Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|7
Gene name
Location	scaffold_1:13656..14766
Strand	-
Gene length (bp)	1110
Transcript length (bp)	984
Coding sequence length (bp)	981
Protein length (aa)	327

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05704	Caps_synth	Capsular polysaccharide synthesis protein	1.8E-06	59	163

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0016757	glycosyltransferase activity	Yes
GO:0003824	catalytic activity	No
GO:0016740	transferase activity	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 24	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|7 MDYPTYPLPEGVRHPHHPRAVRAWHRRFARQGWVVRVVDRKPGSPLNVANFLDINDPQTFPQAFINGTIDGAYAA QHTSDLVRWPLLLRYGGVYADVGLMQIGDLDRLWNMTVGDPNSPFDVVSYNIGDADERSLTNYFLAAGRDNPLFA RCHRLLLALWAGRTNTDGLHASPLLEGVPLMDGRGLSFTEGEKTYGPDDISRMLTDYIVQGQAMSLVMGLVDDDD GWHGPKYVAEHVYAMHYTPGSQLINDMTAWKGPRQFELMSLQLPRAGQDESEDQILARRIVEACLRTSFGFKLAH GLILRVMGDTLGSLWRKHEGADEVPGT
Coding	>Ophio5\|7 ATGGACTATCCTACGTATCCGCTGCCCGAGGGCGTACGGCACCCTCACCACCCCCGAGCCGTCCGCGCCTGGCAT CGTCGCTTCGCTCGACAGGGCTGGGTGGTGCGTGTCGTTGATCGCAAGCCTGGCTCGCCTCTCAACGTAGCCAAC TTTCTCGACATCAATGACCCGCAGACATTCCCGCAGGCTTTCATCAATGGTACTATTGACGGTGCCTACGCTGCC CAGCACACGTCGGATCTTGTTCGGTGGCCGCTGCTGCTCCGCTACGGCGGCGTCTATGCCGACGTCGGCCTGATG CAGATCGGCGACCTGGACCGGCTCTGGAACATGACGGTTGGCGACCCCAATTCGCCCTTCGACGTGGTTTCATAC AACATTGGCGATGCCGACGAACGCAGCTTGACCAACTACTTTCTCGCCGCCGGCCGCGACAACCCTCTCTTCGCC CGCTGCCATCGACTCCTGCTTGCGCTGTGGGCTGGCAGGACTAACACGGACGGATTACACGCCAGCCCGCTTCTT GAGGGCGTGCCGCTCATGGATGGGCGCGGCTTATCCTTTACCGAAGGGGAAAAGACGTACGGGCCAGACGACATC AGCCGCATGCTGACCGACTACATCGTCCAAGGCCAGGCCATGAGCCTCGTTATGGGTCTCGTCGACGATGACGAC GGCTGGCATGGGCCCAAGTACGTGGCCGAGCACGTCTATGCCATGCACTACACACCGGGCTCCCAGCTCATCAAC GACATGACGGCGTGGAAAGGCCCCAGACAGTTTGAGCTCATGTCGTTGCAACTGCCACGCGCCGGCCAAGACGAG AGCGAAGACCAGATACTGGCGCGCCGGATTGTCGAGGCGTGTTTGCGGACCAGCTTCGGCTTCAAGCTGGCGCAC GGCCTGATACTGAGGGTCATGGGCGACACGCTGGGATCATTATGGCGGAAACACGAAGGCGCCGACGAAGTCCCA GGCACC
