Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6903
Gene name
Locationscaffold_63:1435..3300
Strand-
Gene length (bp)1865
Transcript length (bp)1446
Coding sequence length (bp)1443
Protein length (aa) 481

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 94 113 19
2 130 147 17
3 181 203 22
4 216 238 22
5 264 286 22
6 298 320 22
7 330 352 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6903
MPLPAAETFISFPHLHLWEEPLDPSSYQLSLLAEKGSLSRSANGSANQIRRLLILGQSSGLDRHHCCPTLFVAQR
SLGKGGGGTKKMDFKTSLAIESWILYALGVVIVGCRLVSRRIKLGKWRAIMIDDYLMIFALINFTGVVVSINDVA
KNGSNYMPPEEAASLSPQQVRMAIHGSIMTFVLEIFTLTAIWTVKACLLILYARLTSNTMTRQHTLVKIAAVYCA
LTYILVTLMFIFFWCRPTYEYWAVPVRIMQCATYYHHMIFTTACNISSDLLLLFIPIPIIIKTRLPAKKKAILCL
ILGLGVFNILAAILNRYYNFSTPNSYVFLYWYVAEVGIAVTVGNLPLCWPILRLVLGNTEETKTPSYHGETISGS
NRRKRRRDPLGTVGTTVMGTNWDKLEEQECTGPASDASQTQRPGSEQGSQIELVLQGQKHNHLHNMAVSVEEAET
QELQKSGSTATGTDELIMVTKPVDVSSQSPR
Coding >Ophio5|6903
ATGCCGCTCCCCGCAGCAGAAACCTTCATCTCGTTCCCTCACCTTCATCTGTGGGAAGAGCCTCTTGATCCTTCG
TCGTACCAATTGAGTCTGCTCGCCGAAAAAGGCTCCCTCTCGAGGAGCGCAAACGGTTCCGCAAATCAGATCCGA
CGGCTCCTCATTCTGGGTCAGTCATCTGGACTTGACCGTCACCATTGTTGCCCGACCCTCTTCGTCGCACAAAGA
TCTTTGGGGAAAGGGGGGGGGGGGACCAAAAAAATGGACTTCAAAACGTCTCTGGCCATCGAGTCGTGGATCCTC
TACGCTCTGGGCGTTGTCATCGTCGGCTGCCGTCTCGTGTCGCGCCGAATCAAGCTCGGCAAATGGAGAGCCATC
ATGATAGACGACTATCTCATGATCTTTGCTCTGATCAACTTCACCGGAGTCGTCGTCTCTATCAACGACGTGGCT
AAGAATGGCAGCAATTACATGCCGCCCGAGGAGGCGGCGTCCCTTTCGCCGCAACAAGTCCGCATGGCTATACAC
GGCAGCATCATGACCTTTGTCCTTGAGATCTTCACCTTGACGGCTATCTGGACCGTCAAGGCCTGCCTTCTGATT
CTTTACGCCCGGCTCACGAGCAATACGATGACGAGGCAGCACACGCTCGTCAAGATTGCGGCAGTCTATTGCGCG
CTCACCTATATCCTCGTCACCCTGATGTTCATATTCTTCTGGTGCAGGCCTACCTACGAGTACTGGGCCGTGCCG
GTCAGGATCATGCAATGCGCCACATATTACCACCACATGATATTTACCACGGCTTGCAACATCTCGTCCGATCTT
CTCCTCCTCTTCATCCCGATTCCCATCATCATCAAGACGCGCCTGCCGGCCAAGAAGAAAGCCATTCTTTGTCTC
ATTCTCGGTCTTGGCGTCTTCAATATCCTTGCCGCCATTCTCAACCGATATTACAACTTCAGCACGCCCAACTCT
TACGTCTTCCTTTACTGGTACGTAGCCGAAGTGGGCATCGCCGTCACGGTGGGCAATCTGCCTCTCTGCTGGCCG
ATCCTACGACTGGTGCTGGGCAACACGGAAGAGACCAAGACGCCGTCGTACCACGGCGAAACGATCAGCGGCAGC
AATCGCCGAAAGCGACGTCGAGATCCACTGGGCACGGTGGGCACGACCGTCATGGGGACCAATTGGGACAAGCTG
GAGGAACAGGAATGCACAGGCCCGGCGAGCGACGCGTCGCAGACGCAACGGCCCGGGTCGGAGCAGGGGAGTCAG
ATCGAGTTGGTGCTGCAGGGACAAAAGCATAATCATCTTCACAACATGGCCGTGAGCGTGGAGGAGGCCGAGACG
CAGGAGCTTCAGAAGTCGGGCTCGACGGCGACGGGGACCGACGAACTGATTATGGTGACCAAACCGGTGGACGTT
TCGTCCCAGTCACCTCGA
Transcript >Ophio5|6903
ATGCCGCTCCCCGCAGCAGAAACCTTCATCTCGTTCCCTCACCTTCATCTGTGGGAAGAGCCTCTTGATCCTTCG
TCGTACCAATTGAGTCTGCTCGCCGAAAAAGGCTCCCTCTCGAGGAGCGCAAACGGTTCCGCAAATCAGATCCGA
CGGCTCCTCATTCTGGGTCAGTCATCTGGACTTGACCGTCACCATTGTTGCCCGACCCTCTTCGTCGCACAAAGA
TCTTTGGGGAAAGGGGGGGGGGGGACCAAAAAAATGGACTTCAAAACGTCTCTGGCCATCGAGTCGTGGATCCTC
TACGCTCTGGGCGTTGTCATCGTCGGCTGCCGTCTCGTGTCGCGCCGAATCAAGCTCGGCAAATGGAGAGCCATC
ATGATAGACGACTATCTCATGATCTTTGCTCTGATCAACTTCACCGGAGTCGTCGTCTCTATCAACGACGTGGCT
AAGAATGGCAGCAATTACATGCCGCCCGAGGAGGCGGCGTCCCTTTCGCCGCAACAAGTCCGCATGGCTATACAC
GGCAGCATCATGACCTTTGTCCTTGAGATCTTCACCTTGACGGCTATCTGGACCGTCAAGGCCTGCCTTCTGATT
CTTTACGCCCGGCTCACGAGCAATACGATGACGAGGCAGCACACGCTCGTCAAGATTGCGGCAGTCTATTGCGCG
CTCACCTATATCCTCGTCACCCTGATGTTCATATTCTTCTGGTGCAGGCCTACCTACGAGTACTGGGCCGTGCCG
GTCAGGATCATGCAATGCGCCACATATTACCACCACATGATATTTACCACGGCTTGCAACATCTCGTCCGATCTT
CTCCTCCTCTTCATCCCGATTCCCATCATCATCAAGACGCGCCTGCCGGCCAAGAAGAAAGCCATTCTTTGTCTC
ATTCTCGGTCTTGGCGTCTTCAATATCCTTGCCGCCATTCTCAACCGATATTACAACTTCAGCACGCCCAACTCT
TACGTCTTCCTTTACTGGTACGTAGCCGAAGTGGGCATCGCCGTCACGGTGGGCAATCTGCCTCTCTGCTGGCCG
ATCCTACGACTGGTGCTGGGCAACACGGAAGAGACCAAGACGCCGTCGTACCACGGCGAAACGATCAGCGGCAGC
AATCGCCGAAAGCGACGTCGAGATCCACTGGGCACGGTGGGCACGACCGTCATGGGGACCAATTGGGACAAGCTG
GAGGAACAGGAATGCACAGGCCCGGCGAGCGACGCGTCGCAGACGCAACGGCCCGGGTCGGAGCAGGGGAGTCAG
ATCGAGTTGGTGCTGCAGGGACAAAAGCATAATCATCTTCACAACATGGCCGTGAGCGTGGAGGAGGCCGAGACG
CAGGAGCTTCAGAAGTCGGGCTCGACGGCGACGGGGACCGACGAACTGATTATGGTGACCAAACCGGTGGACGTT
TCGTCCCAGTCACCTCGATGA
Gene >Ophio5|6903
