Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6910
Gene name
Locationscaffold_63:23884..24862
Strand+
Gene length (bp)978
Transcript length (bp)978
Coding sequence length (bp)975
Protein length (aa) 325

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00722 Glyco_hydro_16 Glycosyl hydrolases family 16 4.2E-08 95 264

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P23903|E13B_BACCI Glucan endo-1,3-beta-glucosidase A1 OS=Bacillus circulans GN=glcA PE=1 SV=1 52 323 8.0E-09
sp|P45798|GUB_RHOMR Beta-glucanase OS=Rhodothermus marinus GN=bglA PE=1 SV=1 58 323 9.0E-08
sp|Q9ZG90|KSBGL_SPHMU Keratan-sulfate endo-1,4-beta-galactosidase OS=Sphingobacterium multivorum PE=1 SV=1 145 323 2.0E-07

GO

GO Term Description Terminal node
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0016787 hydrolase activity No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0003824 catalytic activity No
GO:0008150 biological_process No
GO:0003674 molecular_function No
GO:0008152 metabolic process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 27 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6910
MYSTLVAWHCRYLCFLFFSLLCHVHTARQTSSETVATSREDDSSVIAEGFSRCLFYDDFSGPSVGSLPSTAKWTT
VRGTSYPEGPANWGTGEVQTYTQDESNIQVTDDSTLLITPTRQADGTWTSSRIETTADWDFGCQPGRRVRVEAKI
KLGDDSQTEQLGIWPAFWALGAGFRGHPWSWPAIGEIDVMETANGESTMRHAVHCGVAPGGPCGEFSGIGNATES
IDRGEWHVFAWEVDRRFGEGFELLTWLVDDYQRWSLEKPTVKDESAWKVLVEGEKMLLLNVAVGGALPDALAGST
TPNDDTVGGRGASMEVDYVAVYEGG
Coding >Ophio5|6910
ATGTACTCTACTTTGGTGGCATGGCACTGCCGATATTTATGCTTCCTATTCTTCTCTTTGCTCTGCCATGTGCAC
ACGGCTCGCCAAACCAGTAGTGAGACGGTCGCTACGTCTCGGGAAGATGATAGCTCGGTGATTGCGGAAGGCTTC
TCTCGTTGTCTATTCTACGACGACTTCTCCGGCCCATCCGTCGGATCACTGCCGTCGACAGCCAAATGGACTACT
GTCCGAGGCACGTCATATCCCGAGGGGCCTGCGAATTGGGGCACCGGCGAAGTACAAACATACACGCAAGACGAA
AGCAATATTCAAGTGACAGACGACAGCACATTGCTCATCACGCCGACGCGCCAGGCAGACGGGACATGGACCTCT
TCACGCATAGAGACAACGGCAGACTGGGACTTTGGCTGCCAGCCAGGCCGTCGAGTACGCGTCGAGGCCAAGATC
AAGCTGGGGGACGACTCGCAGACGGAGCAGCTGGGCATCTGGCCGGCCTTCTGGGCACTCGGGGCCGGCTTTCGC
GGACACCCCTGGAGCTGGCCGGCCATCGGCGAGATTGATGTCATGGAGACGGCAAATGGAGAGTCGACGATGCGG
CACGCGGTGCACTGCGGCGTCGCTCCGGGCGGACCGTGCGGCGAATTCTCCGGCATCGGCAACGCAACCGAGTCC
ATTGACCGCGGCGAATGGCACGTCTTTGCGTGGGAAGTCGACCGGCGATTTGGGGAGGGGTTCGAGCTCCTAACG
TGGCTCGTCGACGACTATCAGCGGTGGAGCTTGGAGAAGCCGACGGTGAAAGACGAAAGCGCCTGGAAGGTTCTC
GTCGAGGGCGAGAAGATGCTTCTCCTCAACGTCGCGGTGGGAGGAGCGCTTCCGGATGCGCTGGCTGGTAGCACA
ACGCCGAATGACGACACGGTTGGCGGTCGTGGGGCAAGCATGGAGGTTGACTATGTAGCCGTGTATGAGGGGGGC
Transcript >Ophio5|6910
ATGTACTCTACTTTGGTGGCATGGCACTGCCGATATTTATGCTTCCTATTCTTCTCTTTGCTCTGCCATGTGCAC
ACGGCTCGCCAAACCAGTAGTGAGACGGTCGCTACGTCTCGGGAAGATGATAGCTCGGTGATTGCGGAAGGCTTC
TCTCGTTGTCTATTCTACGACGACTTCTCCGGCCCATCCGTCGGATCACTGCCGTCGACAGCCAAATGGACTACT
GTCCGAGGCACGTCATATCCCGAGGGGCCTGCGAATTGGGGCACCGGCGAAGTACAAACATACACGCAAGACGAA
AGCAATATTCAAGTGACAGACGACAGCACATTGCTCATCACGCCGACGCGCCAGGCAGACGGGACATGGACCTCT
TCACGCATAGAGACAACGGCAGACTGGGACTTTGGCTGCCAGCCAGGCCGTCGAGTACGCGTCGAGGCCAAGATC
AAGCTGGGGGACGACTCGCAGACGGAGCAGCTGGGCATCTGGCCGGCCTTCTGGGCACTCGGGGCCGGCTTTCGC
GGACACCCCTGGAGCTGGCCGGCCATCGGCGAGATTGATGTCATGGAGACGGCAAATGGAGAGTCGACGATGCGG
CACGCGGTGCACTGCGGCGTCGCTCCGGGCGGACCGTGCGGCGAATTCTCCGGCATCGGCAACGCAACCGAGTCC
ATTGACCGCGGCGAATGGCACGTCTTTGCGTGGGAAGTCGACCGGCGATTTGGGGAGGGGTTCGAGCTCCTAACG
TGGCTCGTCGACGACTATCAGCGGTGGAGCTTGGAGAAGCCGACGGTGAAAGACGAAAGCGCCTGGAAGGTTCTC
GTCGAGGGCGAGAAGATGCTTCTCCTCAACGTCGCGGTGGGAGGAGCGCTTCCGGATGCGCTGGCTGGTAGCACA
ACGCCGAATGACGACACGGTTGGCGGTCGTGGGGCAAGCATGGAGGTTGACTATGTAGCCGTGTATGAGGGGGGC
TGA
Gene >Ophio5|6910
ATGTACTCTACTTTGGTGGCATGGCACTGCCGATATTTATGCTTCCTATTCTTCTCTTTGCTCTGCCATGTGCAC
ACGGCTCGCCAAACCAGTAGTGAGACGGTCGCTACGTCTCGGGAAGATGATAGCTCGGTGATTGCGGAAGGCTTC
TCTCGTTGTCTATTCTACGACGACTTCTCCGGCCCATCCGTCGGATCACTGCCGTCGACAGCCAAATGGACTACT
GTCCGAGGCACGTCATATCCCGAGGGGCCTGCGAATTGGGGCACCGGCGAAGTACAAACATACACGCAAGACGAA
AGCAATATTCAAGTGACAGACGACAGCACATTGCTCATCACGCCGACGCGCCAGGCAGACGGGACATGGACCTCT
TCACGCATAGAGACAACGGCAGACTGGGACTTTGGCTGCCAGCCAGGCCGTCGAGTACGCGTCGAGGCCAAGATC
AAGCTGGGGGACGACTCGCAGACGGAGCAGCTGGGCATCTGGCCGGCCTTCTGGGCACTCGGGGCCGGCTTTCGC
GGACACCCCTGGAGCTGGCCGGCCATCGGCGAGATTGATGTCATGGAGACGGCAAATGGAGAGTCGACGATGCGG
CACGCGGTGCACTGCGGCGTCGCTCCGGGCGGACCGTGCGGCGAATTCTCCGGCATCGGCAACGCAACCGAGTCC
ATTGACCGCGGCGAATGGCACGTCTTTGCGTGGGAAGTCGACCGGCGATTTGGGGAGGGGTTCGAGCTCCTAACG
TGGCTCGTCGACGACTATCAGCGGTGGAGCTTGGAGAAGCCGACGGTGAAAGACGAAAGCGCCTGGAAGGTTCTC
GTCGAGGGCGAGAAGATGCTTCTCCTCAACGTCGCGGTGGGAGGAGCGCTTCCGGATGCGCTGGCTGGTAGCACA
ACGCCGAATGACGACACGGTTGGCGGTCGTGGGGCAAGCATGGAGGTTGACTATGTAGCCGTGTATGAGGGGGGC
TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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