Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6963
Gene name
Locationscaffold_638:7487..8683
Strand+
Gene length (bp)1196
Transcript length (bp)930
Coding sequence length (bp)927
Protein length (aa) 309

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06966 DUF1295 Protein of unknown function (DUF1295) 5.8E-41 81 301

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 50 70 20
3 85 107 22
4 128 150 22
5 155 177 22
6 242 264 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6963
MTFFQGLLRLTSFRSPLLQTLVPSVAAALALQAAAALPSTLAQTERFYDVSGSATVLAVGALSLCLPGLRSGRGG
GLRAVLAGRQWRQIALTAMAMVWTLRLGTYLFQRVLNHGHDSRFDTMRSRPVVFAAAFAAQAVWVSAIMMPVVVV
NAVPAAALPAALGFADVVGFALWTAGITLEAAADRQKGSWLEGRRRKEHDEPFLSSGLFSFCRFPNYLGEITLWT
GLATVAASALARRPAQLALGLGAGPAGVLTTTALALLSPAMTTFLLTQVSGIPLSEAKYDERYNHREDYRAWKRD
TPRLVPGVW
Coding >Ophio5|6963
ATGACATTTTTCCAGGGCCTGCTGCGGCTGACGTCGTTCCGCTCGCCGCTTCTCCAGACGCTGGTGCCGTCTGTG
GCGGCCGCCTTGGCGCTACAGGCAGCGGCTGCGCTTCCTTCGACGCTGGCCCAGACGGAGCGCTTCTACGACGTG
TCGGGATCGGCGACGGTGCTGGCCGTCGGTGCCCTGAGTCTCTGTCTGCCGGGCTTGCGGTCCGGTCGAGGTGGT
GGGTTGAGGGCTGTGTTGGCGGGGAGGCAGTGGAGGCAGATTGCTCTTACGGCCATGGCTATGGTGTGGACGCTG
CGACTGGGCACATACCTCTTCCAACGCGTCCTCAACCACGGCCACGACTCCCGCTTCGACACGATGCGTAGTCGA
CCGGTCGTCTTCGCCGCCGCCTTCGCCGCCCAGGCCGTCTGGGTCTCGGCCATCATGATGCCCGTCGTCGTCGTC
AACGCCGTCCCCGCCGCCGCCCTTCCCGCCGCCCTCGGCTTCGCTGATGTCGTCGGCTTCGCTCTTTGGACTGCT
GGCATCACGCTCGAGGCGGCGGCCGATCGGCAGAAGGGGAGCTGGTTGGAGGGGCGGCGGCGGAAGGAGCATGAT
GAGCCGTTTCTGTCGTCGGGCTTGTTTTCTTTTTGTCGCTTCCCCAACTACCTCGGCGAAATCACGCTATGGACC
GGCCTCGCGACCGTCGCCGCCTCCGCTCTCGCCCGTCGACCTGCACAGCTCGCTCTCGGCCTGGGCGCTGGACCG
GCCGGCGTGCTGACGACGACGGCGCTCGCGCTGTTGAGTCCCGCCATGACCACCTTTTTGCTGACGCAGGTGTCC
GGCATACCGTTGAGCGAGGCCAAGTACGATGAACGCTATAATCATCGCGAAGACTATCGTGCTTGGAAGAGGGAT
ACGCCGAGGCTGGTGCCGGGCGTGTGG
Transcript >Ophio5|6963
ATGACATTTTTCCAGGGCCTGCTGCGGCTGACGTCGTTCCGCTCGCCGCTTCTCCAGACGCTGGTGCCGTCTGTG
GCGGCCGCCTTGGCGCTACAGGCAGCGGCTGCGCTTCCTTCGACGCTGGCCCAGACGGAGCGCTTCTACGACGTG
TCGGGATCGGCGACGGTGCTGGCCGTCGGTGCCCTGAGTCTCTGTCTGCCGGGCTTGCGGTCCGGTCGAGGTGGT