ATGCCGCTCCCCGCAGCAGAAACCTTCATCTCGTTCCCTCACCTTCATCTGTGGGAAGAGCCTCTTGATCCTTCG
TCGTACCAATTGAGTCTGCTCGCCGAAAAAGGCTCCCTCTCGAGGAGCGCAAACGGTTCCGCAAATCAGATCCGA
CGGCTCCTCATTCTGGGTCAGTCATCTGGACTTGACCGTCACCATTGTTGCCCGACCCTCTTCGTCGCACAAAGA
TCGTCAGCCCGGCACTTTGGGCGTTTTCACGACTCCTACATAGCTGAAAAGTTTGGGGAAAGGGGGGGGGGGGAC
CAAAAAAGTTCGCTCGCAGCCTCATGACGACCGACCGCCCATGACTGACGCGACGCTGCGACGATCAAGATGGAC
TTCAAAACGTCTCTGGCCATCGAGTCGTGGATCCTCTACGCTCTGGGCGTTGTCATCGTCGGCTGCCGTCTCGTG
TCGCGCCGAATCAAGCTCGGCAAATGGAGAGCCATCATGATAGACGACTATCTCATGATCTTTGCTCTGGTCCGT
CTTGATCTTGACAAGACGCGTCGTCATATCGTCTCTGACGCCCTACGCAGATCAACTTCACCGGAGTCGTCGTCT
CTATCAACGACGTGGCTAAGAATGGCAGCAATTACATGCCGCCCGAGGAGGCGGCGTCCCTTTCGCCGCAACAAG
TCCGCATGGCTATACACGGCAGCATCATGACCTTTGTCCTTGAGATCTTCACCTTGACGGCTATCTGGACCGTCA
AGGCCTGCCTTCTGATTCTTTACGCCCGGCTCACGTACGTCTCTCAAGGTCGGTCGGTGGCGGCCAACCTCGGTC
TTGTTCGCTGACGCGCGTGGCACTCAATCAGGAGCAATACGATGACGAGGCAGCACACGCTCGTCAAGATTGCGG
CAGTCTATTGCGCGCTCACCTATATCCTCGTCACCCTGATGTTCATATTCTTCTGGTGCAGGCCTACCTACGAGT
ACTGGGCCGTGCCGGTCAGGATCAGTAAGCGATGAGTGGATGGAAAGAAGGGAGCCAAGGGAGTGATTTATCTGG
CTGACTGGTCATCAGTGCAATGCGCCACATATTACCACCACATGATATTTACCACGGCTTGCAACATCTCGTCCG
ATCTTCTCCTCCTCTTCATCCCGATTCCCATCATCATCAAGACGCGCCTGCCGGCCAAGAAGTAAGAATGGTCAC
CTATGCTTTACTCGAGGCGTTCTGGCTAACGACCGACCAGGAAAGCCATTCTTTGTCTCATTCTCGGTCTTGGCG
TCTTCAATGTGAGGGAACCACCCCTTCCCCTGGTCGTATCGGGTCGTCATTCGGCTGACAGCTTTCAGATCCTTG
CCGCCATTCTCAACCGATATTACAACTTCAGCACGCCCAACTCTTACGTCTTCCTTTACTGGTACGTAGCCGAAG
TGGGCATCGCCGTCACGGTGGGCAATCTGCCTCTCTGCTGGCCGATCCTACGACTGGTGCTGGGCAACACGGAAG
AGACCAAGACGCCGTCGTACCACGGCGAAACGATCAGCGGCAGCAATCGCCGAAAGCGACGTCGAGATCCACTGG
GCACGGTGGGCACGACCGTCATGGGGACCAATTGGGACAAGCTGGAGGAACAGGAATGCACAGGCCCGGCGAGCG
ACGCGTCGCAGACGCAACGGCCCGGGTCGGAGCAGGGGAGTCAGATCGAGTTGGTGCTGCAGGGACAAAAGCATA
ATCATCTTCACAACATGGCCGTGAGCGTGGAGGAGGCCGAGACGCAGGAGCTTCAGAAGTCGGGCTCGACGGCGA
CGGGGACCGACGAACTGATTATGGTGACCAAACCGGTGGACGTTTCGTCCCAGTCACCTCGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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