Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6974
Gene name
Locationscaffold_64:11448..13335
Strand+
Gene length (bp)1887
Transcript length (bp)1887
Coding sequence length (bp)1884
Protein length (aa) 628

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00686 CBM_20 Starch binding domain 1.1E-19 529 620

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P14804|AMYG_NEUCR Glucoamylase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=gla-1 PE=1 SV=3 495 616 8.0E-10
sp|P36914|AMYG_ASPOR Glucoamylase OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=glaA PE=2 SV=2 525 624 1.0E-09
sp|P09794|AMY_STRLM Alpha-amylase OS=Streptomyces limosus GN=aml PE=3 SV=1 531 625 8.0E-07
sp|P30270|AMY_STRGR Alpha-amylase OS=Streptomyces griseus GN=amy PE=3 SV=1 531 625 8.0E-07
sp|P0DN29|AMYG_ARTBC Glucoamylase ARB_02327-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02327-1 PE=1 SV=1 529 624 2.0E-06
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P14804|AMYG_NEUCR Glucoamylase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=gla-1 PE=1 SV=3 495 616 8.0E-10
sp|P36914|AMYG_ASPOR Glucoamylase OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=glaA PE=2 SV=2 525 624 1.0E-09
sp|P09794|AMY_STRLM Alpha-amylase OS=Streptomyces limosus GN=aml PE=3 SV=1 531 625 8.0E-07
sp|P30270|AMY_STRGR Alpha-amylase OS=Streptomyces griseus GN=amy PE=3 SV=1 531 625 8.0E-07
sp|P0DN29|AMYG_ARTBC Glucoamylase ARB_02327-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02327-1 PE=1 SV=1 529 624 2.0E-06
sp|P23176|AMYG_ASPKA Glucoamylase I OS=Aspergillus kawachii GN=gaI PE=1 SV=1 530 624 2.0E-06
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GO

GO Term Description Terminal node
GO:2001070 starch binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No
GO:0030246 carbohydrate binding No
GO:0030247 polysaccharide binding No

SignalP

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SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6974
MRLAALAVFAAALAPGVSASESAAAAAAAAAAIAAELQANYSIDWNKPPARERWQTELTCFDLWFKCPSIRLGYE
ERLVPVGRTEVSVYHTAHVDNALFNTAERRVALRVQSSTAIAEGVTSGWSIAARVTGGPGPLRLSMAKNEQGLGP