GGGTTGAGGGCTGTGTTGGCGGGGAGGCAGTGGAGGCAGATTGCTCTTACGGCCATGGCTATGGTGTGGACGCTG
CGACTGGGCACATACCTCTTCCAACGCGTCCTCAACCACGGCCACGACTCCCGCTTCGACACGATGCGTAGTCGA
CCGGTCGTCTTCGCCGCCGCCTTCGCCGCCCAGGCCGTCTGGGTCTCGGCCATCATGATGCCCGTCGTCGTCGTC
AACGCCGTCCCCGCCGCCGCCCTTCCCGCCGCCCTCGGCTTCGCTGATGTCGTCGGCTTCGCTCTTTGGACTGCT
GGCATCACGCTCGAGGCGGCGGCCGATCGGCAGAAGGGGAGCTGGTTGGAGGGGCGGCGGCGGAAGGAGCATGAT
GAGCCGTTTCTGTCGTCGGGCTTGTTTTCTTTTTGTCGCTTCCCCAACTACCTCGGCGAAATCACGCTATGGACC
GGCCTCGCGACCGTCGCCGCCTCCGCTCTCGCCCGTCGACCTGCACAGCTCGCTCTCGGCCTGGGCGCTGGACCG
GCCGGCGTGCTGACGACGACGGCGCTCGCGCTGTTGAGTCCCGCCATGACCACCTTTTTGCTGACGCAGGTGTCC
GGCATACCGTTGAGCGAGGCCAAGTACGATGAACGCTATAATCATCGCGAAGACTATCGTGCTTGGAAGAGGGAT
ACGCCGAGGCTGGTGCCGGGCGTGTGGTGA
Gene >Ophio5|6963
ATGACATTTTTCCAGGGCCTGCTGCGGCTGACGTCGTTCCGCTCGCCGCTTCTCCAGACGCTGGTGCCGTCTGTG
GCGGCCGCCTTGGCGCTACAGGCAGCGGCTGCGCTTCCTTCGACGCTGGCCCAGACGGAGCGCTTCTACGACGTG
TCGGGATCGGCGACGGTGCTGGCCGTCGGTGCCCTGAGTCTCTGTCTGCCGGGCTTGCGGTCCGGTCGAGGTGGT
GGGTTGAGGGCTGTGTTGGCGGGGAGGCAGTGGAGGCAGATTGCTCTTACGGCCATGGCTATGGTGTGGACGCTG
CGACGTGAGTTCGTTCTTCTTCTTTTTTTTTTATATTCTGCTTCTTCCTCCTCCACCTCTCTTTACATTACACGA
GAGAGAGGCTGAAAAAGGGCGGAAAAAAAAATTAAAAATTTAACCACTGGACGCAGTGGGCACATACCTCTTCCA
ACGCGTCCTCAACCACGGCCACGACTCCCGCTTCGACACGATGCGTAGTCGACCGGTCGTCTTCGCCGCCGCCTT
CGCCGCCCAGGCCGTCTGGGTCTCGGCCATCATGATGCCCGTCGTCGTCGTCAACGCCGTCCCCGCCGCCGCCCT
TCCCGCCGCCCTCGGCTTCGCTGATGTCGTCGGCTTCGCTCTTTGGACTGCTGGCATCACGCTCGAGGCGGCGGC
CGATCGGCAGAAGGGGAGCTGGTTGGAGGGGCGGCGGCGGAAGGAGCATGATGAGCCGTTTCTGTCGTCGGGCTT
GTTTTCTTTTTGGTACGTCTGTCTGTCTTTCTCTCTCTTTCTTTCTCTCTCTCTCCTCTTCTTCGTCTTCTTCTC
TCCATATGCATGCATGTATGTATGTATGCATGTGTATAAGTGTGTCTTGTCTCCTCTACTGACTCGGCCGACCAA
GTCGCTTCCCCAACTACCTCGGCGAAATCACGCTATGGACCGGCCTCGCGACCGTCGCCGCCTCCGCTCTCGCCC
GTCGACCTGCACAGCTCGCTCTCGGCCTGGGCGCTGGACCGGCCGGCGTGCTGACGACGACGGCGCTCGCGCTGT
TGAGTCCCGCCATGACCACCTTTTTGCTGACGCAGGTGTCCGGCATACCGTTGAGCGAGGCCAAGTACGATGAAC
GCTATAATCATCGCGAAGACTATCGTGCTTGGAAGAGGGATACGCCGAGGCTGGTGCCGGGCGTGTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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