Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6920
Gene name
Locationscaffold_63:48549..50551
Strand+
Gene length (bp)2002
Transcript length (bp)1932
Coding sequence length (bp)1929
Protein length (aa) 643

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11951 Fungal_trans_2 Fungal specific transcription factor domain 3.8E-41 248 635

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6920
MSGLSLAASAAAQQQIREKSSSLMIGGGECLEPACVPSRVVPLSATPEQQQQQQQRHLYQHSYVHHHNHQRQQQQ
QQQQQQQQQQLQQQQLQQHHRQHQNHFQTSPVEPPSIPESAPGRRRSSSTTSPFAPADEHVDAAAVEAGEEHSST
LVLPSTSSPGASSTPSPSASSSSPSSSPSSSPSSSPSSSSASSAPSSTSSSSVSPFPPIAISAIQSNESQQQAQQ
AQHQQGIDMPVALLPAHGHGSYELLSYYLSRTADSMGNGSTEVNPFIAKLVPIAFSNSLVLQLLLAQSAAHRQAS
HEPEAGTEVAQQYYTESLRLFRNVVGDFVSGKEDHTLTLTVGSLILCLTEVARGDVYGSILDHLSASRALLTMLL
ERPELSGDLVDFLVEFYMHTVASSIIATDPRGSRQPPLSPGIEHTARALVARRYIGQLCGCWLELLLLIPQVFQL
GQALLPAAEAGTGTGTGTGAGAGAGAGDSDETTQLPTADDIITFGFLQSQILAFYPPAGASLYSQLAGLVFKQGA
LLYLWSILGSPGPNSALADLIDGAVAEAASLLGQFPASVRVNTSLCWPLAVIGCCTPDPIIRDMLRERLQTMIET
FGLGNMRETLALLEHVWRQTAEETSPWTLHRSMREHQIWISFA
Coding >Ophio5|6920
ATGTCGGGCTTGTCCTTGGCTGCTTCGGCCGCGGCGCAACAGCAGATTCGCGAAAAGAGCTCGTCATTGATGATT
GGTGGTGGAGAGTGTTTGGAGCCTGCCTGTGTGCCTTCGAGGGTGGTGCCGCTCTCGGCGACCCCGGAGCAGCAG
CAGCAGCAGCAGCAGCGTCATCTGTATCAACATTCTTATGTCCATCACCATAACCATCAACGACAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTTCAGCAACAACAGCTTCAGCAACACCATCGTCAGCATCAAAAT
CACTTTCAGACCTCCCCTGTCGAACCTCCTTCTATCCCAGAGTCAGCTCCGGGTCGACGCCGCTCCTCGTCAACT
ACCAGCCCTTTTGCTCCGGCTGACGAGCACGTCGACGCCGCCGCCGTTGAAGCGGGCGAAGAACACAGCTCGACT
CTCGTTCTGCCCTCAACATCGTCCCCCGGGGCCTCTTCGACTCCGTCGCCATCAGCCTCATCGTCTTCGCCGTCG
TCGTCTCCTTCTTCTTCGCCGTCTTCTTCGCCGTCATCATCATCGGCTTCTTCCGCGCCATCTTCGACCTCTTCT
TCATCCGTCTCTCCTTTTCCTCCCATCGCCATCTCCGCCATCCAATCCAACGAGAGCCAGCAGCAGGCTCAGCAA
GCTCAGCACCAGCAAGGCATCGATATGCCTGTCGCTCTTCTCCCCGCCCACGGCCACGGTTCTTACGAGCTGCTC
AGCTACTATCTTTCCCGAACGGCCGACAGCATGGGCAACGGCTCGACCGAAGTCAACCCCTTTATCGCCAAGCTC
GTGCCCATAGCCTTTTCCAACTCACTGGTGCTTCAGCTACTGCTGGCCCAGAGCGCGGCTCATCGCCAGGCCTCG
CACGAGCCTGAAGCGGGCACTGAAGTCGCGCAGCAGTATTACACCGAGTCGCTGCGCCTGTTCCGGAACGTCGTC
GGCGATTTTGTCTCGGGCAAGGAGGATCACACACTGACGCTGACTGTGGGCAGCCTCATCCTCTGTCTCACCGAG
GTGGCGCGTGGCGACGTCTACGGCTCTATCCTTGATCATCTCTCGGCGTCACGGGCACTCCTGACGATGCTGCTG
GAACGTCCAGAACTCTCAGGCGACCTGGTAGACTTTCTGGTCGAATTCTACATGCACACAGTGGCCTCGAGCATC
ATCGCCACCGATCCGCGCGGCTCTCGGCAGCCTCCTCTCAGCCCCGGCATCGAGCACACGGCCCGGGCGCTGGTG
GCGCGGCGGTACATCGGTCAGCTATGTGGCTGTTGGCTGGAACTGTTGCTGCTGATCCCGCAGGTCTTTCAGCTC
GGTCAGGCCCTGCTGCCGGCGGCCGAAGCCGGGACCGGGACCGGGACCGGGACCGGAGCCGGAGCCGGAGCCGGA
GCCGGAGACTCAGATGAGACGACTCAACTGCCAACGGCCGACGACATCATCACCTTTGGCTTCCTCCAGTCGCAG
ATCCTCGCCTTCTACCCGCCCGCCGGCGCCAGCTTATACAGCCAGCTGGCCGGTCTGGTCTTCAAGCAGGGCGCC
TTGCTCTACCTATGGAGCATCCTGGGCTCGCCGGGGCCCAACTCGGCTCTGGCCGACCTCATCGACGGCGCCGTA
GCCGAGGCGGCCTCTCTTCTAGGCCAGTTTCCGGCCTCGGTCCGTGTCAATACCAGCCTCTGCTGGCCGCTGGCC
GTCATCGGCTGCTGCACTCCGGACCCGATCATTCGCGACATGCTGCGCGAGCGGCTGCAGACGATGATTGAGACG
TTTGGCCTGGGCAACATGCGGGAGACGCTGGCTCTGCTGGAGCACGTCTGGAGGCAAACGGCCGAGGAGACGAGT
CCGTGGACGCTGCATAGGTCGATGAGGGAGCACCAGATATGGATATCTTTTGCC
Transcript >Ophio5|6920
ATGTCGGGCTTGTCCTTGGCTGCTTCGGCCGCGGCGCAACAGCAGATTCGCGAAAAGAGCTCGTCATTGATGATT
GGTGGTGGAGAGTGTTTGGAGCCTGCCTGTGTGCCTTCGAGGGTGGTGCCGCTCTCGGCGACCCCGGAGCAGCAG
CAGCAGCAGCAGCAGCGTCATCTGTATCAACATTCTTATGTCCATCACCATAACCATCAACGACAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTTCAGCAACAACAGCTTCAGCAACACCATCGTCAGCATCAAAAT
CACTTTCAGACCTCCCCTGTCGAACCTCCTTCTATCCCAGAGTCAGCTCCGGGTCGACGCCGCTCCTCGTCAACT
ACCAGCCCTTTTGCTCCGGCTGACGAGCACGTCGACGCCGCCGCCGTTGAAGCGGGCGAAGAACACAGCTCGACT
CTCGTTCTGCCCTCAACATCGTCCCCCGGGGCCTCTTCGACTCCGTCGCCATCAGCCTCATCGTCTTCGCCGTCG
TCGTCTCCTTCTTCTTCGCCGTCTTCTTCGCCGTCATCATCATCGGCTTCTTCCGCGCCATCTTCGACCTCTTCT
TCATCCGTCTCTCCTTTTCCTCCCATCGCCATCTCCGCCATCCAATCCAACGAGAGCCAGCAGCAGGCTCAGCAA
GCTCAGCACCAGCAAGGCATCGATATGCCTGTCGCTCTTCTCCCCGCCCACGGCCACGGTTCTTACGAGCTGCTC
AGCTACTATCTTTCCCGAACGGCCGACAGCATGGGCAACGGCTCGACCGAAGTCAACCCCTTTATCGCCAAGCTC
GTGCCCATAGCCTTTTCCAACTCACTGGTGCTTCAGCTACTGCTGGCCCAGAGCGCGGCTCATCGCCAGGCCTCG
CACGAGCCTGAAGCGGGCACTGAAGTCGCGCAGCAGTATTACACCGAGTCGCTGCGCCTGTTCCGGAACGTCGTC
GGCGATTTTGTCTCGGGCAAGGAGGATCACACACTGACGCTGACTGTGGGCAGCCTCATCCTCTGTCTCACCGAG
GTGGCGCGTGGCGACGTCTACGGCTCTATCCTTGATCATCTCTCGGCGTCACGGGCACTCCTGACGATGCTGCTG
GAACGTCCAGAACTCTCAGGCGACCTGGTAGACTTTCTGGTCGAATTCTACATGCACACAGTGGCCTCGAGCATC
ATCGCCACCGATCCGCGCGGCTCTCGGCAGCCTCCTCTCAGCCCCGGCATCGAGCACACGGCCCGGGCGCTGGTG
GCGCGGCGGTACATCGGTCAGCTATGTGGCTGTTGGCTGGAACTGTTGCTGCTGATCCCGCAGGTCTTTCAGCTC
GGTCAGGCCCTGCTGCCGGCGGCCGAAGCCGGGACCGGGACCGGGACCGGGACCGGAGCCGGAGCCGGAGCCGGA
GCCGGAGACTCAGATGAGACGACTCAACTGCCAACGGCCGACGACATCATCACCTTTGGCTTCCTCCAGTCGCAG
ATCCTCGCCTTCTACCCGCCCGCCGGCGCCAGCTTATACAGCCAGCTGGCCGGTCTGGTCTTCAAGCAGGGCGCC
TTGCTCTACCTATGGAGCATCCTGGGCTCGCCGGGGCCCAACTCGGCTCTGGCCGACCTCATCGACGGCGCCGTA
