGGCCACTATCGAGAAGCTTCATGGGTCGTCGTCGTCGTCGTCATCGTCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail