Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7020
Gene name
Locationscaffold_65:916..3223
Strand-
Gene length (bp)2307
Transcript length (bp)2061
Coding sequence length (bp)2061
Protein length (aa) 687

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 8.4E-11 38 73

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P28348|NIRA_EMENI Nitrogen assimilation transcription factor nirA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nirA PE=3 SV=1 28 566 8.0E-16
sp|P28349|NIT4_NEUCR Nitrogen assimilation transcription factor nit-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nit-4 PE=3 SV=2 29 560 3.0E-15
sp|Q9HDX1|YKN4_SCHPO Uncharacterized transcriptional regulatory protein PB1A11.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB1A11.04c PE=3 SV=1 27 94 4.0E-07
sp|P10563|QUTA_EMENI Quinic acid utilization activator OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=qutA PE=3 SV=2 28 92 6.0E-07

GO

GO Term Description Terminal node
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008150 biological_process No
GO:0051252 regulation of RNA metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0019222 regulation of metabolic process No
GO:0050794 regulation of cellular process No
GO:0140110 transcription regulator activity No
GO:0031323 regulation of cellular metabolic process No
GO:0065007 biological regulation No
GO:0046872 metal ion binding No
GO:0010468 regulation of gene expression No
GO:0043167 ion binding No
GO:0043169 cation binding No
GO:0003674 molecular_function No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0005488 binding No
GO:0080090 regulation of primary metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0050789 regulation of biological process No
GO:0003700 DNA-binding transcription factor activity No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:2001141 regulation of RNA biosynthetic process No
GO:0046914 transition metal ion binding No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0031326 regulation of cellular biosynthetic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.4076 0.8722 0.1189 0.0133 0.0534 0.0025 0.033 0.048 0.0417 0.09

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 27.73 14.71 40.74
CcL In ants, during behavior modification 8.09 3.20 12.98
CcD In ants, recently dead 7.45 2.84 12.06

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.000286 yes
SC16a CcD 0.000286 yes
CcL CcD 0.826605 no

Orthologs

Orthofinder run ID4
Orthogroup110
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1131
Ophiocordyceps australis 1348a (Ghana) OphauG2|1722
Ophiocordyceps australis 1348a (Ghana) OphauG2|2750
Ophiocordyceps australis 1348a (Ghana) OphauG2|526
Ophiocordyceps australis 1348a (Ghana) OphauG2|7709
Ophiocordyceps australis map64 (Brazil) OphauB2|1288
Ophiocordyceps australis map64 (Brazil) OphauB2|556
Ophiocordyceps camponoti-floridani Ophcf2|06622
Ophiocordyceps camponoti-rufipedis Ophun1|7419
Ophiocordyceps kimflemingae Ophio5|7020 (this protein)
Ophiocordyceps kimflemingae Ophio5|8604
Ophiocordyceps subramaniannii Hirsu2|1733
Ophiocordyceps subramaniannii Hirsu2|902
Ophiocordyceps subramaniannii Hirsu2|903
Ophiocordyceps subramaniannii Hirsu2|904

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7020
MRKYPSLRPYDRGDAPEPERQALQTLLPKRRRIGVSVACDSCRQKKIRCDGQRPNCSACESKDAECSYRDLSRLS
PESRSLLLEVIHLLNGLPQEEQSSVVRILKNEDDASVILSTLRGGMDSKERPSDHATAMAIMDSSFQAIELESQN
PNAYLFLPPLHAETLQGASYRRLITSGATLGAASPQRSEYGVAGSTITCDDRLHFLNIRHWTPVPIPNGVAARAI
SLYLETDHPLLGNFDPDLFLADLTSAKTDYCSSVLVNALLYWACQMYSALDTTVDDLALCFCTEAERLWDTEKNN
DSVLNLAAAQLLSMGYLGQGRNHVVLSYLRQASDMAVRMGLFGGDEDDRAAARMQKLTSEAVSAHLHAAWGTFNW
ITLMSLFYRQPGMHCSYHPPCVPIPGEESMDTAPSSPASTQASQRDNMKSLFPHLCRFWRIMHEVSLAYEEQKHP
PGFKGTLAFAEFKFRELLAWSNRLPRHLSRDDQHPHYVQVLHLWFHTAILDIFRPWIDGSPGQSRLRTFTSIVSS
PIVVYAASINQLKQLIVNYRLNFVASTYTILWHSALIYLSNAILQLPREENWLFYFLVCVYSYERLRRPWRVTRA
IGTALLSLAMRNGSLSSDRARAILRDLDRDDFTGIHVLGKIRATFMSDLDMARCDPGQATVEKQAGEFEQYALLE
EFTNEFGDEDA*
Coding >Ophio5|7020
ATGAGGAAATACCCGTCTCTCCGTCCTTATGACCGCGGCGATGCCCCTGAGCCGGAACGCCAGGCTTTGCAGACA
TTGCTGCCGAAGCGGCGTCGCATCGGCGTGTCAGTGGCCTGTGACTCGTGCCGACAAAAGAAGATCCGGTGTGAC
GGCCAGCGCCCAAACTGCTCCGCCTGCGAGAGCAAGGACGCTGAGTGTTCGTACCGAGATTTGAGTCGGCTGAGC
CCAGAGTCGCGGAGCCTGCTGCTGGAAGTCATACATCTCCTCAATGGGCTCCCGCAGGAAGAGCAGTCTTCCGTC
GTCAGGATTCTCAAGAATGAAGACGACGCGTCCGTCATCCTTTCCACCCTGAGAGGCGGCATGGACAGCAAGGAA
CGGCCGTCGGATCATGCGACGGCTATGGCCATCATGGACAGCTCCTTTCAGGCCATCGAGCTCGAGTCCCAGAAC
CCGAATGCCTATCTCTTCCTGCCGCCTCTTCATGCTGAGACGCTGCAAGGGGCGTCCTACCGACGCCTCATCACG
TCCGGAGCAACTTTGGGCGCGGCTTCGCCCCAGCGTAGCGAGTATGGTGTTGCGGGCTCGACCATCACATGCGAT
GACCGGCTTCATTTCTTGAACATTCGTCATTGGACTCCTGTCCCGATACCGAACGGGGTGGCTGCCCGGGCCATT
TCCCTCTATCTGGAGACTGACCATCCTCTGCTCGGCAACTTCGACCCCGACCTCTTCCTAGCGGACCTGACGAGC
GCTAAAACCGACTACTGTTCCTCGGTCCTCGTCAATGCCCTGCTGTACTGGGCGTGTCAAATGTATAGCGCCCTG
GACACCACCGTCGACGACCTTGCGCTGTGCTTCTGCACCGAGGCTGAGCGCCTCTGGGATACGGAAAAGAACAAC
GACTCGGTCCTCAACCTGGCTGCTGCACAGCTCCTGAGCATGGGCTACCTGGGTCAGGGCAGAAACCACGTGGTG
CTGTCGTACCTCAGGCAGGCTTCGGACATGGCTGTGCGGATGGGCCTGTTTGGCGGCGATGAAGATGACCGGGCC
GCAGCGAGGATGCAAAAGTTGACGAGCGAAGCTGTCAGTGCCCATCTTCACGCCGCCTGGGGAACCTTTAACTGG
ATAACCCTCATGTCACTCTTCTACCGCCAGCCGGGCATGCACTGCTCTTACCACCCGCCCTGCGTACCGATTCCC
GGGGAGGAGTCGATGGATACGGCCCCGAGCTCGCCCGCCTCGACTCAAGCGTCGCAGAGGGACAACATGAAGAGC
CTATTTCCTCACCTCTGTCGGTTCTGGCGGATCATGCACGAGGTGAGCTTGGCTTACGAGGAGCAGAAGCATCCG
CCGGGATTCAAGGGAACGCTTGCCTTTGCCGAGTTCAAGTTCCGCGAGCTGCTTGCGTGGAGCAACAGGTTGCCG
CGGCACCTGTCGAGGGACGACCAGCACCCGCATTACGTCCAGGTGTTGCACCTCTGGTTCCATACCGCAATTCTC
GACATCTTCAGGCCGTGGATCGACGGCTCGCCGGGTCAGAGTCGACTACGAACCTTTACCAGCATCGTCAGCTCG
CCGATCGTCGTCTACGCCGCTTCGATAAACCAGCTGAAGCAACTCATCGTCAACTACAGGCTCAACTTTGTCGCC
TCGACCTACACCATACTCTGGCACTCGGCGCTCATCTACCTCAGCAACGCGATCCTGCAGCTGCCCAGGGAGGAA
AACTGGCTGTTTTACTTTCTGGTGTGCGTATACAGCTACGAACGACTCCGGCGGCCGTGGCGCGTGACGCGGGCC
ATCGGCACCGCCCTCCTTTCCCTGGCCATGCGCAACGGCAGCCTGTCGAGTGATAGAGCGAGAGCGATCCTGAGA
GACCTGGATCGTGACGACTTTACTGGCATCCACGTGCTGGGCAAGATCAGGGCTACCTTTATGTCTGACTTGGAT
ATGGCGAGGTGTGATCCGGGCCAGGCGACGGTGGAAAAGCAGGCTGGAGAATTTGAGCAGTATGCTCTGCTGGAG
GAGTTTACGAATGAGTTTGGAGATGAGGATGCTTGA
Transcript >Ophio5|7020
ATGAGGAAATACCCGTCTCTCCGTCCTTATGACCGCGGCGATGCCCCTGAGCCGGAACGCCAGGCTTTGCAGACA
TTGCTGCCGAAGCGGCGTCGCATCGGCGTGTCAGTGGCCTGTGACTCGTGCCGACAAAAGAAGATCCGGTGTGAC
GGCCAGCGCCCAAACTGCTCCGCCTGCGAGAGCAAGGACGCTGAGTGTTCGTACCGAGATTTGAGTCGGCTGAGC
CCAGAGTCGCGGAGCCTGCTGCTGGAAGTCATACATCTCCTCAATGGGCTCCCGCAGGAAGAGCAGTCTTCCGTC
GTCAGGATTCTCAAGAATGAAGACGACGCGTCCGTCATCCTTTCCACCCTGAGAGGCGGCATGGACAGCAAGGAA
CGGCCGTCGGATCATGCGACGGCTATGGCCATCATGGACAGCTCCTTTCAGGCCATCGAGCTCGAGTCCCAGAAC
CCGAATGCCTATCTCTTCCTGCCGCCTCTTCATGCTGAGACGCTGCAAGGGGCGTCCTACCGACGCCTCATCACG
TCCGGAGCAACTTTGGGCGCGGCTTCGCCCCAGCGTAGCGAGTATGGTGTTGCGGGCTCGACCATCACATGCGAT
GACCGGCTTCATTTCTTGAACATTCGTCATTGGACTCCTGTCCCGATACCGAACGGGGTGGCTGCCCGGGCCATT
TCCCTCTATCTGGAGACTGACCATCCTCTGCTCGGCAACTTCGACCCCGACCTCTTCCTAGCGGACCTGACGAGC
GCTAAAACCGACTACTGTTCCTCGGTCCTCGTCAATGCCCTGCTGTACTGGGCGTGTCAAATGTATAGCGCCCTG
GACACCACCGTCGACGACCTTGCGCTGTGCTTCTGCACCGAGGCTGAGCGCCTCTGGGATACGGAAAAGAACAAC
GACTCGGTCCTCAACCTGGCTGCTGCACAGCTCCTGAGCATGGGCTACCTGGGTCAGGGCAGAAACCACGTGGTG
CTGTCGTACCTCAGGCAGGCTTCGGACATGGCTGTGCGGATGGGCCTGTTTGGCGGCGATGAAGATGACCGGGCC
GCAGCGAGGATGCAAAAGTTGACGAGCGAAGCTGTCAGTGCCCATCTTCACGCCGCCTGGGGAACCTTTAACTGG
ATAACCCTCATGTCACTCTTCTACCGCCAGCCGGGCATGCACTGCTCTTACCACCCGCCCTGCGTACCGATTCCC
GGGGAGGAGTCGATGGATACGGCCCCGAGCTCGCCCGCCTCGACTCAAGCGTCGCAGAGGGACAACATGAAGAGC
CTATTTCCTCACCTCTGTCGGTTCTGGCGGATCATGCACGAGGTGAGCTTGGCTTACGAGGAGCAGAAGCATCCG
CCGGGATTCAAGGGAACGCTTGCCTTTGCCGAGTTCAAGTTCCGCGAGCTGCTTGCGTGGAGCAACAGGTTGCCG
CGGCACCTGTCGAGGGACGACCAGCACCCGCATTACGTCCAGGTGTTGCACCTCTGGTTCCATACCGCAATTCTC
GACATCTTCAGGCCGTGGATCGACGGCTCGCCGGGTCAGAGTCGACTACGAACCTTTACCAGCATCGTCAGCTCG
CCGATCGTCGTCTACGCCGCTTCGATAAACCAGCTGAAGCAACTCATCGTCAACTACAGGCTCAACTTTGTCGCC
TCGACCTACACCATACTCTGGCACTCGGCGCTCATCTACCTCAGCAACGCGATCCTGCAGCTGCCCAGGGAGGAA
AACTGGCTGTTTTACTTTCTGGTGTGCGTATACAGCTACGAACGACTCCGGCGGCCGTGGCGCGTGACGCGGGCC
ATCGGCACCGCCCTCCTTTCCCTGGCCATGCGCAACGGCAGCCTGTCGAGTGATAGAGCGAGAGCGATCCTGAGA
GACCTGGATCGTGACGACTTTACTGGCATCCACGTGCTGGGCAAGATCAGGGCTACCTTTATGTCTGACTTGGAT
ATGGCGAGGTGTGATCCGGGCCAGGCGACGGTGGAAAAGCAGGCTGGAGAATTTGAGCAGTATGCTCTGCTGGAG
GAGTTTACGAATGAGTTTGGAGATGAGGATGCTTGA
Gene >Ophio5|7020
ATGAGGAAATACCCGTCTCTCCGTCCTTATGACCGCGGCGATGCCCCTGAGCCGGAACGCCAGGCTTTGCAGACA
TTGCTGCCGAAGCGGCGTCGCATCGGCGTGTCAGTGGCCTGTGACTCGTGCCGACAAAAGAAGATCCGGGTAGGT
GATGGATGCCACGTCTCGGTTGCCGTTGTCTGATGGGATAGGATCGATGCAGTGTGACGGCCAGCGCCCAAACTG
CTCCGCCTGCGAGAGCAAGGACGCTGAGTGTTCGTACCGAGATTTGAGTCGGCTGAGCCCAGAGTCGCGGAGCCT
GCTGCTGGAAGTCATACATCTCCTCAATGGGCTCCCGCAGGAAGAGCAGTCTTCCGTCGTCAGGATTCTCAAGAA
TGAAGACGACGCGTCCGTCATCCTTTCCACCCTGAGAGGCGGCATGGACAGCAAGGAACGGCCGTCGGATCATGC
GACGGCTATGGCCATCATGGACAGCTCCTTTCAGGCCATCGAGCTCGAGTCCCAGAACCCGAATGCCTATCTCTT
CCTGCCGCCTCTTCATGCTGAGACGCTGCAAGGGGCGTCCTACCGACGCCTCATCACGTCCGGAGCAACTTTGGG
