Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7018
Gene name
Locationscaffold_649:3285..5236
Strand+
Gene length (bp)1951
Transcript length (bp)1653
Coding sequence length (bp)1650
Protein length (aa) 550

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00514 Arm Armadillo/beta-catenin-like repeat 1.4E-10 114 153
PF00514 Arm Armadillo/beta-catenin-like repeat 4.4E-13 158 194
PF00514 Arm Armadillo/beta-catenin-like repeat 1.1E-11 197 238
PF00514 Arm Armadillo/beta-catenin-like repeat 2.7E-04 251 279
PF00514 Arm Armadillo/beta-catenin-like repeat 1.6E-07 282 321
PF00514 Arm Armadillo/beta-catenin-like repeat 3.0E-13 324 364
PF00514 Arm Armadillo/beta-catenin-like repeat 7.7E-13 366 405
PF00514 Arm Armadillo/beta-catenin-like repeat 1.8E-08 412 449
PF01749 IBB Importin beta binding domain 4.7E-28 10 103
PF13513 HEAT_EZ HEAT-like repeat 4.1E-09 140 193
PF16186 Arm_3 Atypical Arm repeat 6.2E-23 468 517
PF13646 HEAT_2 HEAT repeats 1.9E-08 129 233
PF02985 HEAT HEAT repeat 2.0E-05 168 194

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q5ZML1|IMA5_CHICK Importin subunit alpha-5 OS=Gallus gallus GN=KPNA1 PE=2 SV=1 8 512 0.0E+00
sp|O14063|IMA1_SCHPO Importin subunit alpha-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cut15 PE=1 SV=1 2 550 0.0E+00
sp|Q5R909|IMA5_PONAB Importin subunit alpha-5 OS=Pongo abelii GN=KPNA1 PE=2 SV=1 8 512 0.0E+00
sp|A2VE08|IMA5_BOVIN Importin subunit alpha-5 OS=Bos taurus GN=KPNA1 PE=2 SV=1 8 512 0.0E+00
sp|P52294|IMA5_HUMAN Importin subunit alpha-5 OS=Homo sapiens GN=KPNA1 PE=1 SV=3 8 512 0.0E+00
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q5ZML1|IMA5_CHICK Importin subunit alpha-5 OS=Gallus gallus GN=KPNA1 PE=2 SV=1 8 512 0.0E+00
sp|O14063|IMA1_SCHPO Importin subunit alpha-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cut15 PE=1 SV=1 2 550 0.0E+00
sp|Q5R909|IMA5_PONAB Importin subunit alpha-5 OS=Pongo abelii GN=KPNA1 PE=2 SV=1 8 512 0.0E+00
sp|A2VE08|IMA5_BOVIN Importin subunit alpha-5 OS=Bos taurus GN=KPNA1 PE=2 SV=1 8 512 0.0E+00
sp|P52294|IMA5_HUMAN Importin subunit alpha-5 OS=Homo sapiens GN=KPNA1 PE=1 SV=3 8 512 0.0E+00
sp|Q76P29|IMAB_DICDI Importin subunit alpha-B OS=Dictyostelium discoideum GN=DDB_G0272318 PE=3 SV=1 3 532 0.0E+00
sp|Q56R16|IMA6_RAT Importin subunit alpha-6 OS=Rattus norvegicus GN=Kpna5 PE=2 SV=1 9 517 0.0E+00
sp|O15131|IMA6_HUMAN Importin subunit alpha-6 OS=Homo sapiens GN=KPNA5 PE=1 SV=2 9 541 0.0E+00
sp|O04294|IMPA3_ARATH Importin subunit alpha-3 OS=Arabidopsis thaliana GN=IMPA3 PE=1 SV=2 8 541 0.0E+00
sp|Q503E9|IMA6_DANRE Importin subunit alpha-6 OS=Danio rerio GN=kpna5 PE=2 SV=2 9 541 0.0E+00
sp|Q9FWY7|IMPA6_ARATH Importin subunit alpha-6 OS=Arabidopsis thaliana GN=IMPA6 PE=2 SV=1 8 541 0.0E+00
sp|O60684|IMA7_HUMAN Importin subunit alpha-7 OS=Homo sapiens GN=KPNA6 PE=1 SV=1 9 519 0.0E+00
sp|F4JL11|IMPA2_ARATH Importin subunit alpha-2 OS=Arabidopsis thaliana GN=IMPA2 PE=1 SV=1 8 541 0.0E+00
sp|O94374|IMA2_SCHPO Importin subunit alpha-2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=imp1 PE=1 SV=1 1 550 0.0E+00
sp|Q02821|IMA1_YEAST Importin subunit alpha OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SRP1 PE=1 SV=1 4 541 0.0E+00
sp|Q96321|IMPA1_ARATH Importin subunit alpha-1 OS=Arabidopsis thaliana GN=IMPA1 PE=1 SV=2 8 542 0.0E+00
sp|Q9SLX0|IMA1B_ORYSJ Importin subunit alpha-1b OS=Oryza sativa subsp. japonica GN=Os05g0155500 PE=1 SV=2 8 541 0.0E+00
sp|Q71VM4|IMA1A_ORYSJ Importin subunit alpha-1a OS=Oryza sativa subsp. japonica GN=Os01g0253300 PE=1 SV=2 8 534 0.0E+00
sp|Q5RBV0|IMA7_PONAB Importin subunit alpha-7 OS=Pongo abelii GN=KPNA6 PE=2 SV=1 9 519 0.0E+00
sp|O22478|IMA_SOLLC Importin subunit alpha OS=Solanum lycopersicum PE=2 SV=2 8 542 0.0E+00
sp|O35345|IMA7_MOUSE Importin subunit alpha-7 OS=Mus musculus GN=Kpna6 PE=1 SV=2 9 519 0.0E+00
sp|Q0V7M0|IMA7_BOVIN Importin subunit alpha-7 OS=Bos taurus GN=KPNA6 PE=2 SV=1 9 519 0.0E+00
sp|O80480|IMPA4_ARATH Importin subunit alpha-4 OS=Arabidopsis thaliana GN=IMPA4 PE=1 SV=1 17 542 0.0E+00
sp|P83953|IMA5_RAT Importin subunit alpha-5 OS=Rattus norvegicus GN=Kpna1 PE=1 SV=1 8 512 1.0E-179
sp|Q60960|IMA5_MOUSE Importin subunit alpha-5 OS=Mus musculus GN=Kpna1 PE=1 SV=2 8 512 1.0E-178
sp|Q9FJ09|IMPA5_ARATH Importin subunit alpha-5 OS=Arabidopsis thaliana GN=IMPA5 PE=2 SV=1 8 505 2.0E-172
sp|O00629|IMA3_HUMAN Importin subunit alpha-3 OS=Homo sapiens GN=KPNA4 PE=1 SV=1 9 541 1.0E-161
sp|O35343|IMA3_MOUSE Importin subunit alpha-3 OS=Mus musculus GN=Kpna4 PE=1 SV=1 9 541 1.0E-160
sp|O35344|IMA4_MOUSE Importin subunit alpha-4 OS=Mus musculus GN=Kpna3 PE=1 SV=1 9 541 8.0E-159
sp|O00505|IMA4_HUMAN Importin subunit alpha-4 OS=Homo sapiens GN=KPNA3 PE=1 SV=2 1 541 2.0E-158
sp|Q9M9X7|IMPA7_ARATH Importin subunit alpha-7 OS=Arabidopsis thaliana GN=IMPA7 PE=2 SV=1 26 506 5.0E-152
sp|P52293|IMA1_MOUSE Importin subunit alpha-1 OS=Mus musculus GN=Kpna2 PE=1 SV=2 6 541 6.0E-151
sp|P52292|IMA1_HUMAN Importin subunit alpha-1 OS=Homo sapiens GN=KPNA2 PE=1 SV=1 7 541 2.0E-150
sp|Q19969|IMA3_CAEEL Importin subunit alpha-3 OS=Caenorhabditis elegans GN=ima-3 PE=1 SV=2 13 542 2.0E-144