Transcript	>Ophio5\|7 ATGGACTATCCTACGTATCCGCTGCCCGAGGGCGTACGGCACCCTCACCACCCCCGAGCCGTCCGCGCCTGGCAT CGTCGCTTCGCTCGACAGGGCTGGGTGGTGCGTGTCGTTGATCGCAAGCCTGGCTCGCCTCTCAACGTAGCCAAC TTTCTCGACATCAATGACCCGCAGACATTCCCGCAGGCTTTCATCAATGGTACTATTGACGGTGCCTACGCTGCC CAGCACACGTCGGATCTTGTTCGGTGGCCGCTGCTGCTCCGCTACGGCGGCGTCTATGCCGACGTCGGCCTGATG CAGATCGGCGACCTGGACCGGCTCTGGAACATGACGGTTGGCGACCCCAATTCGCCCTTCGACGTGGTTTCATAC AACATTGGCGATGCCGACGAACGCAGCTTGACCAACTACTTTCTCGCCGCCGGCCGCGACAACCCTCTCTTCGCC CGCTGCCATCGACTCCTGCTTGCGCTGTGGGCTGGCAGGACTAACACGGACGGATTACACGCCAGCCCGCTTCTT GAGGGCGTGCCGCTCATGGATGGGCGCGGCTTATCCTTTACCGAAGGGGAAAAGACGTACGGGCCAGACGACATC AGCCGCATGCTGACCGACTACATCGTCCAAGGCCAGGCCATGAGCCTCGTTATGGGTCTCGTCGACGATGACGAC GGCTGGCATGGGCCCAAGTACGTGGCCGAGCACGTCTATGCCATGCACTACACACCGGGCTCCCAGCTCATCAAC GACATGACGGCGTGGAAAGGCCCCAGACAGTTTGAGCTCATGTCGTTGCAACTGCCACGCGCCGGCCAAGACGAG AGCGAAGACCAGATACTGGCGCGCCGGATTGTCGAGGCGTGTTTGCGGACCAGCTTCGGCTTCAAGCTGGCGCAC GGCCTGATACTGAGGGTCATGGGCGACACGCTGGGATCATTATGGCGGAAACACGAAGGCGCCGACGAAGTCCCA GGCACCTAA
Gene	>Ophio5\|7 ATGGACTATCCTACGTATCCGCTGCCCGAGGGCGTGTACGCCATCCCCTCTGAGCAGCTGGACCTCCGGTCTGAC GCCGACATAGACGGCACCCTCACCACCCCCGAGCCGGTACGCGACGAAAAGAACATCTGGTTCTTTTGGGACGGC AGCTTCGCTCATATGCACCCCTACGCGAAACGGACAGTCCGCGCCTGGCATCGTCGCTTCGCTCGACAGGGCTGG GTGGTGCGTGTCGTTGATCGCAAGCCTGGCTCGCCTCTCAACGTAGCCAACTTTCTCGACATCAATGACCCGCAG ACATTCCCGCAGGCTTTCATCAATGGTACTATTGACGGTGCCTACGCTGCCCAGCACACGTCGGATCTTGTTCGG TGGCCGCTGCTGCTCCGCTACGGCGGCGTCTATGCCGACGTCGGCCTGATGCAGATCGGCGACCTGGACCGGCTC TGGAACATGACGGTTGGCGACCCCAATTCGCCCTTCGACGTGGTTTCATACAACATTGGCGATGCCGACGAACGC AGCTTGACCAACTACTTTCTCGCCGCCGGCCGCGACAACCCTCTCTTCGCCCGCTGCCATCGACTCCTGCTTGCG CTGTGGGCTGGCAGGACTAACACGGACGGATTACACGCCAGCCCGCTTCTTGAGGGCGTGCCGCTCATGGATGGG CGCGGCTTATCCTTTACCGAAGGGGAAAAGACGTACGGGCCAGACGACATCAGCCGCATGCTGACCGACTACATC GTCCAAGGCCAGGCCATGAGCCTCGTTATGGGTCTCGTCGACGATGACGACGGCTGGCATGGGCCCAAGTACGTG GCCGAGCACGTCTATGCCATGCACTACACACCGGGCTCCCAGCTCATCAACGACATGACGGCGTGGAAAGGCCCC AGACAGTTTGAGCTCATGTCGTTGCAACTGCCACGCGCCGGCCAAGACGAGAGCGAAGACCAGATACTGGCGCGC CGGATTGTCGAGGCGTGTTTGCGGACCAGCTTCGGCTTCAAGCTGGCGCACGGCCTGATACTGAGGGTCATGGGC GACACGCTGGGATCATTATGGCGGAAACACGAAGGCGCCGACGAAGTCCCAGGCACCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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