Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7020
Gene name
Locationscaffold_65:916..3223
Strand-
Gene length (bp)2307
Transcript length (bp)2061
Coding sequence length (bp)2061
Protein length (aa) 687

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 8.4E-11 38 73

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P28348|NIRA_EMENI Nitrogen assimilation transcription factor nirA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nirA PE=3 SV=1 28 566 8.0E-16
sp|P28349|NIT4_NEUCR Nitrogen assimilation transcription factor nit-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nit-4 PE=3 SV=2 29 560 3.0E-15
sp|Q9HDX1|YKN4_SCHPO Uncharacterized transcriptional regulatory protein PB1A11.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB1A11.04c PE=3 SV=1 27 94 4.0E-07
sp|P10563|QUTA_EMENI Quinic acid utilization activator OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=qutA PE=3 SV=2 28 92 6.0E-07

GO

GO Term Description Terminal node
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008150 biological_process No
GO:0051252 regulation of RNA metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0019222 regulation of metabolic process No
GO:0050794 regulation of cellular process No
GO:0140110 transcription regulator activity No
GO:0031323 regulation of cellular metabolic process No
GO:0065007 biological regulation No
GO:0046872 metal ion binding No
GO:0010468 regulation of gene expression No
GO:0043167 ion binding No
GO:0043169 cation binding No
GO:0003674 molecular_function No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0005488 binding No
GO:0080090 regulation of primary metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0050789 regulation of biological process No
GO:0003700 DNA-binding transcription factor activity No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:2001141 regulation of RNA biosynthetic process No
GO:0046914 transition metal ion binding No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0031326 regulation of cellular biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7020
MRKYPSLRPYDRGDAPEPERQALQTLLPKRRRIGVSVACDSCRQKKIRCDGQRPNCSACESKDAECSYRDLSRLS
PESRSLLLEVIHLLNGLPQEEQSSVVRILKNEDDASVILSTLRGGMDSKERPSDHATAMAIMDSSFQAIELESQN
PNAYLFLPPLHAETLQGASYRRLITSGATLGAASPQRSEYGVAGSTITCDDRLHFLNIRHWTPVPIPNGVAARAI
SLYLETDHPLLGNFDPDLFLADLTSAKTDYCSSVLVNALLYWACQMYSALDTTVDDLALCFCTEAERLWDTEKNN