sp|P52171|IMA1_XENLA Importin subunit alpha-1 OS=Xenopus laevis GN=kpna2 PE=1 SV=2 10 541 2.0E-140
sp|P52170|IMA5_XENLA Importin subunit alpha-5 OS=Xenopus laevis GN=kpna1 PE=1 SV=2 10 541 8.0E-139
sp|A9QM74|IMA8_HUMAN Importin subunit alpha-8 OS=Homo sapiens GN=KPNA7 PE=1 SV=1 7 517 1.0E-125
sp|P52295|IMA_DROME Importin subunit alpha OS=Drosophila melanogaster GN=Pen PE=1 SV=2 10 541 3.0E-123
sp|C1JZ66|IMA8_BOVIN Importin subunit alpha-8 OS=Bos taurus GN=KPNA7 PE=1 SV=2 7 512 8.0E-121
sp|Q557F4|IMA1A_DICDI Probable importin subunit alpha-A OS=Dictyostelium discoideum GN=DDB_G0273149 PE=3 SV=1 1 528 2.0E-120
sp|C6K7I2|IMA8_PIG Importin subunit alpha-8 OS=Sus scrofa GN=KPNA7 PE=2 SV=2 7 517 2.0E-117
sp|C0LLJ0|IMA8_MOUSE Importin subunit alpha-8 OS=Mus musculus GN=Kpna7 PE=1 SV=1 1 513 8.0E-107
sp|Q9FJ92|IMPA8_ARATH Importin subunit alpha-8 OS=Arabidopsis thaliana GN=IMPA8 PE=3 SV=1 76 502 3.0E-105
sp|P91276|IMA2_CAEEL Importin subunit alpha-2 OS=Caenorhabditis elegans GN=ima-2 PE=1 SV=1 17 509 4.0E-97
sp|F4KF65|IMPA9_ARATH Importin subunit alpha-9 OS=Arabidopsis thaliana GN=IMPA9 PE=3 SV=1 27 514 5.0E-46
sp|Q9FYP9|IMAP2_ORYSJ Importin subunit alpha-2 OS=Oryza sativa subsp. japonica GN=Os01g0158000 PE=2 SV=1 8 514 1.0E-44
sp|Q22560|IMA1_CAEEL Importin subunit alpha-1 OS=Caenorhabditis elegans GN=ima-1 PE=1 SV=1 1 509 3.0E-21
sp|Q5EFZ4|VAC8_PICPA Vacuolar protein 8 OS=Komagataella pastoris GN=VAC8 PE=3 SV=3 90 402 3.0E-18
sp|Q4I1B1|VAC8_GIBZE Vacuolar protein 8 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=VAC8 PE=3 SV=4 90 402 8.0E-16
sp|Q2U5T5|VAC8_ASPOR Vacuolar protein 8 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=vac8 PE=3 SV=1 73 431 3.0E-15
sp|Q4WVW4|VAC8_ASPFU Vacuolar protein 8 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=vac8 PE=3 SV=1 90 431 3.0E-15
sp|Q6C5Y8|VAC8_YARLI Vacuolar protein 8 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=VAC8 PE=3 SV=1 90 454 6.0E-14
sp|Q7RXW1|VAC8_NEUCR Vacuolar protein 8 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=vac8 PE=3 SV=4 90 402 7.0E-14
sp|P0CM61|VAC8_CRYNB Vacuolar protein 8 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=VAC8 PE=3 SV=1 91 402 9.0E-14
sp|P0CM60|VAC8_CRYNJ Vacuolar protein 8 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=VAC8 PE=3 SV=1 91 402 9.0E-14
sp|Q6BTZ4|VAC8_DEBHA Vacuolar protein 8 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=VAC8 PE=3 SV=4 90 402 3.0E-13
sp|Q59MN0|VAC8_CANAL Vacuolar protein 8 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=VAC8 PE=3 SV=3 90 402 4.0E-13
sp|Q6CX49|VAC8_KLULA Vacuolar protein 8 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=VAC8 PE=3 SV=3 90 434 2.0E-12
sp|Q9JLI7|SPAG6_MOUSE Sperm-associated antigen 6 OS=Mus musculus GN=Spag6 PE=1 SV=1 51 395 1.0E-11
sp|Q4I1B1|VAC8_GIBZE Vacuolar protein 8 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=VAC8 PE=3 SV=4 69 401 4.0E-11
sp|P0CM60|VAC8_CRYNJ Vacuolar protein 8 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=VAC8 PE=3 SV=1 86 406 4.0E-11
sp|P0CM61|VAC8_CRYNB Vacuolar protein 8 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=VAC8 PE=3 SV=1 86 406 4.0E-11
sp|Q9JLI7|SPAG6_MOUSE Sperm-associated antigen 6 OS=Mus musculus GN=Spag6 PE=1 SV=1 271 451 1.0E-10
sp|Q9JLI7|SPAG6_MOUSE Sperm-associated antigen 6 OS=Mus musculus GN=Spag6 PE=1 SV=1 100 436 2.0E-10
sp|B7U179|ABAP1_ARATH ARMADILLO BTB ARABIDOPSIS PROTEIN 1 OS=Arabidopsis thaliana GN=ABAP1 PE=1 SV=1 116 401 2.0E-10
sp|O75602|SPAG6_HUMAN Sperm-associated antigen 6 OS=Homo sapiens GN=SPAG6 PE=2 SV=1 51 390 4.0E-10
sp|B7U179|ABAP1_ARATH ARMADILLO BTB ARABIDOPSIS PROTEIN 1 OS=Arabidopsis thaliana GN=ABAP1 PE=1 SV=1 114 313 5.0E-10
sp|Q757R0|VAC8_ASHGO Vacuolar protein 8 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=VAC8 PE=3 SV=3 90 402 8.0E-10
sp|Q4I1B1|VAC8_GIBZE Vacuolar protein 8 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=VAC8 PE=3 SV=4 169 457 9.0E-10
sp|O75602|SPAG6_HUMAN Sperm-associated antigen 6 OS=Homo sapiens GN=SPAG6 PE=2 SV=1 250 451 1.0E-09
sp|B9DHT4|ARIA_ARATH ARM REPEAT PROTEIN INTERACTING WITH ABF2 OS=Arabidopsis thaliana GN=ARIA PE=1 SV=2 161 401 1.0E-09
sp|Q4WVW4|VAC8_ASPFU Vacuolar protein 8 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=vac8 PE=3 SV=1 86 337 6.0E-09
sp|Q5EFZ4|VAC8_PICPA Vacuolar protein 8 OS=Komagataella pastoris GN=VAC8 PE=3 SV=3 86 401 6.0E-09
sp|Q757R0|VAC8_ASHGO Vacuolar protein 8 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=VAC8 PE=3 SV=3 86 383 9.0E-09
sp|P39968|VAC8_YEAST Vacuolar protein 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VAC8 PE=1 SV=3 86 383 1.0E-08
sp|Q5EFZ4|VAC8_PICPA Vacuolar protein 8 OS=Komagataella pastoris GN=VAC8 PE=3 SV=3 45 295 1.0E-08
sp|Q7RXW1|VAC8_NEUCR Vacuolar protein 8 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=vac8 PE=3 SV=4 86 406 1.0E-08
sp|O75602|SPAG6_HUMAN Sperm-associated antigen 6 OS=Homo sapiens GN=SPAG6 PE=2 SV=1 100 436 2.0E-08
sp|Q2GW27|VAC8_CHAGB Vacuolar protein 8 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=VAC8 PE=3 SV=3 90 402 2.0E-08
