Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7006
Gene name
Locationscaffold_644:6557..7427
Strand-
Gene length (bp)870
Transcript length (bp)870
Coding sequence length (bp)867
Protein length (aa) 289

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01375 Enterotoxin_a Heat-labile enterotoxin alpha chain 1.1E-16 66 206

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|A2PU44|CHELT_VIBCL NAD(+)--arginine ADP-ribosyltransferase Chelt OS=Vibrio cholerae GN=A51_B1772 PE=1 SV=1 62 195 2.0E-07
sp|P43530|ELAH_ECOH1 Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 65 206 4.0E-07
sp|P06717|ELAP_ECOLX Heat-labile enterotoxin A chain OS=Escherichia coli GN=eltA PE=1 SV=1 65 206 4.0E-07
sp|P01555|CHTA_VIBCH Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 68 206 4.0E-07
sp|P13810|E2AA_ECOLX Heat-labile enterotoxin IIA, A chain OS=Escherichia coli PE=3 SV=1 72 192 6.0E-07

GO

GO Term Description Terminal node
GO:0090729 toxin activity Yes
GO:0005615 extracellular space Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7006
MGNSGWTVSAMAFCLLLGPSSIFAAPSTSASRQPIRFDSGIDVGFTTEEDKSLFRRRHGRAPALVHRNESALFRG
DARTPEFFKNQGGIFPTQDEPLTNGSYTLDVHHKGHKGVASAYTSTTKLFRTAIYYATNSIMSAPREKRNKDGYI
YQIRPTPNMIDLSTAGLVRQKYKTEYEVSALGGIDWKQVEAWILIPGNMAEMYHYNIPEIWDERRFFDFENSHLE
WHTNDDYDARYDNFTYNTHPQPQLTGDANSEPYSHKSSEQWAHKFMDEYGSAVGWNGSFVWERS
Coding >Ophio5|7006
ATGGGCAACTCTGGGTGGACGGTTTCGGCCATGGCGTTCTGCCTGCTTCTTGGGCCGTCCAGCATATTCGCTGCC
CCTTCTACATCTGCATCCCGCCAGCCAATTCGTTTCGACTCGGGCATTGACGTCGGCTTCACCACCGAAGAGGAC
AAGTCCCTCTTCCGGCGGAGACATGGACGCGCCCCTGCCTTGGTTCACCGAAATGAGTCTGCCCTTTTCCGAGGC
GATGCTCGCACGCCAGAATTCTTCAAGAATCAAGGCGGCATCTTTCCCACACAGGACGAGCCCTTGACGAATGGT
TCCTACACGCTCGACGTTCACCATAAAGGCCACAAGGGCGTGGCCAGCGCTTACACGTCGACGACGAAACTGTTC
AGGACTGCAATCTACTATGCTACCAACTCCATCATGTCTGCCCCGAGGGAAAAGCGAAATAAAGACGGCTACATC
TATCAGATCCGCCCAACACCCAACATGATTGACTTGTCCACGGCTGGCCTTGTGCGCCAGAAGTACAAGACGGAG
TACGAGGTTTCGGCCCTGGGGGGCATCGACTGGAAACAGGTCGAGGCGTGGATACTCATTCCCGGCAACATGGCG
GAGATGTACCACTACAACATTCCCGAAATCTGGGACGAGAGGAGATTCTTCGACTTCGAAAATAGCCATCTGGAG
TGGCATACCAACGACGACTATGATGCCAGATATGACAACTTTACGTATAATACTCACCCTCAGCCGCAACTCACT
GGTGACGCCAACAGTGAGCCGTACAGCCACAAGTCATCGGAGCAGTGGGCACATAAATTTATGGATGAGTACGGT
TCGGCTGTGGGCTGGAACGGCAGCTTTGTCTGGGAGAGAAGC
Transcript >Ophio5|7006
ATGGGCAACTCTGGGTGGACGGTTTCGGCCATGGCGTTCTGCCTGCTTCTTGGGCCGTCCAGCATATTCGCTGCC
CCTTCTACATCTGCATCCCGCCAGCCAATTCGTTTCGACTCGGGCATTGACGTCGGCTTCACCACCGAAGAGGAC
AAGTCCCTCTTCCGGCGGAGACATGGACGCGCCCCTGCCTTGGTTCACCGAAATGAGTCTGCCCTTTTCCGAGGC
GATGCTCGCACGCCAGAATTCTTCAAGAATCAAGGCGGCATCTTTCCCACACAGGACGAGCCCTTGACGAATGGT
TCCTACACGCTCGACGTTCACCATAAAGGCCACAAGGGCGTGGCCAGCGCTTACACGTCGACGACGAAACTGTTC
AGGACTGCAATCTACTATGCTACCAACTCCATCATGTCTGCCCCGAGGGAAAAGCGAAATAAAGACGGCTACATC
TATCAGATCCGCCCAACACCCAACATGATTGACTTGTCCACGGCTGGCCTTGTGCGCCAGAAGTACAAGACGGAG
TACGAGGTTTCGGCCCTGGGGGGCATCGACTGGAAACAGGTCGAGGCGTGGATACTCATTCCCGGCAACATGGCG
GAGATGTACCACTACAACATTCCCGAAATCTGGGACGAGAGGAGATTCTTCGACTTCGAAAATAGCCATCTGGAG
TGGCATACCAACGACGACTATGATGCCAGATATGACAACTTTACGTATAATACTCACCCTCAGCCGCAACTCACT
GGTGACGCCAACAGTGAGCCGTACAGCCACAAGTCATCGGAGCAGTGGGCACATAAATTTATGGATGAGTACGGT
TCGGCTGTGGGCTGGAACGGCAGCTTTGTCTGGGAGAGAAGCTGA
Gene >Ophio5|7006
ATGGGCAACTCTGGGTGGACGGTTTCGGCCATGGCGTTCTGCCTGCTTCTTGGGCCGTCCAGCATATTCGCTGCC
CCTTCTACATCTGCATCCCGCCAGCCAATTCGTTTCGACTCGGGCATTGACGTCGGCTTCACCACCGAAGAGGAC
AAGTCCCTCTTCCGGCGGAGACATGGACGCGCCCCTGCCTTGGTTCACCGAAATGAGTCTGCCCTTTTCCGAGGC
GATGCTCGCACGCCAGAATTCTTCAAGAATCAAGGCGGCATCTTTCCCACACAGGACGAGCCCTTGACGAATGGT
TCCTACACGCTCGACGTTCACCATAAAGGCCACAAGGGCGTGGCCAGCGCTTACACGTCGACGACGAAACTGTTC
AGGACTGCAATCTACTATGCTACCAACTCCATCATGTCTGCCCCGAGGGAAAAGCGAAATAAAGACGGCTACATC
TATCAGATCCGCCCAACACCCAACATGATTGACTTGTCCACGGCTGGCCTTGTGCGCCAGAAGTACAAGACGGAG
TACGAGGTTTCGGCCCTGGGGGGCATCGACTGGAAACAGGTCGAGGCGTGGATACTCATTCCCGGCAACATGGCG
GAGATGTACCACTACAACATTCCCGAAATCTGGGACGAGAGGAGATTCTTCGACTTCGAAAATAGCCATCTGGAG
TGGCATACCAACGACGACTATGATGCCAGATATGACAACTTTACGTATAATACTCACCCTCAGCCGCAACTCACT
GGTGACGCCAACAGTGAGCCGTACAGCCACAAGTCATCGGAGCAGTGGGCACATAAATTTATGGATGAGTACGGT
TCGGCTGTGGGCTGGAACGGCAGCTTTGTCTGGGAGAGAAGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail