Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7
Gene name
Locationscaffold_1:13656..14766
Strand-
Gene length (bp)1110
Transcript length (bp)984
Coding sequence length (bp)981
Protein length (aa) 327

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05704 Caps_synth Capsular polysaccharide synthesis protein 1.8E-06 59 163

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016757 glycosyltransferase activity Yes
GO:0003824 catalytic activity No
GO:0016740 transferase activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7
MDYPTYPLPEGVRHPHHPRAVRAWHRRFARQGWVVRVVDRKPGSPLNVANFLDINDPQTFPQAFINGTIDGAYAA
QHTSDLVRWPLLLRYGGVYADVGLMQIGDLDRLWNMTVGDPNSPFDVVSYNIGDADERSLTNYFLAAGRDNPLFA
RCHRLLLALWAGRTNTDGLHASPLLEGVPLMDGRGLSFTEGEKTYGPDDISRMLTDYIVQGQAMSLVMGLVDDDD
GWHGPKYVAEHVYAMHYTPGSQLINDMTAWKGPRQFELMSLQLPRAGQDESEDQILARRIVEACLRTSFGFKLAH
GLILRVMGDTLGSLWRKHEGADEVPGT
Coding >Ophio5|7
ATGGACTATCCTACGTATCCGCTGCCCGAGGGCGTACGGCACCCTCACCACCCCCGAGCCGTCCGCGCCTGGCAT
CGTCGCTTCGCTCGACAGGGCTGGGTGGTGCGTGTCGTTGATCGCAAGCCTGGCTCGCCTCTCAACGTAGCCAAC
TTTCTCGACATCAATGACCCGCAGACATTCCCGCAGGCTTTCATCAATGGTACTATTGACGGTGCCTACGCTGCC
CAGCACACGTCGGATCTTGTTCGGTGGCCGCTGCTGCTCCGCTACGGCGGCGTCTATGCCGACGTCGGCCTGATG
CAGATCGGCGACCTGGACCGGCTCTGGAACATGACGGTTGGCGACCCCAATTCGCCCTTCGACGTGGTTTCATAC
AACATTGGCGATGCCGACGAACGCAGCTTGACCAACTACTTTCTCGCCGCCGGCCGCGACAACCCTCTCTTCGCC
CGCTGCCATCGACTCCTGCTTGCGCTGTGGGCTGGCAGGACTAACACGGACGGATTACACGCCAGCCCGCTTCTT
GAGGGCGTGCCGCTCATGGATGGGCGCGGCTTATCCTTTACCGAAGGGGAAAAGACGTACGGGCCAGACGACATC
AGCCGCATGCTGACCGACTACATCGTCCAAGGCCAGGCCATGAGCCTCGTTATGGGTCTCGTCGACGATGACGAC
GGCTGGCATGGGCCCAAGTACGTGGCCGAGCACGTCTATGCCATGCACTACACACCGGGCTCCCAGCTCATCAAC
GACATGACGGCGTGGAAAGGCCCCAGACAGTTTGAGCTCATGTCGTTGCAACTGCCACGCGCCGGCCAAGACGAG
AGCGAAGACCAGATACTGGCGCGCCGGATTGTCGAGGCGTGTTTGCGGACCAGCTTCGGCTTCAAGCTGGCGCAC
GGCCTGATACTGAGGGTCATGGGCGACACGCTGGGATCATTATGGCGGAAACACGAAGGCGCCGACGAAGTCCCA
GGCACC
Transcript >Ophio5|7
ATGGACTATCCTACGTATCCGCTGCCCGAGGGCGTACGGCACCCTCACCACCCCCGAGCCGTCCGCGCCTGGCAT
CGTCGCTTCGCTCGACAGGGCTGGGTGGTGCGTGTCGTTGATCGCAAGCCTGGCTCGCCTCTCAACGTAGCCAAC
TTTCTCGACATCAATGACCCGCAGACATTCCCGCAGGCTTTCATCAATGGTACTATTGACGGTGCCTACGCTGCC
CAGCACACGTCGGATCTTGTTCGGTGGCCGCTGCTGCTCCGCTACGGCGGCGTCTATGCCGACGTCGGCCTGATG
CAGATCGGCGACCTGGACCGGCTCTGGAACATGACGGTTGGCGACCCCAATTCGCCCTTCGACGTGGTTTCATAC
AACATTGGCGATGCCGACGAACGCAGCTTGACCAACTACTTTCTCGCCGCCGGCCGCGACAACCCTCTCTTCGCC
CGCTGCCATCGACTCCTGCTTGCGCTGTGGGCTGGCAGGACTAACACGGACGGATTACACGCCAGCCCGCTTCTT
GAGGGCGTGCCGCTCATGGATGGGCGCGGCTTATCCTTTACCGAAGGGGAAAAGACGTACGGGCCAGACGACATC
AGCCGCATGCTGACCGACTACATCGTCCAAGGCCAGGCCATGAGCCTCGTTATGGGTCTCGTCGACGATGACGAC
GGCTGGCATGGGCCCAAGTACGTGGCCGAGCACGTCTATGCCATGCACTACACACCGGGCTCCCAGCTCATCAAC
GACATGACGGCGTGGAAAGGCCCCAGACAGTTTGAGCTCATGTCGTTGCAACTGCCACGCGCCGGCCAAGACGAG
AGCGAAGACCAGATACTGGCGCGCCGGATTGTCGAGGCGTGTTTGCGGACCAGCTTCGGCTTCAAGCTGGCGCAC
GGCCTGATACTGAGGGTCATGGGCGACACGCTGGGATCATTATGGCGGAAACACGAAGGCGCCGACGAAGTCCCA
GGCACCTAA
Gene >Ophio5|7
ATGGACTATCCTACGTATCCGCTGCCCGAGGGCGTGTACGCCATCCCCTCTGAGCAGCTGGACCTCCGGTCTGAC
GCCGACATAGACGGCACCCTCACCACCCCCGAGCCGGTACGCGACGAAAAGAACATCTGGTTCTTTTGGGACGGC
AGCTTCGCTCATATGCACCCCTACGCGAAACGGACAGTCCGCGCCTGGCATCGTCGCTTCGCTCGACAGGGCTGG
GTGGTGCGTGTCGTTGATCGCAAGCCTGGCTCGCCTCTCAACGTAGCCAACTTTCTCGACATCAATGACCCGCAG
ACATTCCCGCAGGCTTTCATCAATGGTACTATTGACGGTGCCTACGCTGCCCAGCACACGTCGGATCTTGTTCGG
TGGCCGCTGCTGCTCCGCTACGGCGGCGTCTATGCCGACGTCGGCCTGATGCAGATCGGCGACCTGGACCGGCTC
TGGAACATGACGGTTGGCGACCCCAATTCGCCCTTCGACGTGGTTTCATACAACATTGGCGATGCCGACGAACGC
AGCTTGACCAACTACTTTCTCGCCGCCGGCCGCGACAACCCTCTCTTCGCCCGCTGCCATCGACTCCTGCTTGCG
CTGTGGGCTGGCAGGACTAACACGGACGGATTACACGCCAGCCCGCTTCTTGAGGGCGTGCCGCTCATGGATGGG
CGCGGCTTATCCTTTACCGAAGGGGAAAAGACGTACGGGCCAGACGACATCAGCCGCATGCTGACCGACTACATC
GTCCAAGGCCAGGCCATGAGCCTCGTTATGGGTCTCGTCGACGATGACGACGGCTGGCATGGGCCCAAGTACGTG
GCCGAGCACGTCTATGCCATGCACTACACACCGGGCTCCCAGCTCATCAACGACATGACGGCGTGGAAAGGCCCC
AGACAGTTTGAGCTCATGTCGTTGCAACTGCCACGCGCCGGCCAAGACGAGAGCGAAGACCAGATACTGGCGCGC
CGGATTGTCGAGGCGTGTTTGCGGACCAGCTTCGGCTTCAAGCTGGCGCACGGCCTGATACTGAGGGTCATGGGC
GACACGCTGGGATCATTATGGCGGAAACACGAAGGCGCCGACGAAGTCCCAGGCACCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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