sp|Q6FJV1|VAC8_CANGA Vacuolar protein 8 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=VAC8 PE=3 SV=3 124 458 3.0E-08
sp|Q6C5Y8|VAC8_YARLI Vacuolar protein 8 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=VAC8 PE=3 SV=1 86 406 4.0E-08
sp|Q6FJV1|VAC8_CANGA Vacuolar protein 8 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=VAC8 PE=3 SV=3 86 383 6.0E-08
sp|P39968|VAC8_YEAST Vacuolar protein 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VAC8 PE=1 SV=3 124 485 6.0E-08
sp|Q6CX49|VAC8_KLULA Vacuolar protein 8 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=VAC8 PE=3 SV=3 86 457 7.0E-08
sp|P0CM61|VAC8_CRYNB Vacuolar protein 8 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=VAC8 PE=3 SV=1 174 483 7.0E-08
sp|P0CM60|VAC8_CRYNJ Vacuolar protein 8 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=VAC8 PE=3 SV=1 174 483 7.0E-08
sp|Q2U5T5|VAC8_ASPOR Vacuolar protein 8 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=vac8 PE=3 SV=1 45 320 1.0E-07
sp|Q4WVW4|VAC8_ASPFU Vacuolar protein 8 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=vac8 PE=3 SV=1 45 320 2.0E-07
sp|Q757R0|VAC8_ASHGO Vacuolar protein 8 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=VAC8 PE=3 SV=3 206 403 4.0E-07
sp|Q2GW27|VAC8_CHAGB Vacuolar protein 8 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=VAC8 PE=3 SV=3 86 401 4.0E-07
sp|Q6CX49|VAC8_KLULA Vacuolar protein 8 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=VAC8 PE=3 SV=3 169 449 1.0E-06
sp|A2RT91|ANKAR_MOUSE Ankyrin and armadillo repeat-containing protein OS=Mus musculus GN=Ankar PE=2 SV=1 120 383 1.0E-06
sp|B9DHT4|ARIA_ARATH ARM REPEAT PROTEIN INTERACTING WITH ABF2 OS=Arabidopsis thaliana GN=ARIA PE=1 SV=2 124 217 2.0E-06
sp|Q6BTZ4|VAC8_DEBHA Vacuolar protein 8 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=VAC8 PE=3 SV=4 86 401 2.0E-06
sp|Q59MN0|VAC8_CANAL Vacuolar protein 8 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=VAC8 PE=3 SV=3 86 359 2.0E-06
sp|O43028|VAC8_SCHPO Vacuolar protein 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vac8 PE=1 SV=4 91 474 2.0E-06
sp|Q6C5Y8|VAC8_YARLI Vacuolar protein 8 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=VAC8 PE=3 SV=1 83 386 3.0E-06
sp|O75602|SPAG6_HUMAN Sperm-associated antigen 6 OS=Homo sapiens GN=SPAG6 PE=2 SV=1 118 350 8.0E-06
sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1 296 431 9.0E-06
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GO

GO Term Description Terminal node
GO:0061608 nuclear import signal receptor activity Yes
GO:0005515 protein binding Yes
GO:0006606 protein import into nucleus Yes
GO:0140104 molecular carrier activity No
GO:0008150 biological_process No
GO:0070727 cellular macromolecule localization No
GO:0071705 nitrogen compound transport No
GO:0033365 protein localization to organelle No
GO:0051234 establishment of localization No
GO:0051169 nuclear transport No
GO:0140142 nucleocytoplasmic carrier activity No
GO:0006886 intracellular protein transport No
GO:0006810 transport No
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0034504 protein localization to nucleus No
GO:0033036 macromolecule localization No
GO:0045184 establishment of protein localization No
GO:0005488 binding No
GO:0009987 cellular process No
GO:0051641 cellular localization No
GO:0051649 establishment of localization in cell No
GO:0008104 protein localization No
GO:0072594 establishment of protein localization to organelle No
GO:0046907 intracellular transport No
GO:0006913 nucleocytoplasmic transport No
GO:0051170 import into nucleus No
GO:0071702 organic substance transport No
GO:0015031 protein transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 50 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 238.08 113.30 362.86
CcL In ants, during behavior modification 317.65 135.27 500.03
CcD In ants, recently dead 329.11 144.52 513.70

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.302573 no
SC16a CcD 0.248233 no
CcL CcD 0.918235 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7018
MAERYIPEHRRTQFKAKNTFKPEELRRRREEQQVEIRKAKREENLAKRRGIGTGENRPGASLGAAPDSDDESAPT
ESQLNEDLPLMVQGVFSEQIDLQIQATTKFRKLLSKERNPPIEEVIKTGVVSRFVEFLRSPHTLVQFEAAWALTN
IASGSATQTQVVIEAGAVPIFVELLASPEPDVREQAVWALGNIAGDSPQCRDYVLSCGALKPLLNLLGDSRKLSM
LRNATWTLSNFCRGKTPQPDWNTIAPALAVLSKLVYSLDDEVLIDACWAISYLSDGSNDKIQAVIEAGIPRRLVE
LLMHSSTSVQTPALRSVGNIVTGDDVQTQVIINCGALPCLLSLLSSTKDGIRKEACWTISNITAGNSSQIQSVID
ANIIPPLIHLLQNGDLKTRKEACWAISNATSGGLQKPEQIRYLVSQGCIKPLCDLLSCPDNKIIQVALDGLENIL
KIGDLDKQSAGEGADSINRYALFIEECGGMEKIHECQNNANEEIYVKSYHIIEKYFSDDAENDEGMVQPAGANGT
FGFGANGPAQSGGFNFANGGDSMDM
Coding >Ophio5|7018
ATGGCGGAGCGATATATCCCCGAGCATCGCCGGACGCAGTTCAAGGCCAAGAATACGTTCAAACCTGAGGAGCTG
CGTCGTCGTCGCGAGGAGCAGCAGGTTGAGATCCGCAAGGCAAAACGCGAAGAGAACCTGGCCAAGCGACGCGGC
ATCGGCACTGGTGAGAATCGTCCGGGCGCCTCGCTTGGCGCTGCCCCCGACAGTGACGATGAGTCGGCTCCCACG
GAGTCACAGTTAAACGAGGACCTGCCTCTGATGGTTCAGGGCGTCTTCTCGGAACAGATCGACCTCCAGATCCAA
GCCACCACCAAGTTCCGCAAACTCCTGTCCAAGGAGCGAAATCCCCCCATCGAAGAGGTCATCAAGACGGGCGTC