CGCGGCTTCGCCCCAGCGTAGCGAGTATGGTGTTGCGGGCTCGACCATCACATGCGATGACCGGCTTCATTTCTT
GAACATTCGTCATTGGACTCCTGTCCCGATACCGAACGGGGTGGCTGCCCGGGCCATTTCCCTCTATCTGGAGAC
TGACCATCCTCTGCTCGGCAACTTCGACCCCGACCTCTTCCTAGCGGACCTGACGAGCGCTAAAACCGACTACTG
TTCCTCGGTCCTCGTCAATGCCCTGCTGTACTGGGCGTGTGTAAGATCCGAGCGAGTACGGAGAGAATCGTCGGC
CACTGACAGCATCAACAACAGCAAATGTATAGCGCCCTGGACACCACCGTCGACGACCTTGCGCTGTGCTTCTGC
ACCGAGGCTGAGCGCCTCTGGGATACGGAAAAGAACAACGACTCGGTCCTCAACCTGGCTGCTGCACAGCTCCTG
AGCATGGGCTACCTGGGTCAGGGCAGAAACCACGTGGTGCTGTCGTACCTCAGGCAGGCTTCGGACATGGCTGTG
CGGATGGGCCTGTTTGGCGGCGATGAAGATGACCGGGCCGCAGCGAGGATGCAAAAGTTGACGAGCGAAGCTGTC
AGTGCCCATCTTCACGCCGCCTGGGGAACCTTTAACTGGATAACGTAGGCTGTGCCCCCTTCCCATCCCGACAGC
TAAGCTGCTCTCGATGACTTACAACGAAACCTTTCAGCCTCATGTCACTCTTCTACCGCCAGCCGGGCATGCACT
GCTCTTACCACCCGCCCTGCGTACCGATTCCCGGGGAGGAGTCGATGGATACGGCCCCGAGCTCGCCCGCCTCGA
CTCAAGCGTCGCAGAGGGACAACATGAAGAGCCTATTTCCTCACCTCTGTCGGTTCTGGCGGATCATGCACGAGG
TGAGCTTGGCTTACGAGGAGCAGAAGCATCCGCCGGGATTCAAGGGAACGCTTGCCTTTGCCGAGTTCAAGTTCC
GCGAGCTGCTTGCGTGGAGCAACAGGTTGCCGCGGCACCTGTCGAGGGACGACCAGCACCCGCATTACGTCCAGG
TGTTGCAGTGAGTGGCTGGCATCGGAAGCAAACCAACTTGAGCACTAACACACCTGCTTCTAACCCAATAGCCTC
TGGTTCCATACCGCAATTCTCGACATCTTCAGGCCGTGGATCGACGGCTCGCCGGGTCAGAGTCGACTACGAACC
TTTACCAGCATCGTCAGCTCGCCGATCGTCGTCTACGCCGCTTCGATAAACCAGCTGAAGCAACTCATCGTCAAC
TACAGGCTCAACTTTGTCGCCTCGACCTACACCATACTCTGGCACTCGGCGCTCATCTACCTCAGCAACGCGATC
CTGCAGCTGCCCAGGGAGGAAAACTGGCTGTTTTACTTTCTGGTGTGCGTATACAGCTACGAACGACTCCGGCGG
CCGTGGCGCGTGACGCGGGCCATCGGCACCGCCCTCCTTTCCCTGGCCATGCGCAACGGCAGCCTGTCGAGTGAT
AGAGCGAGAGCGATCCTGAGAGACCTGGATCGTGACGACTTTACTGGCATCCACGTGCTGGGCAAGATCAGGGCT
ACCTTTATGTCTGACTTGGATATGGCGAGGTGTGATCCGGGCCAGGCGACGGTGGAAAAGCAGGCTGGAGAATTT
GAGCAGTATGCTCTGCTGGAGGAGTTTACGAATGAGTTTGGAGATGAGGATGCTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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