GCCGAGGCGGCCTCTCTTCTAGGCCAGTTTCCGGCCTCGGTCCGTGTCAATACCAGCCTCTGCTGGCCGCTGGCC
GTCATCGGCTGCTGCACTCCGGACCCGATCATTCGCGACATGCTGCGCGAGCGGCTGCAGACGATGATTGAGACG
TTTGGCCTGGGCAACATGCGGGAGACGCTGGCTCTGCTGGAGCACGTCTGGAGGCAAACGGCCGAGGAGACGAGT
CCGTGGACGCTGCATAGGTCGATGAGGGAGCACCAGATATGGATATCTTTTGCCTGA
Gene >Ophio5|6920
ATGTCGGGCTTGTCCTTGGCTGCTTCGGCCGCGGCGCAACAGCAGATTCGCGAAAAGAGCTCGTCATTGATGATT
GGTGGTGGAGAGTGTTTGGAGCCTGCCTGTGTGCCTTCGAGGGTGGTGCCGCTCTCGGCGACCCCGGAGCAGCAG
CAGCAGCAGCAGCAGCGTCATCTGTATCAACATTCTTATGTCCATCACCATAACCATCAACGACAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTTCAGCAACAACAGCTTCAGCAACACCATCGTCAGCATCAAAAT
CACTTTCAGACCTCCCCTGTCGAACCTCCTTCTATCCCAGAGTCAGCTCCGGGTCGACGCCGCTCCTCGTCAACT
ACCAGCCCTTTTGCTCCGGCTGACGAGCACGTCGACGCCGCCGCCGTTGAAGCGGGCGAAGAACACAGCTCGACT
CTCGTTCTGCCCTCAACATCGTCCCCCGGGGCCTCTTCGACTCCGTCGCCATCAGCCTCATCGTCTTCGCCGTCG
TCGTCTCCTTCTTCTTCGCCGTCTTCTTCGCCGTCATCATCATCGGCTTCTTCCGCGCCATCTTCGACCTCTTCT
TCATCCGTCTCTCCTTTTCCTCCCATCGCCATCTCCGCCATCCAATCCAACGAGAGCCAGCAGCAGGCTCAGCAA
GCTCAGCACCAGCAAGGCATCGATATGCCTGTCGCTCTTCTCCCCGCCCACGGCCACGGTTCTTACGAGCTGCTC
AGCTACTATCTTTCCCGAACGGCCGACAGCATGGGCAACGGCTCGACCGAAGTCAACCCCTTTATCGCCAAGCTC
GTGCCCATAGCCTTTTCCAACTCACTGGTGCTTCAGCTACTGCTGGCCCAGAGCGCGGCTCATCGCCAGGCCTCG
CACGAGCCTGAAGCGGGCACTGAAGTCGCGCAGCAGTATTACACCGAGTCGCTGCGCCTGTTCCGGAACGTCGTC
GGCGATTTTGTCTCGGGCAAGGAGGATCACACACTGACGCTGACTGTGGGCAGCCTCATCCTCTGTCTCACCGAG
GTCTGTCGCAATTACAGTCACTTTGTGGTCGAGGCTGACGCTTGGTCATATACACATTGATAATATATAGGTGGC
GCGTGGCGACGTCTACGGCTCTATCCTTGATCATCTCTCGGCGTCACGGGCACTCCTGACGATGCTGCTGGAACG
TCCAGAACTCTCAGGCGACCTGGTAGACTTTCTGGTCGAATTCTACATGCACACAGTGGCCTCGAGCATCATCGC
CACCGATCCGCGCGGCTCTCGGCAGCCTCCTCTCAGCCCCGGCATCGAGCACACGGCCCGGGCGCTGGTGGCGCG
GCGGTACATCGGTCAGCTATGTGGCTGTTGGCTGGAACTGTTGCTGCTGATCCCGCAGGTCTTTCAGCTCGGTCA
GGCCCTGCTGCCGGCGGCCGAAGCCGGGACCGGGACCGGGACCGGGACCGGAGCCGGAGCCGGAGCCGGAGCCGG
AGACTCAGATGAGACGACTCAACTGCCAACGGCCGACGACATCATCACCTTTGGCTTCCTCCAGTCGCAGATCCT
CGCCTTCTACCCGCCCGCCGGCGCCAGCTTATACAGCCAGCTGGCCGGTCTGGTCTTCAAGCAGGGCGCCTTGCT
CTACCTATGGAGCATCCTGGGCTCGCCGGGGCCCAACTCGGCTCTGGCCGACCTCATCGACGGCGCCGTAGCCGA
GGCGGCCTCTCTTCTAGGCCAGTTTCCGGCCTCGGTCCGTGTCAATACCAGCCTCTGCTGGCCGCTGGCCGTCAT
CGGCTGCTGCACTCCGGACCCGATCATTCGCGACATGCTGCGCGAGCGGCTGCAGACGATGATTGAGACGTTTGG
CCTGGGCAACATGCGGGAGACGCTGGCTCTGCTGGAGCACGTCTGGAGGCAAACGGCCGAGGAGACGAGTCCGTG
GACGCTGCATAGGTCGATGAGGGAGCACCAGATATGGATATCTTTTGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail