Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6921
Gene name
Locationscaffold_63:50908..52674
Strand-
Gene length (bp)1766
Transcript length (bp)1503
Coding sequence length (bp)1500
Protein length (aa) 500

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 1.8E-32 32 404

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 16 432 3.0E-128
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 4 454 1.0E-122
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 3 442 4.0E-55
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 12 442 2.0E-35
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 19 243 5.0E-29
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Swissprot ID Swissprot Description Start End E-value
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 16 432 3.0E-128
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 4 454 1.0E-122
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 3 442 4.0E-55
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 12 442 2.0E-35
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 19 243 5.0E-29
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 12 238 6.0E-27
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 16 389 1.0E-25
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 11 247 1.0E-24
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 6 236 1.0E-23
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 15 226 2.0E-19
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 22 233 4.0E-19
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 16 232 9.0E-19
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 16 233 2.0E-18
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 22 242 2.0E-18
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 19 459 2.0E-16
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 14 208 5.0E-16
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 13 239 1.0E-15
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 1 263 3.0E-15
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 21 242 5.0E-15
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 16 439 1.0E-13
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 19 243 2.0E-12
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 39 233 2.0E-12
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 25 203 3.0E-10
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 4 241 5.0E-09
sp|P39398|LGOT_ECOLI Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 37 209 2.0E-08
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 16 267 4.0E-07
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 21 197 3.0E-06
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 22 213 8.0E-06
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GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0009987 cellular process No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0005215 transporter activity No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 93 112 19
2 122 144 22
3 149 171 22
4 186 208 22
5 258 280 22
6 300 319 19
7 328 350 22
8 360 382 22
9 395 417 22
10 427 446 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6921
MARRRQHQGQQQSPGEGVLVRKIDFFILSFCCLSYFVNYLDRSNLANAYISGMREDLAFVGDQLNQINTCFTVGY
ILGQVPSNLSLTYIRPRLWFPTMMVLWAGLTMATAAVHSPQAIMAIRLFQGACEASTFVGTHLILGAWYTQEELG
IRSGIFTASGLAGTMIGGFIQTAIHAGLNGRRGLAGWRWLFIIDGLVTLPVAVYGFALFPDTPRTTAAPYLSPAE
RALARTRVPEKPESEESALTIVFARRVLTSWQFWGFVILWVLAGEVESPAANSLLALFMQSHPSRKYSVAQMNNY
PAGVSAVGVVVTLACAALTDRLGGRRQLAGYIAAGAGLVSSVMVLAAGHFPPSPKATAVVFAAYYLSGAVYATQA
IFFAWCNDAMRFESDAFRAVVLAAMNLGSNAVNAWWSILFYGASMAPWFTRGMWALLACCIALALWTAGLARKIA
LEDNRRAVEAVVVESFFPRGSPEVSALGSDAYRGTCGLRPGGCASDGKGS
Coding >Ophio5|6921
ATGGCTCGACGACGGCAGCACCAGGGGCAGCAGCAATCGCCGGGAGAAGGCGTCCTGGTGCGAAAAATTGACTTC
TTTATACTCAGCTTCTGCTGCCTGAGTTACTTTGTCAATTATCTCGACCGGTCTAACCTCGCCAACGCCTATATC
TCGGGCATGCGTGAGGATCTAGCCTTTGTTGGCGACCAGCTGAACCAGATCAACACCTGCTTTACCGTCGGCTAC
ATCCTCGGCCAGGTGCCTTCCAACCTCTCGTTGACCTACATCCGGCCACGCCTCTGGTTCCCCACCATGATGGTC
CTCTGGGCCGGACTCACCATGGCGACGGCAGCGGTTCACAGCCCGCAGGCCATCATGGCCATCCGCCTGTTTCAA
GGTGCCTGCGAGGCCTCTACTTTTGTAGGCACCCACCTGATTCTTGGAGCCTGGTACACGCAGGAAGAGCTCGGC
ATCCGCAGCGGCATCTTTACGGCCTCCGGTCTGGCCGGCACCATGATCGGCGGCTTCATCCAAACCGCCATTCAT
GCCGGACTCAATGGCCGGAGAGGTCTGGCCGGTTGGCGGTGGCTGTTTATCATTGATGGTCTTGTTACCCTGCCG
GTGGCTGTATATGGCTTCGCCTTGTTTCCGGACACGCCTCGGACCACGGCGGCGCCGTATCTGAGCCCGGCTGAG
CGAGCCTTGGCCCGGACTCGTGTTCCGGAGAAGCCAGAATCGGAAGAGTCAGCTCTGACGATAGTCTTCGCCCGC
CGCGTGCTGACCAGCTGGCAATTCTGGGGTTTCGTTATCCTATGGGTTCTCGCCGGCGAGGTCGAATCGCCAGCT
GCCAACTCGCTTCTAGCCCTCTTCATGCAAAGCCATCCGAGCCGAAAGTACAGCGTGGCCCAGATGAATAATTAT
CCGGCCGGCGTCTCTGCCGTCGGGGTCGTTGTCACGCTCGCCTGTGCCGCCCTGACGGACCGGCTCGGAGGCCGA
AGACAGCTTGCCGGATATATTGCTGCCGGAGCCGGTCTCGTCTCGTCCGTCATGGTGCTCGCCGCGGGTCATTTT
CCGCCTAGTCCGAAGGCGACCGCTGTCGTTTTTGCCGCCTACTATCTCTCCGGAGCCGTTTACGCCACTCAGGCC
ATCTTTTTCGCCTGGTGTAACGACGCCATGCGCTTCGAGTCGGATGCTTTTCGTGCAGTCGTCCTGGCAGCCATG
AATCTCGGAAGCAACGCCGTCAACGCATGGTGGAGCATTCTCTTCTACGGGGCTTCCATGGCGCCTTGGTTCACT
AGAGGCATGTGGGCCTTGCTGGCCTGCTGCATTGCCCTGGCGCTCTGGACCGCTGGCTTGGCCCGAAAGATTGCC
CTAGAGGACAACAGACGGGCGGTCGAGGCGGTCGTTGTGGAAAGCTTTTTTCCTAGGGGGTCTCCGGAAGTGTCT
GCTCTCGGTTCCGATGCCTATCGGGGAACTTGCGGCCTTCGTCCCGGCGGCTGTGCGAGCGACGGAAAAGGCAGC
Transcript >Ophio5|6921
ATGGCTCGACGACGGCAGCACCAGGGGCAGCAGCAATCGCCGGGAGAAGGCGTCCTGGTGCGAAAAATTGACTTC
TTTATACTCAGCTTCTGCTGCCTGAGTTACTTTGTCAATTATCTCGACCGGTCTAACCTCGCCAACGCCTATATC
TCGGGCATGCGTGAGGATCTAGCCTTTGTTGGCGACCAGCTGAACCAGATCAACACCTGCTTTACCGTCGGCTAC
ATCCTCGGCCAGGTGCCTTCCAACCTCTCGTTGACCTACATCCGGCCACGCCTCTGGTTCCCCACCATGATGGTC
CTCTGGGCCGGACTCACCATGGCGACGGCAGCGGTTCACAGCCCGCAGGCCATCATGGCCATCCGCCTGTTTCAA
GGTGCCTGCGAGGCCTCTACTTTTGTAGGCACCCACCTGATTCTTGGAGCCTGGTACACGCAGGAAGAGCTCGGC
ATCCGCAGCGGCATCTTTACGGCCTCCGGTCTGGCCGGCACCATGATCGGCGGCTTCATCCAAACCGCCATTCAT
GCCGGACTCAATGGCCGGAGAGGTCTGGCCGGTTGGCGGTGGCTGTTTATCATTGATGGTCTTGTTACCCTGCCG
GTGGCTGTATATGGCTTCGCCTTGTTTCCGGACACGCCTCGGACCACGGCGGCGCCGTATCTGAGCCCGGCTGAG
CGAGCCTTGGCCCGGACTCGTGTTCCGGAGAAGCCAGAATCGGAAGAGTCAGCTCTGACGATAGTCTTCGCCCGC
CGCGTGCTGACCAGCTGGCAATTCTGGGGTTTCGTTATCCTATGGGTTCTCGCCGGCGAGGTCGAATCGCCAGCT
GCCAACTCGCTTCTAGCCCTCTTCATGCAAAGCCATCCGAGCCGAAAGTACAGCGTGGCCCAGATGAATAATTAT
CCGGCCGGCGTCTCTGCCGTCGGGGTCGTTGTCACGCTCGCCTGTGCCGCCCTGACGGACCGGCTCGGAGGCCGA
AGACAGCTTGCCGGATATATTGCTGCCGGAGCCGGTCTCGTCTCGTCCGTCATGGTGCTCGCCGCGGGTCATTTT
CCGCCTAGTCCGAAGGCGACCGCTGTCGTTTTTGCCGCCTACTATCTCTCCGGAGCCGTTTACGCCACTCAGGCC
ATCTTTTTCGCCTGGTGTAACGACGCCATGCGCTTCGAGTCGGATGCTTTTCGTGCAGTCGTCCTGGCAGCCATG
AATCTCGGAAGCAACGCCGTCAACGCATGGTGGAGCATTCTCTTCTACGGGGCTTCCATGGCGCCTTGGTTCACT
AGAGGCATGTGGGCCTTGCTGGCCTGCTGCATTGCCCTGGCGCTCTGGACCGCTGGCTTGGCCCGAAAGATTGCC
CTAGAGGACAACAGACGGGCGGTCGAGGCGGTCGTTGTGGAAAGCTTTTTTCCTAGGGGGTCTCCGGAAGTGTCT
GCTCTCGGTTCCGATGCCTATCGGGGAACTTGCGGCCTTCGTCCCGGCGGCTGTGCGAGCGACGGAAAAGGCAGC
TGA
Gene >Ophio5|6921
ATGGCTCGACGACGGCAGCACCAGGGGCAGCAGCAATCGCCGGGAGAAGGCGTCCTGGTGCGAAAAATTGACTTC
TTTATACTCAGCTTCTGCTGCCTGAGTTACTTTGTCAATTATGTGAGCCCCTCCGTGGGCTGGTGATAGCCTCTG
TTCTGACTTGAATGCGTATGGCCCGCAGCTCGACCGGTCTAACCTCGCCAACGCCTATATCTCGGGCATGCGTGA
GGATCTAGCCTTTGTTGGCGACCAGCTGAACCAGATCAACACCTGCTTTACCGTCGGGTGAGTGGCTCTGTTTCC
CTCTCCCCCCCCCTTAAACCTACGTATGCAGATGCGTATGAAGAAGATGATACATAGAAGACATGAACCAATACA
AACCCCCCCCCTTGACTTACCACTCCCAGCTACATCCTCGGCCAGGTGCCTTCCAACCTCTCGTTGACCTACATC
CGGCCACGCCTCTGGTTCCCCACCATGATGGTCCTCTGGGCCGGACTCACCATGGCGACGGCAGCGGTTCACAGC
CCGCAGGCCATCATGGCCATCCGCCTGTTTCAAGGTGCCTGCGAGGCCTCTACTTTTGTAGGCACCCACCTGATT
CTTGGAGCCTGGTACACGCAGGAAGAGCTCGGCATCCGCAGCGGCATCTTTACGGCCTCCGGTCTGGCCGGCACC
ATGATCGGCGGCTTCATCCAAACCGCCATTCATGCCGGACTCAATGGCCGGAGAGGTCTGGCCGGTTGGCGGTGG
CTGTTTATCATTGATGGTCTTGTTACCCTGCCGGTGGCTGTATATGGCTTCGCCTTGTTTCCGGACACGCCTCGG
ACCACGGCGGCGCCGTATCTGAGCCCGGCTGAGCGAGCCTTGGCCCGGACTCGTGTTCCGGAGAAGCCAGAATCG
GAAGAGTCAGCTCTGACGATAGTCTTCGCCCGCCGCGTGCTGACCAGCTGGCAATTCTGGGGTTTCGTTATCCTA
TGGGTTCTCGCCGGCGAGGTCGAATCGCCAGCTGCCAACTCGCTTCTAGCCCTCTTCATGCAAAGCCATCCGAGC
CGAAAGTACAGCGTGGCCCAGATGAATAATTATCCGGCCGGCGTCTCTGCCGTCGGGGTCGTTGTCACGCTCGCC
TGTGCCGCCCTGACGGACCGGCTCGGAGGCCGAAGACAGCTTGCCGGATATATTGCTGCCGGAGCCGGTCTCGTC
TCGTCCGTCATGGTGCTCGCCGCGGGTCATTTTCCGCCTAGTCCGAAGGCGACCGCTGTCGTTTTTGCCGCCTAC
TATCTCTCCGGAGCCGTTTACGCCACTCAGGCCATCTTTTTCGCCTGGTGTAACGACGCCATGCGCTTCGAGTCG
GATGCTTTTCGTGCAGTCGTCCTGGCAGCCATGAATCTCGGAAGCAACGCCGTCAACGCATGGTGGAGCATTCTC
TTCTACGGGGCTTCCATGGCGCCTTGGTTCACTGTCCGTCTTCCCTCTCCCCCGTCCCCCCCCCCCTTTTTTTTT
CCCCCGGTCTTTTCGCACTGACAAGTCTTGGTTGATAGAGAGGCATGTGGGCCTTGCTGGCCTGCTGCATTGCCC
TGGCGCTCTGGACCGCTGGCTTGGCCCGAAAGATTGCCCTAGAGGACAACAGACGGGCGGTCGAGGCGGTCGTTG
TGGAAAGCTTTTTTCCTAGGGGGTCTCCGGAAGTGTCTGCTCTCGGTTCCGATGCCTATCGGGGAACTTGCGGCC
TTCGTCCCGGCGGCTGTGCGAGCGACGGAAAAGGCAGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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