Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6954
Gene name
Locationscaffold_637:1263..2231
Strand+
Gene length (bp)968
Transcript length (bp)789
Coding sequence length (bp)786
Protein length (aa) 262

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 52 0.5

Transmembrane Domains

Domain # Start End Length
1 21 43 22
2 67 89 22
3 101 123 22
4 138 160 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6954
MAWACHYLRLLKGTDQRTYRRVVWLTIFFIFFAHLGCALSLILACTPVAKSWNPLIDGSCLPPGPSFTGYAIVTI
VSDVIVALLPIPVLLKLNVRLEKKIGLIGIFMLGLFTTLCSIMRYTQINRIQYGDGNSTMLVLWGTIEFNVGNMV
SSLPFLAPVCMRKAKDYRSKYSGGSSHGHSRSRGRKNTDRFKLSDVSNDKTAFALSSKSKSASQDEILHDDTVAD
KRSHHSIVKSVTYTVQVDKDAEDQASYDRGHDEPSDV
Coding >Ophio5|6954
ATGGCTTGGGCCTGCCACTACCTGCGCCTGCTCAAGGGCACCGATCAGCGCACCTATCGCAGGGTCGTCTGGCTC
ACCATCTTTTTCATCTTCTTTGCCCATCTGGGTTGCGCCCTTTCGCTCATCCTCGCCTGCACCCCCGTGGCCAAA
TCCTGGAATCCCCTCATCGACGGCTCCTGTTTGCCGCCGGGGCCGTCCTTTACCGGCTACGCCATCGTCACCATC
GTCTCGGACGTTATTGTCGCCCTGCTGCCCATTCCGGTGCTGTTGAAGCTCAATGTCCGACTGGAAAAGAAGATT
GGCCTCATTGGCATCTTTATGCTCGGCCTCTTCACTACCCTCTGCTCCATCATGCGCTACACCCAGATCAACCGC
ATCCAGTACGGAGACGGCAACTCGACCATGTTGGTGCTCTGGGGAACCATCGAGTTCAACGTCGGCAACATGGTC
TCGTCACTGCCTTTCCTGGCCCCCGTCTGCATGAGAAAGGCCAAGGACTACCGATCTAAGTACTCGGGAGGCAGC
TCGCACGGCCACAGCCGGAGCCGGGGGCGCAAAAACACCGATCGCTTCAAGCTCAGCGACGTCAGCAACGACAAG
ACGGCCTTTGCCCTGTCTTCCAAGTCCAAGTCGGCCAGCCAAGACGAAATCTTGCACGACGATACCGTCGCCGAC
AAGAGAAGTCACCACTCCATCGTCAAGTCCGTCACCTACACCGTCCAAGTCGACAAGGACGCCGAGGACCAGGCT
AGCTATGACCGCGGTCACGACGAGCCGTCTGATGTG
Transcript >Ophio5|6954
ATGGCTTGGGCCTGCCACTACCTGCGCCTGCTCAAGGGCACCGATCAGCGCACCTATCGCAGGGTCGTCTGGCTC
ACCATCTTTTTCATCTTCTTTGCCCATCTGGGTTGCGCCCTTTCGCTCATCCTCGCCTGCACCCCCGTGGCCAAA
TCCTGGAATCCCCTCATCGACGGCTCCTGTTTGCCGCCGGGGCCGTCCTTTACCGGCTACGCCATCGTCACCATC
GTCTCGGACGTTATTGTCGCCCTGCTGCCCATTCCGGTGCTGTTGAAGCTCAATGTCCGACTGGAAAAGAAGATT
GGCCTCATTGGCATCTTTATGCTCGGCCTCTTCACTACCCTCTGCTCCATCATGCGCTACACCCAGATCAACCGC
ATCCAGTACGGAGACGGCAACTCGACCATGTTGGTGCTCTGGGGAACCATCGAGTTCAACGTCGGCAACATGGTC
TCGTCACTGCCTTTCCTGGCCCCCGTCTGCATGAGAAAGGCCAAGGACTACCGATCTAAGTACTCGGGAGGCAGC
TCGCACGGCCACAGCCGGAGCCGGGGGCGCAAAAACACCGATCGCTTCAAGCTCAGCGACGTCAGCAACGACAAG
ACGGCCTTTGCCCTGTCTTCCAAGTCCAAGTCGGCCAGCCAAGACGAAATCTTGCACGACGATACCGTCGCCGAC
AAGAGAAGTCACCACTCCATCGTCAAGTCCGTCACCTACACCGTCCAAGTCGACAAGGACGCCGAGGACCAGGCT
AGCTATGACCGCGGTCACGACGAGCCGTCTGATGTGTAA
Gene >Ophio5|6954
ATGGCTTGGGCCTGCCAGTCAAGTTGAGGCCCAAAGCCAACCTCATCCCTTACACGCGCGTCAACTTCGCCGGCC
GTCCCATCTATCAGCTCGGCATCTCCTTCTTCAAGGTGGCGCTTTGCATCAGCTACCTGCGCCTGCTCAAGGGCA
CCGATCAGCGCACCTATCGCAGGGTCGTCTGGCTCACCATCTTTTTCATCTTCTTTGCCCATCTGGGTTGCGCCC
TTTCGCTCATCCTCGCCTGCACCCCCGTGGCCAAATCCTGGAATCCCCTCATCGACGGCTCCTGTTTGCCGCCGG
GGCCGTCCTTTACCGGCTACGCCATCGTCACCATCGTCTCGGACGTTATTGTCGCCCTGCTGCCCATTCCGGTGC
TGTTGAAGCTCAATGTCCGACTGGAAAAGAAGATTGGCCTCATTGGCATCTTTATGCTCGGCCTCTTCACTACCC
TCTGCTCCATCATGCGCTACACCCAGATCAACCGCATCCAGTACGGAGACGGCAACTCGACCATGTTGGTGCTCT
GGGGAACCATCGAGTTCAACGTCGGCGTATGTAATCTCGTCCATTCCATTCATATACATGTCATGTATTCGAGCT
GACCTTTGTTTGCCTCTCAGAACATGGTCTCGTCACTGCCTTTCCTGGCCCCCGTCTGCATGAGAAAGGCCAAGG
ACTACCGATCTAAGTACTCGGGAGGCAGCTCGCACGGCCACAGCCGGAGCCGGGGGCGCAAAAACACCGATCGCT
TCAAGCTCAGCGACGTCAGCAACGACAAGACGGCCTTTGCCCTGTCTTCCAAGTCCAAGTCGGCCAGCCAAGACG
AAATCTTGCACGACGATACCGTCGCCGACAAGAGAAGTCACCACTCCATCGTCAAGTCCGTCACCTACACCGTCC
AAGTCGACAAGGACGCCGAGGACCAGGCTAGCTATGACCGCGGTCACGACGAGCCGTCTGATGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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