Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|7000
Gene name
Location	scaffold_643:2990..3818
Strand	-
Gene length (bp)	828
Transcript length (bp)	828
Coding sequence length (bp)	825
Protein length (aa)	275

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	15	37	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|7000 MALINPVQTLFVPFLFVAMIPLAVFAGITTTLAFSVLGFRVIAVYLDIALSLMPQCFSSSESPPVVTASSSSPSS LGANHQQSRHRSLSPATSSSTHSVDNSPTTPTQQHLLHLHLHQAQSVPRRHRRRPSSLTSVVSAGSITPGGGMAM GLMPSVGPDRDFEGVGGWRDDRGGNDDTWTTINSRFELPDRVYARNHHRSPSGGAVTPGDTGVLMMKARARSPAP AEARITPSPNSSRARTPSASRMSVMNMGASDGYFSLTMSPTASKKPSMMM
Coding	>Ophio5\|7000 ATGGCTCTCATCAATCCCGTCCAGACGCTCTTCGTCCCCTTTCTCTTCGTTGCCATGATACCGCTCGCCGTCTTT GCCGGAATCACTACTACGCTCGCCTTCTCCGTCCTCGGCTTCCGCGTCATCGCCGTCTACCTGGACATTGCTCTG TCGCTCATGCCCCAGTGCTTCTCCAGCTCTGAATCGCCTCCCGTCGTCACCGCCTCCTCCTCTTCTCCCTCCTCG CTGGGCGCTAATCATCAGCAAAGTCGTCATCGGTCTCTCTCGCCAGCCACCAGCAGCAGCACTCACAGCGTTGAC AACAGCCCGACGACACCCACTCAACAACACCTCCTTCACCTTCACCTCCACCAAGCCCAGTCCGTGCCTCGCCGT CACCGTCGCCGGCCCAGCAGCCTCACCAGCGTCGTCTCCGCCGGTTCCATTACTCCCGGCGGGGGCATGGCCATG GGACTCATGCCCAGCGTCGGCCCGGATCGCGACTTCGAAGGCGTCGGTGGCTGGCGCGATGATCGCGGCGGCAAC GACGACACCTGGACCACCATCAACTCCCGCTTCGAGCTACCGGATCGCGTTTACGCCCGTAACCACCACCGCTCC CCGTCCGGCGGGGCCGTCACCCCGGGCGACACCGGCGTCCTCATGATGAAGGCACGCGCGCGTAGCCCGGCTCCG GCCGAGGCCAGGATCACGCCGTCTCCCAACAGCTCCCGCGCCAGGACGCCGTCGGCTTCCCGCATGAGCGTCATG AACATGGGCGCCAGCGACGGTTACTTTTCTCTTACCATGTCGCCCACGGCCAGTAAAAAGCCATCCATGATGATG
Transcript	>Ophio5\|7000 ATGGCTCTCATCAATCCCGTCCAGACGCTCTTCGTCCCCTTTCTCTTCGTTGCCATGATACCGCTCGCCGTCTTT GCCGGAATCACTACTACGCTCGCCTTCTCCGTCCTCGGCTTCCGCGTCATCGCCGTCTACCTGGACATTGCTCTG TCGCTCATGCCCCAGTGCTTCTCCAGCTCTGAATCGCCTCCCGTCGTCACCGCCTCCTCCTCTTCTCCCTCCTCG CTGGGCGCTAATCATCAGCAAAGTCGTCATCGGTCTCTCTCGCCAGCCACCAGCAGCAGCACTCACAGCGTTGAC AACAGCCCGACGACACCCACTCAACAACACCTCCTTCACCTTCACCTCCACCAAGCCCAGTCCGTGCCTCGCCGT CACCGTCGCCGGCCCAGCAGCCTCACCAGCGTCGTCTCCGCCGGTTCCATTACTCCCGGCGGGGGCATGGCCATG GGACTCATGCCCAGCGTCGGCCCGGATCGCGACTTCGAAGGCGTCGGTGGCTGGCGCGATGATCGCGGCGGCAAC GACGACACCTGGACCACCATCAACTCCCGCTTCGAGCTACCGGATCGCGTTTACGCCCGTAACCACCACCGCTCC CCGTCCGGCGGGGCCGTCACCCCGGGCGACACCGGCGTCCTCATGATGAAGGCACGCGCGCGTAGCCCGGCTCCG GCCGAGGCCAGGATCACGCCGTCTCCCAACAGCTCCCGCGCCAGGACGCCGTCGGCTTCCCGCATGAGCGTCATG AACATGGGCGCCAGCGACGGTTACTTTTCTCTTACCATGTCGCCCACGGCCAGTAAAAAGCCATCCATGATGATG TGA
Gene	>Ophio5\|7000 ATGGCTCTCATCAATCCCGTCCAGACGCTCTTCGTCCCCTTTCTCTTCGTTGCCATGATACCGCTCGCCGTCTTT GCCGGAATCACTACTACGCTCGCCTTCTCCGTCCTCGGCTTCCGCGTCATCGCCGTCTACCTGGACATTGCTCTG TCGCTCATGCCCCAGTGCTTCTCCAGCTCTGAATCGCCTCCCGTCGTCACCGCCTCCTCCTCTTCTCCCTCCTCG CTGGGCGCTAATCATCAGCAAAGTCGTCATCGGTCTCTCTCGCCAGCCACCAGCAGCAGCACTCACAGCGTTGAC AACAGCCCGACGACACCCACTCAACAACACCTCCTTCACCTTCACCTCCACCAAGCCCAGTCCGTGCCTCGCCGT CACCGTCGCCGGCCCAGCAGCCTCACCAGCGTCGTCTCCGCCGGTTCCATTACTCCCGGCGGGGGCATGGCCATG GGACTCATGCCCAGCGTCGGCCCGGATCGCGACTTCGAAGGCGTCGGTGGCTGGCGCGATGATCGCGGCGGCAAC GACGACACCTGGACCACCATCAACTCCCGCTTCGAGCTACCGGATCGCGTTTACGCCCGTAACCACCACCGCTCC CCGTCCGGCGGGGCCGTCACCCCGGGCGACACCGGCGTCCTCATGATGAAGGCACGCGCGCGTAGCCCGGCTCCG GCCGAGGCCAGGATCACGCCGTCTCCCAACAGCTCCCGCGCCAGGACGCCGTCGGCTTCCCGCATGAGCGTCATG AACATGGGCGCCAGCGACGGTTACTTTTCTCTTACCATGTCGCCCACGGCCAGTAAAAAGCCATCCATGATGATG TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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