GTCAGCCGCTTCGTCGAATTCCTGCGCTCACCCCATACCCTCGTTCAGTTCGAGGCCGCCTGGGCGCTGACAAAC
ATCGCATCCGGCTCCGCCACCCAGACACAGGTGGTCATCGAGGCCGGCGCCGTGCCCATCTTTGTTGAGCTTCTA
GCCAGCCCGGAGCCTGATGTGCGGGAACAGGCCGTCTGGGCCCTCGGCAACATTGCCGGCGACAGTCCTCAGTGC
CGCGATTATGTGCTCAGCTGCGGCGCCTTGAAGCCCCTGCTGAACCTCCTCGGCGACAGCCGCAAGCTCAGCATG
CTGCGCAATGCCACCTGGACTCTGAGCAACTTTTGCCGTGGCAAGACGCCGCAGCCTGACTGGAACACGATTGCG
CCTGCCCTGGCGGTTCTCTCCAAGCTGGTTTACTCTCTGGATGACGAGGTCCTCATCGATGCTTGCTGGGCCATA
TCCTACTTGTCCGATGGCTCCAACGACAAAATCCAGGCCGTCATTGAGGCTGGCATTCCGCGCAGACTTGTTGAG
CTGCTGATGCACTCCTCGACGTCGGTCCAGACGCCCGCTCTGCGGTCCGTCGGCAACATCGTGACTGGTGACGAC
GTCCAGACGCAGGTCATCATCAACTGTGGCGCTCTGCCGTGCTTGCTGTCCCTCCTCAGCTCTACCAAGGATGGT
ATCCGCAAGGAGGCGTGCTGGACCATTTCCAACATAACGGCTGGCAACTCGTCTCAGATCCAGTCCGTCATCGAC
GCCAATATCATTCCGCCCCTCATTCACTTGCTCCAGAATGGCGACCTCAAGACGCGCAAGGAGGCTTGCTGGGCC
ATCAGTAATGCTACTTCGGGCGGACTCCAGAAGCCAGAGCAGATCCGGTATCTCGTCTCCCAGGGCTGCATCAAG
CCTCTCTGCGACCTCCTCTCGTGCCCCGACAATAAGATCATCCAGGTGGCGCTCGACGGCCTCGAGAACATACTC
AAGATTGGCGATCTCGACAAGCAGTCTGCCGGCGAGGGCGCCGACTCGATCAACCGCTACGCCTTGTTCATTGAG
GAGTGCGGCGGCATGGAGAAGATTCACGAGTGCCAGAACAACGCCAACGAGGAGATCTACGTCAAGTCGTACCAC
ATCATCGAGAAGTACTTTTCAGACGACGCCGAGAACGACGAAGGCATGGTGCAGCCGGCTGGAGCTAATGGCACG
TTCGGCTTCGGTGCCAACGGTCCTGCTCAGTCGGGTGGCTTCAACTTTGCCAATGGCGGTGACTCGATGGACATG
Transcript >Ophio5|7018
ATGGCGGAGCGATATATCCCCGAGCATCGCCGGACGCAGTTCAAGGCCAAGAATACGTTCAAACCTGAGGAGCTG
CGTCGTCGTCGCGAGGAGCAGCAGGTTGAGATCCGCAAGGCAAAACGCGAAGAGAACCTGGCCAAGCGACGCGGC
ATCGGCACTGGTGAGAATCGTCCGGGCGCCTCGCTTGGCGCTGCCCCCGACAGTGACGATGAGTCGGCTCCCACG
GAGTCACAGTTAAACGAGGACCTGCCTCTGATGGTTCAGGGCGTCTTCTCGGAACAGATCGACCTCCAGATCCAA
GCCACCACCAAGTTCCGCAAACTCCTGTCCAAGGAGCGAAATCCCCCCATCGAAGAGGTCATCAAGACGGGCGTC
GTCAGCCGCTTCGTCGAATTCCTGCGCTCACCCCATACCCTCGTTCAGTTCGAGGCCGCCTGGGCGCTGACAAAC
ATCGCATCCGGCTCCGCCACCCAGACACAGGTGGTCATCGAGGCCGGCGCCGTGCCCATCTTTGTTGAGCTTCTA
GCCAGCCCGGAGCCTGATGTGCGGGAACAGGCCGTCTGGGCCCTCGGCAACATTGCCGGCGACAGTCCTCAGTGC
CGCGATTATGTGCTCAGCTGCGGCGCCTTGAAGCCCCTGCTGAACCTCCTCGGCGACAGCCGCAAGCTCAGCATG
CTGCGCAATGCCACCTGGACTCTGAGCAACTTTTGCCGTGGCAAGACGCCGCAGCCTGACTGGAACACGATTGCG
CCTGCCCTGGCGGTTCTCTCCAAGCTGGTTTACTCTCTGGATGACGAGGTCCTCATCGATGCTTGCTGGGCCATA
TCCTACTTGTCCGATGGCTCCAACGACAAAATCCAGGCCGTCATTGAGGCTGGCATTCCGCGCAGACTTGTTGAG
CTGCTGATGCACTCCTCGACGTCGGTCCAGACGCCCGCTCTGCGGTCCGTCGGCAACATCGTGACTGGTGACGAC
GTCCAGACGCAGGTCATCATCAACTGTGGCGCTCTGCCGTGCTTGCTGTCCCTCCTCAGCTCTACCAAGGATGGT
ATCCGCAAGGAGGCGTGCTGGACCATTTCCAACATAACGGCTGGCAACTCGTCTCAGATCCAGTCCGTCATCGAC
GCCAATATCATTCCGCCCCTCATTCACTTGCTCCAGAATGGCGACCTCAAGACGCGCAAGGAGGCTTGCTGGGCC
ATCAGTAATGCTACTTCGGGCGGACTCCAGAAGCCAGAGCAGATCCGGTATCTCGTCTCCCAGGGCTGCATCAAG
CCTCTCTGCGACCTCCTCTCGTGCCCCGACAATAAGATCATCCAGGTGGCGCTCGACGGCCTCGAGAACATACTC
AAGATTGGCGATCTCGACAAGCAGTCTGCCGGCGAGGGCGCCGACTCGATCAACCGCTACGCCTTGTTCATTGAG
GAGTGCGGCGGCATGGAGAAGATTCACGAGTGCCAGAACAACGCCAACGAGGAGATCTACGTCAAGTCGTACCAC
ATCATCGAGAAGTACTTTTCAGACGACGCCGAGAACGACGAAGGCATGGTGCAGCCGGCTGGAGCTAATGGCACG
TTCGGCTTCGGTGCCAACGGTCCTGCTCAGTCGGGTGGCTTCAACTTTGCCAATGGCGGTGACTCGATGGACATG
TAG
Gene >Ophio5|7018
ATGGCGGAGCGATATATCCCCGAGCATCGCCGGACGCAGTTCAAGGCCAAGAATACGTTCAAACCTGAGGAGCTG
CGTCGTCGTCGCGAGGAGCAGCAGGTTGAGATCCGCAAGGCAAAACGCGAAGAGAACCTGGCCAAGCGACGCGGC
ATCGGCACTGGTGAGAATCGTCCGGGCGCCTCGCTTGGCGCTGCCCCCGACAGTGACGATGAGTCGGCTCCCACG
GAGTCACAGGTATGTCGTGCTGAGTCTTCTCTGCGTTCTTTGTGTTTGCCTCATCCCCCCCCCCCCCTCTCCCCC
CCCTCCCCCCCCCCAAAAAAAAAACAGTTCGTTTCCACAGCGGCACCCTTACCCTCTGTGGGCTGCCCCCACACG
CCTGCACCGCAACGTCCTGGCCCTTGCTCGACGCTTTTCATTTGTATCCATTGCTGCATCACCTGGGCTGACGTT
CACGTGTCTAGTTAAACGAGGACCTGCCTCTGATGGTTCAGGGCGTCTTCTCGGAACAGATCGACCTCCAGATCC
AAGCCACCACCAAGTTCCGCAAACTCCTGTCCAAGGAGCGAAATCCCCCCATCGAAGAGGTCATCAAGACGGGCG
TCGTCAGCCGCTTCGTCGAATTCCTGCGCTCACCCCATACCCTCGTTCAGTTCGAGGCCGCCTGGGCGCTGACAA
ACATCGCATCCGGCTCCGCCACCCAGACACAGGTGGTCATCGAGGCCGGCGCCGTGCCCATCTTTGTTGAGCTTC
TAGCCAGCCCGGAGCCTGATGTGCGGGAACAGGCCGTCTGGGCCCTCGGCAACATTGCCGGCGACAGTCCTCAGT
GCCGCGATTATGTGCTCAGCTGCGGCGCCTTGAAGCCCCTGCTGAACCTCCTCGGCGACAGCCGCAAGCTCAGCA
TGCTGCGCAATGCCACCTGGACTCTGAGCAACTTTTGCCGTGGCAAGACGCCGCAGCCTGACTGGAACACGGTAA
AGTTCACCCTTCTCGACTTGACCCCTACTTGCAACGTCTGTTTCTAACCGAGAATTCATATCCACAGATTGCGCC
TGCCCTGGCGGTTCTCTCCAAGCTGGTTTACTCTCTGGATGACGAGGTCCTCATCGATGCTTGCTGGGCCATATC
CTACTTGTCCGATGGCTCCAACGACAAAATCCAGGCCGTCATTGAGGCTGGCATTCCGCGCAGACTTGTTGAGCT
GCTGATGCACTCCTCGACGTCGGTCCAGACGCCCGCTCTGCGGTCCGTCGGCAACATCGTGACTGGTGACGACGT
CCAGACGCAGGTCATCATCAACTGTGGCGCTCTGCCGTGCTTGCTGTCCCTCCTCAGCTCTACCAAGGATGGTAT
CCGCAAGGAGGCGTGCTGGACCATTTCCAACATAACGGCTGGCAACTCGTCTCAGATCCAGTCCGTCATCGACGC
CAATATCATTCCGCCCCTCATTCACTTGCTCCAGAATGGCGACCTCAAGACGCGCAAGGAGGCTTGCTGGGCCAT
CAGTAATGCTACTTCGGGCGGACTCCAGAAGCCAGAGCAGATCCGGTATCTCGTCTCCCAGGGCTGCATCAAGCC
TCTCTGCGACCTCCTCTCGTGCCCCGACAATAAGATCATCCAGGTGGCGCTCGACGGCCTCGAGAACATACTCAA
GATTGGCGATCTCGACAAGCAGTCTGCCGGCGAGGGCGCCGACTCGATCAACCGCTACGCCTTGTTCATTGAGGA
GTGCGGCGGCATGGAGAAGATTCACGAGTGCCAGAACAACGCCAACGAGGAGATCTACGTCAAGTCGTACCACAT
CATCGAGAAGTACTTTTCAGACGACGCCGAGAACGACGAAGGCATGGTGCAGCCGGCTGGAGCTAATGGCACGTT
CGGCTTCGGTGCCAACGGTCCTGCTCAGTCGGGTGGCTTCAACTTTGCCAATGGCGGTGACTCGATGGACATGTA
G

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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