RQRKTTTRTKHMTRCDPRHDCRIETWTFHVKVSGTCEKKAWIECGEREDACHGPRAKAGSSCDQVNAFHDKHCNN
PASSGHQQYPCEVHYPVLTHDGHLFTRLVPISTSLRRGDRDQQQRSQAEEAVQVKGEAPSSSSNTQETGVVSEPA
IVAGKTIDGFCYVNDTHYIAGTGRYWDRLRPALGWYQVGQAAAPKPDTQSFGPCYEGPTTDPTTVGRLPQAAELA
PKDSAILPKKREICVLNDTHYYAEPDQYYNIENSDQGWYRADGAQRLDTAGFEPCFQKPATNWTAGRLARAAEPV
AKPEKKNVVVVVGKEQGHCVLNATHYYAEPDRYYNMKNPGRGWYSVAGVPAPETADFGPCEENPKVEIPRRGDGC
KPPKVTFRLLAKMRPGYAVKLVGDLQEMGNWNPEKAMPMDTSEYSEEHPVLKDAIMLKPGRFQYKYVMVGPEGQV
VWEAGEKRNLEVQGGCQVRTEDWRGGGG
Coding >Ophio5|6974
ATGCGTCTCGCCGCCCTCGCCGTTTTCGCCGCCGCCCTCGCCCCGGGCGTCTCGGCCTCGGAGTCGGCCGCCGCC
GCCGCCGCAGCAGCAGCAGCCATCGCGGCCGAGCTACAGGCCAACTACAGCATCGACTGGAACAAGCCGCCGGCG
CGAGAGCGCTGGCAGACGGAGCTGACCTGCTTCGACCTATGGTTCAAGTGTCCCTCGATACGGCTTGGCTACGAG
GAGCGGCTGGTGCCCGTTGGGCGCACCGAGGTCAGCGTCTACCACACGGCCCATGTCGACAATGCTCTCTTCAAC
ACGGCCGAGCGGCGCGTGGCGCTTCGCGTTCAAAGCTCCACGGCTATAGCTGAAGGCGTCACGAGCGGGTGGAGC
ATCGCAGCCCGCGTCACCGGCGGTCCCGGCCCCCTGAGACTGAGCATGGCGAAGAACGAGCAGGGCCTCGGCCCG
CGACAAAGAAAGACGACGACCCGTACGAAGCACATGACCCGCTGCGACCCAAGACATGACTGCCGCATCGAGACC
TGGACCTTTCACGTCAAGGTCTCCGGCACGTGCGAGAAGAAGGCTTGGATAGAGTGTGGCGAAAGGGAAGACGCC
TGCCACGGTCCGCGCGCAAAGGCCGGCTCCAGCTGCGATCAGGTAAACGCCTTCCACGACAAACACTGCAATAAT
CCTGCGAGCTCGGGTCACCAGCAGTATCCGTGCGAGGTGCACTATCCCGTCTTGACACATGACGGCCATCTCTTC
ACTCGCCTCGTGCCCATCTCGACGTCTCTCCGCCGGGGGGATCGAGATCAGCAGCAGAGGTCCCAGGCAGAAGAG
GCCGTCCAGGTCAAGGGGGAGGCGCCGTCTTCGTCGTCAAACACCCAGGAGACCGGGGTGGTGTCGGAGCCTGCG
ATTGTGGCCGGCAAGACCATAGATGGGTTCTGTTATGTCAACGACACGCACTACATCGCCGGCACTGGCAGGTAC
TGGGATCGTCTCAGGCCGGCTCTTGGCTGGTATCAGGTCGGACAGGCAGCGGCGCCGAAGCCGGACACGCAAAGC
TTCGGGCCCTGTTACGAAGGTCCGACGACGGATCCGACGACGGTAGGACGGCTTCCTCAAGCGGCCGAGCTTGCT
CCGAAAGACTCGGCCATCCTCCCAAAGAAAAGGGAAATCTGCGTCCTCAACGACACGCACTACTACGCTGAACCT
GACCAGTACTATAACATAGAGAACTCCGATCAGGGCTGGTACAGGGCCGATGGGGCCCAACGGCTAGATACGGCG
GGCTTCGAGCCGTGCTTCCAGAAGCCGGCGACGAACTGGACGGCAGGTCGACTTGCTCGAGCGGCTGAACCTGTT
GCCAAGCCGGAGAAGAAGAATGTCGTCGTCGTCGTCGGCAAGGAACAAGGGCACTGCGTGCTCAATGCGACGCAC
TACTACGCCGAACCAGACAGGTACTACAACATGAAGAATCCGGGACGGGGCTGGTATAGCGTGGCTGGGGTGCCG
GCGCCGGAGACGGCCGACTTCGGTCCGTGCGAGGAGAACCCGAAGGTGGAGATACCGAGGCGCGGCGACGGCTGC
AAGCCGCCTAAGGTGACGTTCCGCCTGCTGGCGAAGATGCGGCCGGGCTATGCGGTCAAGCTGGTTGGCGACTTG
CAGGAGATGGGCAACTGGAACCCAGAAAAGGCCATGCCCATGGACACCTCCGAGTACAGCGAGGAGCATCCAGTA
TTGAAGGACGCCATCATGTTGAAGCCCGGCCGCTTCCAGTACAAGTACGTCATGGTTGGGCCCGAAGGTCAGGTC
GTTTGGGAAGCGGGCGAGAAGCGCAATCTGGAGGTCCAGGGCGGGTGTCAGGTTCGGACGGAGGATTGGCGGGGG
GGGGGCGGA
Transcript >Ophio5|6974
ATGCGTCTCGCCGCCCTCGCCGTTTTCGCCGCCGCCCTCGCCCCGGGCGTCTCGGCCTCGGAGTCGGCCGCCGCC
GCCGCCGCAGCAGCAGCAGCCATCGCGGCCGAGCTACAGGCCAACTACAGCATCGACTGGAACAAGCCGCCGGCG
CGAGAGCGCTGGCAGACGGAGCTGACCTGCTTCGACCTATGGTTCAAGTGTCCCTCGATACGGCTTGGCTACGAG
GAGCGGCTGGTGCCCGTTGGGCGCACCGAGGTCAGCGTCTACCACACGGCCCATGTCGACAATGCTCTCTTCAAC
ACGGCCGAGCGGCGCGTGGCGCTTCGCGTTCAAAGCTCCACGGCTATAGCTGAAGGCGTCACGAGCGGGTGGAGC
ATCGCAGCCCGCGTCACCGGCGGTCCCGGCCCCCTGAGACTGAGCATGGCGAAGAACGAGCAGGGCCTCGGCCCG
CGACAAAGAAAGACGACGACCCGTACGAAGCACATGACCCGCTGCGACCCAAGACATGACTGCCGCATCGAGACC
TGGACCTTTCACGTCAAGGTCTCCGGCACGTGCGAGAAGAAGGCTTGGATAGAGTGTGGCGAAAGGGAAGACGCC
TGCCACGGTCCGCGCGCAAAGGCCGGCTCCAGCTGCGATCAGGTAAACGCCTTCCACGACAAACACTGCAATAAT
CCTGCGAGCTCGGGTCACCAGCAGTATCCGTGCGAGGTGCACTATCCCGTCTTGACACATGACGGCCATCTCTTC
ACTCGCCTCGTGCCCATCTCGACGTCTCTCCGCCGGGGGGATCGAGATCAGCAGCAGAGGTCCCAGGCAGAAGAG
GCCGTCCAGGTCAAGGGGGAGGCGCCGTCTTCGTCGTCAAACACCCAGGAGACCGGGGTGGTGTCGGAGCCTGCG
ATTGTGGCCGGCAAGACCATAGATGGGTTCTGTTATGTCAACGACACGCACTACATCGCCGGCACTGGCAGGTAC
TGGGATCGTCTCAGGCCGGCTCTTGGCTGGTATCAGGTCGGACAGGCAGCGGCGCCGAAGCCGGACACGCAAAGC
TTCGGGCCCTGTTACGAAGGTCCGACGACGGATCCGACGACGGTAGGACGGCTTCCTCAAGCGGCCGAGCTTGCT
CCGAAAGACTCGGCCATCCTCCCAAAGAAAAGGGAAATCTGCGTCCTCAACGACACGCACTACTACGCTGAACCT
GACCAGTACTATAACATAGAGAACTCCGATCAGGGCTGGTACAGGGCCGATGGGGCCCAACGGCTAGATACGGCG
GGCTTCGAGCCGTGCTTCCAGAAGCCGGCGACGAACTGGACGGCAGGTCGACTTGCTCGAGCGGCTGAACCTGTT
GCCAAGCCGGAGAAGAAGAATGTCGTCGTCGTCGTCGGCAAGGAACAAGGGCACTGCGTGCTCAATGCGACGCAC
TACTACGCCGAACCAGACAGGTACTACAACATGAAGAATCCGGGACGGGGCTGGTATAGCGTGGCTGGGGTGCCG
GCGCCGGAGACGGCCGACTTCGGTCCGTGCGAGGAGAACCCGAAGGTGGAGATACCGAGGCGCGGCGACGGCTGC
AAGCCGCCTAAGGTGACGTTCCGCCTGCTGGCGAAGATGCGGCCGGGCTATGCGGTCAAGCTGGTTGGCGACTTG
CAGGAGATGGGCAACTGGAACCCAGAAAAGGCCATGCCCATGGACACCTCCGAGTACAGCGAGGAGCATCCAGTA
TTGAAGGACGCCATCATGTTGAAGCCCGGCCGCTTCCAGTACAAGTACGTCATGGTTGGGCCCGAAGGTCAGGTC
GTTTGGGAAGCGGGCGAGAAGCGCAATCTGGAGGTCCAGGGCGGGTGTCAGGTTCGGACGGAGGATTGGCGGGGG
GGGGGCGGATAA
Gene >Ophio5|6974
ATGCGTCTCGCCGCCCTCGCCGTTTTCGCCGCCGCCCTCGCCCCGGGCGTCTCGGCCTCGGAGTCGGCCGCCGCC
GCCGCCGCAGCAGCAGCAGCCATCGCGGCCGAGCTACAGGCCAACTACAGCATCGACTGGAACAAGCCGCCGGCG
CGAGAGCGCTGGCAGACGGAGCTGACCTGCTTCGACCTATGGTTCAAGTGTCCCTCGATACGGCTTGGCTACGAG
GAGCGGCTGGTGCCCGTTGGGCGCACCGAGGTCAGCGTCTACCACACGGCCCATGTCGACAATGCTCTCTTCAAC
ACGGCCGAGCGGCGCGTGGCGCTTCGCGTTCAAAGCTCCACGGCTATAGCTGAAGGCGTCACGAGCGGGTGGAGC
ATCGCAGCCCGCGTCACCGGCGGTCCCGGCCCCCTGAGACTGAGCATGGCGAAGAACGAGCAGGGCCTCGGCCCG
CGACAAAGAAAGACGACGACCCGTACGAAGCACATGACCCGCTGCGACCCAAGACATGACTGCCGCATCGAGACC
TGGACCTTTCACGTCAAGGTCTCCGGCACGTGCGAGAAGAAGGCTTGGATAGAGTGTGGCGAAAGGGAAGACGCC
TGCCACGGTCCGCGCGCAAAGGCCGGCTCCAGCTGCGATCAGGTAAACGCCTTCCACGACAAACACTGCAATAAT
CCTGCGAGCTCGGGTCACCAGCAGTATCCGTGCGAGGTGCACTATCCCGTCTTGACACATGACGGCCATCTCTTC
ACTCGCCTCGTGCCCATCTCGACGTCTCTCCGCCGGGGGGATCGAGATCAGCAGCAGAGGTCCCAGGCAGAAGAG
GCCGTCCAGGTCAAGGGGGAGGCGCCGTCTTCGTCGTCAAACACCCAGGAGACCGGGGTGGTGTCGGAGCCTGCG
ATTGTGGCCGGCAAGACCATAGATGGGTTCTGTTATGTCAACGACACGCACTACATCGCCGGCACTGGCAGGTAC
TGGGATCGTCTCAGGCCGGCTCTTGGCTGGTATCAGGTCGGACAGGCAGCGGCGCCGAAGCCGGACACGCAAAGC
TTCGGGCCCTGTTACGAAGGTCCGACGACGGATCCGACGACGGTAGGACGGCTTCCTCAAGCGGCCGAGCTTGCT
CCGAAAGACTCGGCCATCCTCCCAAAGAAAAGGGAAATCTGCGTCCTCAACGACACGCACTACTACGCTGAACCT
GACCAGTACTATAACATAGAGAACTCCGATCAGGGCTGGTACAGGGCCGATGGGGCCCAACGGCTAGATACGGCG
GGCTTCGAGCCGTGCTTCCAGAAGCCGGCGACGAACTGGACGGCAGGTCGACTTGCTCGAGCGGCTGAACCTGTT
GCCAAGCCGGAGAAGAAGAATGTCGTCGTCGTCGTCGGCAAGGAACAAGGGCACTGCGTGCTCAATGCGACGCAC
TACTACGCCGAACCAGACAGGTACTACAACATGAAGAATCCGGGACGGGGCTGGTATAGCGTGGCTGGGGTGCCG
GCGCCGGAGACGGCCGACTTCGGTCCGTGCGAGGAGAACCCGAAGGTGGAGATACCGAGGCGCGGCGACGGCTGC
AAGCCGCCTAAGGTGACGTTCCGCCTGCTGGCGAAGATGCGGCCGGGCTATGCGGTCAAGCTGGTTGGCGACTTG
CAGGAGATGGGCAACTGGAACCCAGAAAAGGCCATGCCCATGGACACCTCCGAGTACAGCGAGGAGCATCCAGTA
TTGAAGGACGCCATCATGTTGAAGCCCGGCCGCTTCCAGTACAAGTACGTCATGGTTGGGCCCGAAGGTCAGGTC
GTTTGGGAAGCGGGCGAGAAGCGCAATCTGGAGGTCCAGGGCGGGTGTCAGGTTCGGACGGAGGATTGGCGGGGG
GGGGGCGGATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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