DSVLNLAAAQLLSMGYLGQGRNHVVLSYLRQASDMAVRMGLFGGDEDDRAAARMQKLTSEAVSAHLHAAWGTFNW
ITLMSLFYRQPGMHCSYHPPCVPIPGEESMDTAPSSPASTQASQRDNMKSLFPHLCRFWRIMHEVSLAYEEQKHP
PGFKGTLAFAEFKFRELLAWSNRLPRHLSRDDQHPHYVQVLHLWFHTAILDIFRPWIDGSPGQSRLRTFTSIVSS
PIVVYAASINQLKQLIVNYRLNFVASTYTILWHSALIYLSNAILQLPREENWLFYFLVCVYSYERLRRPWRVTRA
IGTALLSLAMRNGSLSSDRARAILRDLDRDDFTGIHVLGKIRATFMSDLDMARCDPGQATVEKQAGEFEQYALLE
EFTNEFGDEDA*
Coding >Ophio5|7020
ATGAGGAAATACCCGTCTCTCCGTCCTTATGACCGCGGCGATGCCCCTGAGCCGGAACGCCAGGCTTTGCAGACA
TTGCTGCCGAAGCGGCGTCGCATCGGCGTGTCAGTGGCCTGTGACTCGTGCCGACAAAAGAAGATCCGGTGTGAC
GGCCAGCGCCCAAACTGCTCCGCCTGCGAGAGCAAGGACGCTGAGTGTTCGTACCGAGATTTGAGTCGGCTGAGC
CCAGAGTCGCGGAGCCTGCTGCTGGAAGTCATACATCTCCTCAATGGGCTCCCGCAGGAAGAGCAGTCTTCCGTC
GTCAGGATTCTCAAGAATGAAGACGACGCGTCCGTCATCCTTTCCACCCTGAGAGGCGGCATGGACAGCAAGGAA
CGGCCGTCGGATCATGCGACGGCTATGGCCATCATGGACAGCTCCTTTCAGGCCATCGAGCTCGAGTCCCAGAAC
CCGAATGCCTATCTCTTCCTGCCGCCTCTTCATGCTGAGACGCTGCAAGGGGCGTCCTACCGACGCCTCATCACG
TCCGGAGCAACTTTGGGCGCGGCTTCGCCCCAGCGTAGCGAGTATGGTGTTGCGGGCTCGACCATCACATGCGAT
GACCGGCTTCATTTCTTGAACATTCGTCATTGGACTCCTGTCCCGATACCGAACGGGGTGGCTGCCCGGGCCATT
TCCCTCTATCTGGAGACTGACCATCCTCTGCTCGGCAACTTCGACCCCGACCTCTTCCTAGCGGACCTGACGAGC
GCTAAAACCGACTACTGTTCCTCGGTCCTCGTCAATGCCCTGCTGTACTGGGCGTGTCAAATGTATAGCGCCCTG
GACACCACCGTCGACGACCTTGCGCTGTGCTTCTGCACCGAGGCTGAGCGCCTCTGGGATACGGAAAAGAACAAC
GACTCGGTCCTCAACCTGGCTGCTGCACAGCTCCTGAGCATGGGCTACCTGGGTCAGGGCAGAAACCACGTGGTG
CTGTCGTACCTCAGGCAGGCTTCGGACATGGCTGTGCGGATGGGCCTGTTTGGCGGCGATGAAGATGACCGGGCC
GCAGCGAGGATGCAAAAGTTGACGAGCGAAGCTGTCAGTGCCCATCTTCACGCCGCCTGGGGAACCTTTAACTGG
ATAACCCTCATGTCACTCTTCTACCGCCAGCCGGGCATGCACTGCTCTTACCACCCGCCCTGCGTACCGATTCCC
GGGGAGGAGTCGATGGATACGGCCCCGAGCTCGCCCGCCTCGACTCAAGCGTCGCAGAGGGACAACATGAAGAGC
CTATTTCCTCACCTCTGTCGGTTCTGGCGGATCATGCACGAGGTGAGCTTGGCTTACGAGGAGCAGAAGCATCCG
CCGGGATTCAAGGGAACGCTTGCCTTTGCCGAGTTCAAGTTCCGCGAGCTGCTTGCGTGGAGCAACAGGTTGCCG
CGGCACCTGTCGAGGGACGACCAGCACCCGCATTACGTCCAGGTGTTGCACCTCTGGTTCCATACCGCAATTCTC
GACATCTTCAGGCCGTGGATCGACGGCTCGCCGGGTCAGAGTCGACTACGAACCTTTACCAGCATCGTCAGCTCG
CCGATCGTCGTCTACGCCGCTTCGATAAACCAGCTGAAGCAACTCATCGTCAACTACAGGCTCAACTTTGTCGCC
TCGACCTACACCATACTCTGGCACTCGGCGCTCATCTACCTCAGCAACGCGATCCTGCAGCTGCCCAGGGAGGAA
AACTGGCTGTTTTACTTTCTGGTGTGCGTATACAGCTACGAACGACTCCGGCGGCCGTGGCGCGTGACGCGGGCC
ATCGGCACCGCCCTCCTTTCCCTGGCCATGCGCAACGGCAGCCTGTCGAGTGATAGAGCGAGAGCGATCCTGAGA
GACCTGGATCGTGACGACTTTACTGGCATCCACGTGCTGGGCAAGATCAGGGCTACCTTTATGTCTGACTTGGAT
ATGGCGAGGTGTGATCCGGGCCAGGCGACGGTGGAAAAGCAGGCTGGAGAATTTGAGCAGTATGCTCTGCTGGAG
GAGTTTACGAATGAGTTTGGAGATGAGGATGCTTGA
Transcript >Ophio5|7020
ATGAGGAAATACCCGTCTCTCCGTCCTTATGACCGCGGCGATGCCCCTGAGCCGGAACGCCAGGCTTTGCAGACA
TTGCTGCCGAAGCGGCGTCGCATCGGCGTGTCAGTGGCCTGTGACTCGTGCCGACAAAAGAAGATCCGGTGTGAC
GGCCAGCGCCCAAACTGCTCCGCCTGCGAGAGCAAGGACGCTGAGTGTTCGTACCGAGATTTGAGTCGGCTGAGC
CCAGAGTCGCGGAGCCTGCTGCTGGAAGTCATACATCTCCTCAATGGGCTCCCGCAGGAAGAGCAGTCTTCCGTC
GTCAGGATTCTCAAGAATGAAGACGACGCGTCCGTCATCCTTTCCACCCTGAGAGGCGGCATGGACAGCAAGGAA
CGGCCGTCGGATCATGCGACGGCTATGGCCATCATGGACAGCTCCTTTCAGGCCATCGAGCTCGAGTCCCAGAAC
CCGAATGCCTATCTCTTCCTGCCGCCTCTTCATGCTGAGACGCTGCAAGGGGCGTCCTACCGACGCCTCATCACG
TCCGGAGCAACTTTGGGCGCGGCTTCGCCCCAGCGTAGCGAGTATGGTGTTGCGGGCTCGACCATCACATGCGAT
GACCGGCTTCATTTCTTGAACATTCGTCATTGGACTCCTGTCCCGATACCGAACGGGGTGGCTGCCCGGGCCATT
TCCCTCTATCTGGAGACTGACCATCCTCTGCTCGGCAACTTCGACCCCGACCTCTTCCTAGCGGACCTGACGAGC
GCTAAAACCGACTACTGTTCCTCGGTCCTCGTCAATGCCCTGCTGTACTGGGCGTGTCAAATGTATAGCGCCCTG
GACACCACCGTCGACGACCTTGCGCTGTGCTTCTGCACCGAGGCTGAGCGCCTCTGGGATACGGAAAAGAACAAC
GACTCGGTCCTCAACCTGGCTGCTGCACAGCTCCTGAGCATGGGCTACCTGGGTCAGGGCAGAAACCACGTGGTG
CTGTCGTACCTCAGGCAGGCTTCGGACATGGCTGTGCGGATGGGCCTGTTTGGCGGCGATGAAGATGACCGGGCC
GCAGCGAGGATGCAAAAGTTGACGAGCGAAGCTGTCAGTGCCCATCTTCACGCCGCCTGGGGAACCTTTAACTGG
ATAACCCTCATGTCACTCTTCTACCGCCAGCCGGGCATGCACTGCTCTTACCACCCGCCCTGCGTACCGATTCCC
GGGGAGGAGTCGATGGATACGGCCCCGAGCTCGCCCGCCTCGACTCAAGCGTCGCAGAGGGACAACATGAAGAGC
CTATTTCCTCACCTCTGTCGGTTCTGGCGGATCATGCACGAGGTGAGCTTGGCTTACGAGGAGCAGAAGCATCCG
CCGGGATTCAAGGGAACGCTTGCCTTTGCCGAGTTCAAGTTCCGCGAGCTGCTTGCGTGGAGCAACAGGTTGCCG
CGGCACCTGTCGAGGGACGACCAGCACCCGCATTACGTCCAGGTGTTGCACCTCTGGTTCCATACCGCAATTCTC
GACATCTTCAGGCCGTGGATCGACGGCTCGCCGGGTCAGAGTCGACTACGAACCTTTACCAGCATCGTCAGCTCG
CCGATCGTCGTCTACGCCGCTTCGATAAACCAGCTGAAGCAACTCATCGTCAACTACAGGCTCAACTTTGTCGCC
TCGACCTACACCATACTCTGGCACTCGGCGCTCATCTACCTCAGCAACGCGATCCTGCAGCTGCCCAGGGAGGAA
AACTGGCTGTTTTACTTTCTGGTGTGCGTATACAGCTACGAACGACTCCGGCGGCCGTGGCGCGTGACGCGGGCC
ATCGGCACCGCCCTCCTTTCCCTGGCCATGCGCAACGGCAGCCTGTCGAGTGATAGAGCGAGAGCGATCCTGAGA
GACCTGGATCGTGACGACTTTACTGGCATCCACGTGCTGGGCAAGATCAGGGCTACCTTTATGTCTGACTTGGAT
ATGGCGAGGTGTGATCCGGGCCAGGCGACGGTGGAAAAGCAGGCTGGAGAATTTGAGCAGTATGCTCTGCTGGAG
GAGTTTACGAATGAGTTTGGAGATGAGGATGCTTGA
Gene >Ophio5|7020
ATGAGGAAATACCCGTCTCTCCGTCCTTATGACCGCGGCGATGCCCCTGAGCCGGAACGCCAGGCTTTGCAGACA
TTGCTGCCGAAGCGGCGTCGCATCGGCGTGTCAGTGGCCTGTGACTCGTGCCGACAAAAGAAGATCCGGGTAGGT
GATGGATGCCACGTCTCGGTTGCCGTTGTCTGATGGGATAGGATCGATGCAGTGTGACGGCCAGCGCCCAAACTG
CTCCGCCTGCGAGAGCAAGGACGCTGAGTGTTCGTACCGAGATTTGAGTCGGCTGAGCCCAGAGTCGCGGAGCCT
GCTGCTGGAAGTCATACATCTCCTCAATGGGCTCCCGCAGGAAGAGCAGTCTTCCGTCGTCAGGATTCTCAAGAA
TGAAGACGACGCGTCCGTCATCCTTTCCACCCTGAGAGGCGGCATGGACAGCAAGGAACGGCCGTCGGATCATGC
GACGGCTATGGCCATCATGGACAGCTCCTTTCAGGCCATCGAGCTCGAGTCCCAGAACCCGAATGCCTATCTCTT
CCTGCCGCCTCTTCATGCTGAGACGCTGCAAGGGGCGTCCTACCGACGCCTCATCACGTCCGGAGCAACTTTGGG
CGCGGCTTCGCCCCAGCGTAGCGAGTATGGTGTTGCGGGCTCGACCATCACATGCGATGACCGGCTTCATTTCTT
GAACATTCGTCATTGGACTCCTGTCCCGATACCGAACGGGGTGGCTGCCCGGGCCATTTCCCTCTATCTGGAGAC
TGACCATCCTCTGCTCGGCAACTTCGACCCCGACCTCTTCCTAGCGGACCTGACGAGCGCTAAAACCGACTACTG
TTCCTCGGTCCTCGTCAATGCCCTGCTGTACTGGGCGTGTGTAAGATCCGAGCGAGTACGGAGAGAATCGTCGGC
CACTGACAGCATCAACAACAGCAAATGTATAGCGCCCTGGACACCACCGTCGACGACCTTGCGCTGTGCTTCTGC
ACCGAGGCTGAGCGCCTCTGGGATACGGAAAAGAACAACGACTCGGTCCTCAACCTGGCTGCTGCACAGCTCCTG
AGCATGGGCTACCTGGGTCAGGGCAGAAACCACGTGGTGCTGTCGTACCTCAGGCAGGCTTCGGACATGGCTGTG
CGGATGGGCCTGTTTGGCGGCGATGAAGATGACCGGGCCGCAGCGAGGATGCAAAAGTTGACGAGCGAAGCTGTC
AGTGCCCATCTTCACGCCGCCTGGGGAACCTTTAACTGGATAACGTAGGCTGTGCCCCCTTCCCATCCCGACAGC
TAAGCTGCTCTCGATGACTTACAACGAAACCTTTCAGCCTCATGTCACTCTTCTACCGCCAGCCGGGCATGCACT
GCTCTTACCACCCGCCCTGCGTACCGATTCCCGGGGAGGAGTCGATGGATACGGCCCCGAGCTCGCCCGCCTCGA
CTCAAGCGTCGCAGAGGGACAACATGAAGAGCCTATTTCCTCACCTCTGTCGGTTCTGGCGGATCATGCACGAGG
TGAGCTTGGCTTACGAGGAGCAGAAGCATCCGCCGGGATTCAAGGGAACGCTTGCCTTTGCCGAGTTCAAGTTCC
GCGAGCTGCTTGCGTGGAGCAACAGGTTGCCGCGGCACCTGTCGAGGGACGACCAGCACCCGCATTACGTCCAGG
TGTTGCAGTGAGTGGCTGGCATCGGAAGCAAACCAACTTGAGCACTAACACACCTGCTTCTAACCCAATAGCCTC
TGGTTCCATACCGCAATTCTCGACATCTTCAGGCCGTGGATCGACGGCTCGCCGGGTCAGAGTCGACTACGAACC
TTTACCAGCATCGTCAGCTCGCCGATCGTCGTCTACGCCGCTTCGATAAACCAGCTGAAGCAACTCATCGTCAAC
TACAGGCTCAACTTTGTCGCCTCGACCTACACCATACTCTGGCACTCGGCGCTCATCTACCTCAGCAACGCGATC
CTGCAGCTGCCCAGGGAGGAAAACTGGCTGTTTTACTTTCTGGTGTGCGTATACAGCTACGAACGACTCCGGCGG
CCGTGGCGCGTGACGCGGGCCATCGGCACCGCCCTCCTTTCCCTGGCCATGCGCAACGGCAGCCTGTCGAGTGAT
AGAGCGAGAGCGATCCTGAGAGACCTGGATCGTGACGACTTTACTGGCATCCACGTGCTGGGCAAGATCAGGGCT
ACCTTTATGTCTGACTTGGATATGGCGAGGTGTGATCCGGGCCAGGCGACGGTGGAAAAGCAGGCTGGAGAATTT
GAGCAGTATGCTCTGCTGGAGGAGTTTACGAATGAGTTTGGAGATGAGGATGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail