Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|7002
Gene name
Location	scaffold_643:6803..8022
Strand	-
Gene length (bp)	1219
Transcript length (bp)	915
Coding sequence length (bp)	912
Protein length (aa)	304

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 30	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	54	76	22
2	89	106	17
3	238	257	19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|7002 MSKSSLAQEAVLSPRGNRAGVAVRRLLPEETDIDHAPGVFFFAGSLNTSSLLHSALIIIIIIIIIIIIIIIIIVP GPLTCLVSRNMRRHGLFRAVAALLLVPVLLAREADDGLAAAEKGRPPRKLSMPMTRLDRCASLGCLWTGLVHDMA RAAWRLGGDLDELKDFIVHALDDAPPTPNDDGDYVEWHDGAETKDEADGHDEVGIRVGPMTATPDDMRESADDAG DGGYSPYPRQPPLLMAIGLAALALGLFSLWGIHCLHRHTVRLCPEDESFPSTWSPGPSRHRCKTVPAPEETFVKT GNDW
Coding	>Ophio5\|7002 ATGAGCAAAAGTTCCCTGGCCCAAGAGGCTGTGCTGTCCCCCAGGGGAAATCGCGCTGGTGTCGCTGTGAGACGC CTGTTGCCTGAAGAGACAGACATTGATCATGCACCAGGTGTTTTTTTTTTTGCGGGCAGCCTGAACACGTCCAGT CTCCTTCACAGTGCTCTAATCATCATCATCATCATCATCATCATCATTATCATCATCATCATCATCATCGTCCCT GGGCCTCTAACCTGCCTTGTTTCTCGGAACATGCGTCGCCACGGCCTCTTCCGAGCCGTTGCCGCGCTCCTCCTA GTGCCGGTGTTACTGGCGAGGGAAGCCGACGATGGCCTCGCCGCCGCAGAAAAGGGTCGTCCGCCCAGAAAGCTT TCCATGCCAATGACGCGACTGGACCGCTGCGCAAGCCTCGGCTGCTTATGGACTGGACTGGTGCACGACATGGCA AGGGCCGCGTGGAGGTTGGGCGGCGACCTGGATGAGCTCAAAGACTTCATCGTCCACGCGCTCGACGACGCACCG CCAACGCCAAATGATGATGGGGACTATGTCGAATGGCACGACGGGGCGGAGACGAAGGACGAAGCAGACGGGCAC GATGAGGTCGGGATACGGGTCGGACCCATGACCGCGACGCCGGACGACATGCGGGAATCGGCGGATGACGCCGGC GACGGCGGATACTCGCCTTATCCGCGCCAGCCACCGCTTCTCATGGCCATCGGCCTGGCTGCTCTGGCGCTTGGC CTCTTCTCCCTCTGGGGCATCCATTGCCTCCACCGCCACACTGTGCGTCTTTGTCCGGAGGACGAGTCATTTCCT AGCACATGGAGCCCAGGACCCTCTCGCCATCGCTGCAAGACGGTCCCCGCCCCTGAGGAAACCTTTGTGAAGACA GGCAACGACTGG
Transcript	>Ophio5\|7002 ATGAGCAAAAGTTCCCTGGCCCAAGAGGCTGTGCTGTCCCCCAGGGGAAATCGCGCTGGTGTCGCTGTGAGACGC CTGTTGCCTGAAGAGACAGACATTGATCATGCACCAGGTGTTTTTTTTTTTGCGGGCAGCCTGAACACGTCCAGT CTCCTTCACAGTGCTCTAATCATCATCATCATCATCATCATCATCATTATCATCATCATCATCATCATCGTCCCT GGGCCTCTAACCTGCCTTGTTTCTCGGAACATGCGTCGCCACGGCCTCTTCCGAGCCGTTGCCGCGCTCCTCCTA GTGCCGGTGTTACTGGCGAGGGAAGCCGACGATGGCCTCGCCGCCGCAGAAAAGGGTCGTCCGCCCAGAAAGCTT TCCATGCCAATGACGCGACTGGACCGCTGCGCAAGCCTCGGCTGCTTATGGACTGGACTGGTGCACGACATGGCA AGGGCCGCGTGGAGGTTGGGCGGCGACCTGGATGAGCTCAAAGACTTCATCGTCCACGCGCTCGACGACGCACCG CCAACGCCAAATGATGATGGGGACTATGTCGAATGGCACGACGGGGCGGAGACGAAGGACGAAGCAGACGGGCAC GATGAGGTCGGGATACGGGTCGGACCCATGACCGCGACGCCGGACGACATGCGGGAATCGGCGGATGACGCCGGC GACGGCGGATACTCGCCTTATCCGCGCCAGCCACCGCTTCTCATGGCCATCGGCCTGGCTGCTCTGGCGCTTGGC CTCTTCTCCCTCTGGGGCATCCATTGCCTCCACCGCCACACTGTGCGTCTTTGTCCGGAGGACGAGTCATTTCCT AGCACATGGAGCCCAGGACCCTCTCGCCATCGCTGCAAGACGGTCCCCGCCCCTGAGGAAACCTTTGTGAAGACA GGCAACGACTGGTGA
Gene	>Ophio5\|7002 ATGAGCAAAAGTTCCCTGGCCCAAGAGGCTGTGCTGTCGTTGGCAGGGCCGGACAGGAAGACGAGGTCCCCCCCC CTTTCGGCCGGGTCACAGCCCCAGGGGAAATCGCGCTGGTGTCGCTGTGAGGTCAGTCATTGCTTACCTGCTAAC CACTTTGTCTGCGCCAACAGAGGCCCGAGTGTAGCCTTGCTGACGGGTGACTGGATAGACGCCTGTTGCCTGAAG AGACAGACATTGATCATGCACCAGGTGTTTTTTTTTTTGCGGGCAGCCTGAACACGTCCAGTCTCCTTCACAGTG CTCTAATCATCATCATCATCATCATCATCATCATTATCATCATCATCATCATCATCGTCCCTGGGCCTCTAACCT GCCTTGTTTCTCGGAACATGCGTCGCCACGGCCTCTTCCGAGCCGTTGCCGCGCTCCTCCTAGTGCCGGTGTTAC TGGCGAGGTCAGTCCCTCGCCAAGGCCATGGTCGCACGCCCATCGCTGAGCTCAGACGATCAACTCCTATCGGTG TACGATACAGGGAAGCCGACGATGGCCTCGCCGCCGCAGAAAAGGGTCGTCCGCCCAGAAAGCTTTCCATGCCAA TGACGCGACTGGACCGCTGCGCAAGCCTCGGCTGCTTATGGACTGGACTGGTGCACGACATGGCAAGGGCCGCGT GGAGGTTGGGCGGCGACCTGGATGAGCTCAAAGACTTCATCGTCCACGCGCTCGACGACGCACCGCCAACGCCAA ATGATGATGGGGACTATGTCGAATGGCACGACGGGGCGGAGACGAAGGACGAAGCAGACGGGCACGATGAGGTCG GGATACGGGTCGGACCCATGACCGCGACGCCGGACGACATGCGGGAATCGGCGGATGACGCCGGCGACGGCGGAT ACTCGCCTTATCCGCGCCAGCCACCGGTTTGTTCCCCTCTTCACCAGACTCGAGGTGGCGAGGCCTCGGTAGCAA GAGCCATTGAGGAGCTGACTTGGTTCACACCTCCTTTAAGCTTCTCATGGCCATCGGCCTGGCTGCTCTGGCGCT TGGCCTCTTCTCCCTCTGGGGCATCCATTGCCTCCACCGCCACACTGTGCGTCTTTGTCCGGAGGACGAGTCATT TCCTAGCACATGGAGCCCAGGACCCTCTCGCCATCGCTGCAAGACGGTCCCCGCCCCTGAGGAAACCTTTGTGAA GACAGGCAACGACTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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