Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|694
Gene name
Locationscaffold_119:19534..20056
Strand-
Gene length (bp)522
Transcript length (bp)468
Coding sequence length (bp)465
Protein length (aa) 155

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.5

Transmembrane Domains

Domain # Start End Length
1 52 74 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|694
MTATAASGPQATHTTYEGDAGGGAAPGAQSGVDAGASGNNSGAMSLPTGGLVAIVVIVVAVCLIGATTTTLYFLT
KKREWKLRERVRKSARRVASVLTPRRAQFPNSARKPGSSSLSGRSKPTDKAPPSSHTRLEDLEMGKAQAQVRNKA
EGPNA
Coding >Ophio5|694
ATGACTGCAACGGCCGCGAGCGGGCCCCAAGCCACTCACACGACGTACGAGGGCGATGCCGGCGGCGGCGCCGCT
CCGGGTGCTCAGTCCGGCGTGGACGCAGGCGCCTCCGGGAACAACTCGGGAGCCATGAGCCTTCCGACAGGCGGC
CTGGTCGCCATTGTCGTCATTGTTGTTGCTGTGTGCTTGATCGGCGCGACGACGACGACCCTTTACTTCCTCACC
AAGAAGAGAGAGTGGAAATTGAGGGAAAGAGTCAGAAAGTCGGCCCGCAGAGTGGCCTCGGTCCTCACTCCGCGG
AGGGCGCAGTTTCCAAATTCGGCCCGGAAGCCGGGGAGTTCATCTTTGAGCGGCCGCTCGAAACCAACCGACAAA
GCGCCACCGTCGTCTCACACCCGGCTGGAGGACCTGGAAATGGGGAAAGCTCAAGCACAGGTGCGGAACAAGGCG
GAAGGACCGAATGCA
Transcript >Ophio5|694
ATGACTGCAACGGCCGCGAGCGGGCCCCAAGCCACTCACACGACGTACGAGGGCGATGCCGGCGGCGGCGCCGCT
CCGGGTGCTCAGTCCGGCGTGGACGCAGGCGCCTCCGGGAACAACTCGGGAGCCATGAGCCTTCCGACAGGCGGC
CTGGTCGCCATTGTCGTCATTGTTGTTGCTGTGTGCTTGATCGGCGCGACGACGACGACCCTTTACTTCCTCACC
AAGAAGAGAGAGTGGAAATTGAGGGAAAGAGTCAGAAAGTCGGCCCGCAGAGTGGCCTCGGTCCTCACTCCGCGG
AGGGCGCAGTTTCCAAATTCGGCCCGGAAGCCGGGGAGTTCATCTTTGAGCGGCCGCTCGAAACCAACCGACAAA
GCGCCACCGTCGTCTCACACCCGGCTGGAGGACCTGGAAATGGGGAAAGCTCAAGCACAGGTGCGGAACAAGGCG
GAAGGACCGAATGCATGA
Gene >Ophio5|694
ATGACTGCAACGGCCGCGAGCGGGCCCCAAGCCACTCACACGACGTACGAGGGCGATGCCGGCGGCGGCGCCGCT
CCGGGTGCTCAGTCCGGCGTGGACGCAGGCGCCTCCGGGAACAACTCGGGAGCCATGAGCCTTCCGACAGGCGGC
CTGGTCGCCATTGTCGTCATTGTTGTTGCTGTGTGCTTGATCGGCGGTGTGACAACCCGAAACCCGATTCATCAT
TTGACGAAGCACTGACATCTCCCAGCGACGACGACGACCCTTTACTTCCTCACCAAGAAGAGAGAGTGGAAATTG
AGGGAAAGAGTCAGAAAGTCGGCCCGCAGAGTGGCCTCGGTCCTCACTCCGCGGAGGGCGCAGTTTCCAAATTCG
GCCCGGAAGCCGGGGAGTTCATCTTTGAGCGGCCGCTCGAAACCAACCGACAAAGCGCCACCGTCGTCTCACACC
CGGCTGGAGGACCTGGAAATGGGGAAAGCTCAAGCACAGGTGCGGAACAAGGCGGAAGGACCGAATGCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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