Protein ID | Ophio5|7004 |
Gene name | |
Location | scaffold_644:99..1543 |
Strand | + |
Gene length (bp) | 1444 |
Transcript length (bp) | 1155 |
Coding sequence length (bp) | 1152 |
Protein length (aa) | 384 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01545 | Cation_efflux | Cation efflux family | 3.8E-25 | 76 | 260 |
PF16916 | ZT_dimer | Dimerisation domain of Zinc Transporter | 5.5E-07 | 280 | 345 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9LDU0|MTP7_ORYSJ | Metal tolerance protein 7 OS=Oryza sativa subsp. japonica GN=MTP7 PE=2 SV=1 | 26 | 357 | 1.0E-65 |
sp|Q10PP8|MTP4_ORYSJ | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1 | 13 | 352 | 4.0E-64 |
sp|Q0WU02|MTP10_ARATH | Metal tolerance protein 10 OS=Arabidopsis thaliana GN=MTP10 PE=2 SV=1 | 29 | 357 | 1.0E-63 |
sp|Q9SAJ7|MTP9_ARATH | Metal tolerance protein 9 OS=Arabidopsis thaliana GN=MTP9 PE=2 SV=2 | 29 | 357 | 7.0E-63 |
sp|Q6Z7K5|MTP3_ORYSJ | Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 | 47 | 357 | 2.0E-61 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9LDU0|MTP7_ORYSJ | Metal tolerance protein 7 OS=Oryza sativa subsp. japonica GN=MTP7 PE=2 SV=1 | 26 | 357 | 1.0E-65 |
sp|Q10PP8|MTP4_ORYSJ | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1 | 13 | 352 | 4.0E-64 |
sp|Q0WU02|MTP10_ARATH | Metal tolerance protein 10 OS=Arabidopsis thaliana GN=MTP10 PE=2 SV=1 | 29 | 357 | 1.0E-63 |
sp|Q9SAJ7|MTP9_ARATH | Metal tolerance protein 9 OS=Arabidopsis thaliana GN=MTP9 PE=2 SV=2 | 29 | 357 | 7.0E-63 |
sp|Q6Z7K5|MTP3_ORYSJ | Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 | 47 | 357 | 2.0E-61 |
sp|Q5NA18|MTP5_ORYSJ | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1 | 31 | 362 | 2.0E-57 |
sp|Q9M2P2|MTPC3_ARATH | Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2 | 80 | 350 | 1.0E-56 |
sp|O80632|MTP11_ARATH | Metal tolerance protein 11 OS=Arabidopsis thaliana GN=MTP11 PE=2 SV=1 | 32 | 350 | 2.0E-55 |
sp|Q0DHJ5|MTP6_ORYSJ | Metal tolerance protein 6 OS=Oryza sativa subsp. japonica GN=MTP6 PE=2 SV=2 | 22 | 351 | 7.0E-40 |
sp|Q57891|Y449_METJA | Uncharacterized transporter MJ0449 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0449 PE=3 SV=1 | 96 | 345 | 1.0E-10 |
sp|B1JQU5|FIEF_YERPY | Cation-efflux pump FieF OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=fieF PE=3 SV=1 | 83 | 331 | 2.0E-08 |
sp|Q1C296|FIEF_YERPA | Cation-efflux pump FieF OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fieF PE=3 SV=1 | 83 | 331 | 2.0E-08 |
sp|B2JZA2|FIEF_YERPB | Cation-efflux pump FieF OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=fieF PE=3 SV=1 | 83 | 331 | 2.0E-08 |
sp|Q8ZJL7|FIEF_YERPE | Cation-efflux pump FieF OS=Yersinia pestis GN=fieF PE=3 SV=1 | 83 | 331 | 2.0E-08 |
sp|A9R6A2|FIEF_YERPG | Cation-efflux pump FieF OS=Yersinia pestis bv. Antiqua (strain Angola) GN=fieF PE=3 SV=1 | 83 | 331 | 2.0E-08 |
sp|Q1CD32|FIEF_YERPN | Cation-efflux pump FieF OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fieF PE=3 SV=1 | 83 | 331 | 2.0E-08 |
sp|A4TSA8|FIEF_YERPP | Cation-efflux pump FieF OS=Yersinia pestis (strain Pestoides F) GN=fieF PE=3 SV=1 | 83 | 331 | 2.0E-08 |
sp|Q66GA9|FIEF_YERPS | Cation-efflux pump FieF OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=fieF PE=3 SV=1 | 83 | 331 | 2.0E-08 |
sp|P21559|P34_RICRS | Protein p34 OS=Rickettsia rickettsii (strain Sheila Smith) GN=p34 PE=3 SV=1 | 60 | 327 | 6.0E-08 |
sp|C0SP78|YDFM_BACSU | Uncharacterized transporter YdfM OS=Bacillus subtilis (strain 168) GN=ydfM PE=3 SV=1 | 76 | 345 | 6.0E-08 |
sp|A1JHZ2|FIEF_YERE8 | Cation-efflux pump FieF OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) GN=fieF PE=3 SV=1 | 69 | 331 | 4.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0055085 | transmembrane transport | Yes |
GO:0006812 | cation transport | Yes |
GO:0008324 | cation transmembrane transporter activity | Yes |
GO:0015075 | ion transmembrane transporter activity | No |
GO:0006810 | transport | No |
GO:0051179 | localization | No |
GO:0003674 | molecular_function | No |
GO:0005575 | cellular_component | No |
GO:0005215 | transporter activity | No |
GO:0008150 | biological_process | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0110165 | cellular anatomical entity | No |
GO:0022857 | transmembrane transporter activity | No |
GO:0051234 | establishment of localization | No |
GO:0009987 | cellular process | No |
GO:0006811 | ion transport | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Endoplasmic reticulum|Lysosome/Vacuole | Signal peptide|Transmembrane domain | 0.1361 | 0.1498 | 0.1165 | 0.1185 | 0.0953 | 0.0557 | 0.6945 | 0.5751 | 0.5173 | 0.3996 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 71 | 93 | 22 |
2 | 97 | 119 | 22 |
3 | 140 | 162 | 22 |
4 | 177 | 199 | 22 |
5 | 235 | 257 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 260 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|7004 MTSISADHAPTLLDPDLLRRARLGDGVARRQGPVRKFYSRQDRLIDDYLRVEDEERVASDEEARLRPRIRFAVYG SFIVNVGLFAIQLYAAVSTGSLSLFATAADAFMDLVSSSVMVITSRLARRPSIYRFPVGRTRIEPVGIIVFCALM ATVSVELMIESARTLGQGHRDPAPLQPLPLALVGVAILSKSSLMVYCFFYRRFPSVRVFFLDHRNDIVVNVFGLI MSIAGDRFAWYLDPIGAICIALLILCSWSSSAFEQAGLLAGKSAPRAYISKLIYVTLTHSSHILKVDTCRAYHAG QNYYVEVDVVMDAETPLLISHDVGQSLQRKLEGLADVERAFVHIDYEHEHNIYEEHKPLYEKTESRSFRDRIRFC KAAMFPRDA |
Coding | >Ophio5|7004 ATGACGTCCATCTCAGCGGATCACGCCCCGACGCTCCTCGATCCGGATCTCCTCCGCCGGGCTCGTCTCGGTGAT GGTGTCGCCCGTCGCCAGGGCCCCGTTCGGAAGTTCTACTCGCGTCAGGATCGGCTTATTGATGACTATCTTCGT GTGGAGGATGAGGAGCGGGTCGCGTCGGATGAGGAGGCTCGGCTTAGGCCGCGCATACGCTTTGCTGTCTACGGC TCTTTCATCGTCAACGTCGGCCTTTTTGCTATACAGCTGTATGCTGCTGTTTCGACGGGCTCGCTGTCTCTCTTT GCTACGGCTGCGGATGCCTTCATGGACCTCGTTTCGTCGTCTGTCATGGTCATTACTTCGCGTCTTGCTCGTCGA CCGAGCATCTACCGCTTCCCTGTTGGCCGCACCCGTATCGAACCCGTCGGCATCATCGTCTTCTGTGCTCTCATG GCCACCGTCTCCGTCGAGCTCATGATCGAATCCGCCCGGACCCTCGGCCAAGGCCACCGCGATCCTGCTCCCCTG CAGCCCCTACCGCTGGCCCTCGTCGGCGTCGCCATCTTGTCCAAGAGTTCGCTGATGGTCTACTGCTTCTTCTAC CGCCGCTTCCCCTCCGTCCGTGTCTTCTTCCTCGACCACCGCAACGACATTGTAGTCAACGTCTTCGGTCTCATC ATGTCCATTGCCGGCGATCGCTTCGCCTGGTATCTCGATCCTATCGGCGCCATCTGCATCGCCCTTCTCATTCTC TGCTCTTGGTCGTCCAGTGCCTTTGAGCAGGCTGGTCTACTTGCTGGCAAGAGTGCGCCGAGGGCGTACATCTCC AAGCTCATCTACGTGACCCTGACGCATAGCAGCCACATCCTCAAGGTCGATACGTGCCGCGCCTATCACGCCGGA CAAAACTACTACGTCGAGGTCGACGTAGTCATGGACGCGGAGACGCCCCTCCTCATCTCCCACGACGTCGGCCAG TCGCTGCAGCGGAAGCTCGAGGGGCTGGCCGACGTAGAGAGGGCTTTCGTCCACATTGACTACGAGCACGAGCAT AACATCTACGAGGAGCACAAGCCGCTCTACGAGAAGACCGAGTCGAGGAGTTTCAGGGACCGGATACGCTTCTGC AAAGCGGCCATGTTCCCACGTGACGCC |
Transcript | >Ophio5|7004 ATGACGTCCATCTCAGCGGATCACGCCCCGACGCTCCTCGATCCGGATCTCCTCCGCCGGGCTCGTCTCGGTGAT GGTGTCGCCCGTCGCCAGGGCCCCGTTCGGAAGTTCTACTCGCGTCAGGATCGGCTTATTGATGACTATCTTCGT GTGGAGGATGAGGAGCGGGTCGCGTCGGATGAGGAGGCTCGGCTTAGGCCGCGCATACGCTTTGCTGTCTACGGC TCTTTCATCGTCAACGTCGGCCTTTTTGCTATACAGCTGTATGCTGCTGTTTCGACGGGCTCGCTGTCTCTCTTT GCTACGGCTGCGGATGCCTTCATGGACCTCGTTTCGTCGTCTGTCATGGTCATTACTTCGCGTCTTGCTCGTCGA CCGAGCATCTACCGCTTCCCTGTTGGCCGCACCCGTATCGAACCCGTCGGCATCATCGTCTTCTGTGCTCTCATG GCCACCGTCTCCGTCGAGCTCATGATCGAATCCGCCCGGACCCTCGGCCAAGGCCACCGCGATCCTGCTCCCCTG CAGCCCCTACCGCTGGCCCTCGTCGGCGTCGCCATCTTGTCCAAGAGTTCGCTGATGGTCTACTGCTTCTTCTAC CGCCGCTTCCCCTCCGTCCGTGTCTTCTTCCTCGACCACCGCAACGACATTGTAGTCAACGTCTTCGGTCTCATC ATGTCCATTGCCGGCGATCGCTTCGCCTGGTATCTCGATCCTATCGGCGCCATCTGCATCGCCCTTCTCATTCTC TGCTCTTGGTCGTCCAGTGCCTTTGAGCAGGCTGGTCTACTTGCTGGCAAGAGTGCGCCGAGGGCGTACATCTCC AAGCTCATCTACGTGACCCTGACGCATAGCAGCCACATCCTCAAGGTCGATACGTGCCGCGCCTATCACGCCGGA CAAAACTACTACGTCGAGGTCGACGTAGTCATGGACGCGGAGACGCCCCTCCTCATCTCCCACGACGTCGGCCAG TCGCTGCAGCGGAAGCTCGAGGGGCTGGCCGACGTAGAGAGGGCTTTCGTCCACATTGACTACGAGCACGAGCAT AACATCTACGAGGAGCACAAGCCGCTCTACGAGAAGACCGAGTCGAGGAGTTTCAGGGACCGGATACGCTTCTGC AAAGCGGCCATGTTCCCACGTGACGCCTGA |
Gene | >Ophio5|7004 ATGACGTCCATCTCAGCGGATCACGCCCCGACGCTCCTCGATCCGGATCTCCTCCGCCGGGCTCGTCTCGGTGAT GGTGTCGCCCGTCGCCAGGGCCCCGTTCGGAAGTTCTACTCGCGTCAGGATCGGCTTATTGATGACTATCTTCGT GTGGAGGATGAGGAGCGGGTCGCGTCGGATGAGGAGGCTCGGCTTAGGCCGCGCATACGCTTTGCTGTCTACGGC TCTTTCATCGTCAACGTCGGCCTTTTTGCTATACAGCTGTATGCTGCTGTTTCGACGGGCTCGCTGTCTGTAGGT GGCTCGTTGTCGTGTCCTCTTTTTTTTTGTGTGCTGATGTCGTTGTAAGCTCTTTGCTACGGCTGCGGATGCCTT CATGGACCTCGTTTCGTCGTCTGTCATGGTCATTACTTCGCGTCTTGCTCGTCGACCGAGCATCTACCGCTTCCC TGTTGTCAGTGTCTTTTTCTCTACGAGAGCACACACACGCAGCTTCTTCTGACGCTCTCCTCCAGGGCCGCACCC GTATCGAACCCGTCGGCATCATCGTCTTCTGTGCTCTCATGGCCACCGTCTCCGTCGAGCTCATGGTAAAAGAGG CTCTTCCCGTCTCTCACCAATTTCATCTGCTCACCTGACAGATCGAATCCGCCCGGACCCTCGGCCAAGGCCACC GCGATCCTGCTCCCCTGCAGCCCCTACCGCTGGCCCTCGTCGGCGTCGCCAGTACGTGTCTTAGGGTTACCCGAC CTTCCTCCTCCCCACTGACGCCCGCTGGCCGCAGTCTTGTCCAAGAGTTCGCTGATGGTCTACTGCTTCTTCTAC CGCCGCTTCCCCTCCGTCCGTGTCTTCTTCCTCGACCACCGCAACGACATTGTAGTCAACGTCTTCGGTCTCATC ATGTCCATTGCCGGCGATCGCTTCGCCTGGTATCTCGATCCTATCGGCGCCATCTGCATCGCCCTTCTCATTCTC TGCTCTTGGTCGTCCAGTGCCTTTGAGCAGGCTGGTCTACTTGCTGGCAAGAGTGCGCCGAGGGCGTACATCTCC AAGCTCATCTACGTGACCCTGACGCATAGCAGCCACATCCTCAAGGTCGATACGGTCAGTCTTGGTTGCCTCGAT GCCGGCCTCTCTCCTCTAACCCCCATTTTTTCCCTCGTCCCAGTGCCGCGCCTATCACGCCGGACAAAACTACTA CGTCGAGGTCGACGTAGTCATGGACGCGGAGACGCCCCTCCTCATCTCCCACGACGTCGGCCAGTCGCTGCAGCG GAAGCTCGAGGGGCTGGCCGACGTAGAGAGGGCTTTCGTCCACATTGACTACGAGCACGAGCATAACATCTACGA GGAGCACAAGCCGCTCTACGAGAAGACCGAGTCGAGGAGTTTCAGGGACCGGATACGCTTCTGCAAAGCGGCCAT GTTCCCACGTGACGCCTGA |