Protein ID | Ophio5|6868 |
Gene name | |
Location | scaffold_621:3241..4684 |
Strand | + |
Gene length (bp) | 1443 |
Transcript length (bp) | 1326 |
Coding sequence length (bp) | 1323 |
Protein length (aa) | 441 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04666 | Glyco_transf_54 | N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region | 2.3E-09 | 81 | 232 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q812F8|MGT4B_MOUSE | Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B OS=Mus musculus GN=Mgat4b PE=2 SV=1 | 84 | 233 | 1.0E-07 |
sp|Q9UQ53|MGT4B_HUMAN | Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B OS=Homo sapiens GN=MGAT4B PE=1 SV=1 | 84 | 233 | 1.0E-06 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 24 | 17 |
2 | 247 | 266 | 19 |
3 | 279 | 301 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|6868 MRLWRLNAVFWLLWLSLVTWFFFNGYDDPSSVFYDARRAYRAPFSNLRVREVEAFLRRAAKRPMPNRTTTTTTMT KTTGRPPLLCVGIPSISRQSEAFVGHAVGSLLDTLSPLERDLIFLVVLLADGDPSMHSAYRQDWLRRLPDEVLVY GDDGVAANSSANFRRLPARGPAERVEKMRLDHAALVETCRARNAPYFALVEDDVVASRDWFVRLRRALSHLESSG RDWIYLRLFYSEFLMGWNAEEWLGYSQVIAAAYGLLILLLLELRRRHRLGSSPGCVFVLALCLWMPAMIGLVFMV GRVSLRRLGPSPPEGVREMPNYGCCAQGLVFPRRHLQGLHDLLASPPFAFAGDQILEDYARDRGLARFALRDSVS HPGASSAEETTNQLPERTTQRFSAGQAVEQLQSIKRCIAPPAHDNRREAYMFHLRFRQFYGLETGG |
Coding | >Ophio5|6868 ATGCGTCTCTGGCGCCTCAACGCCGTCTTCTGGCTCCTCTGGCTGTCTCTCGTCACCTGGTTCTTCTTCAACGGC TACGATGATCCTTCCTCCGTCTTCTACGATGCCCGCCGCGCCTACCGCGCGCCCTTCTCGAACCTACGTGTCCGA GAAGTCGAGGCCTTTCTGAGGCGCGCTGCCAAGAGGCCGATGCCGAACAGGACGACGACGACGACGACGATGACA AAGACGACGGGGCGGCCGCCGCTGCTGTGCGTCGGCATCCCCAGCATCAGTCGTCAGTCTGAGGCTTTTGTCGGT CATGCGGTGGGCAGTTTACTCGATACACTTTCTCCCCTTGAGCGGGACCTCATCTTTCTTGTCGTTCTGCTTGCC GATGGCGATCCGTCTATGCACTCTGCCTATCGACAGGATTGGCTTCGTCGTCTGCCGGATGAGGTTCTCGTCTAT GGTGACGATGGTGTGGCTGCTAACTCGTCGGCTAACTTTCGTCGTCTTCCTGCTCGTGGTCCGGCTGAGCGGGTC GAGAAGATGAGGCTTGATCATGCTGCGCTCGTGGAGACGTGTCGTGCTCGCAACGCACCGTACTTTGCTCTCGTC GAAGATGACGTTGTCGCTTCCCGAGACTGGTTCGTCCGTCTGCGTCGCGCGTTGAGCCACCTTGAGAGCTCAGGC CGAGACTGGATCTACCTTCGTCTCTTCTACTCGGAGTTCCTGATGGGTTGGAATGCCGAGGAGTGGCTCGGCTAC AGTCAGGTCATTGCCGCCGCCTATGGGCTGCTCATCCTGCTGCTTCTCGAGCTACGACGTCGGCACAGGCTCGGT TCCAGCCCGGGCTGCGTCTTCGTCCTGGCCCTCTGCCTCTGGATGCCGGCCATGATCGGGCTCGTCTTCATGGTC GGACGCGTCTCCCTGCGTCGGTTGGGGCCCTCGCCGCCCGAGGGGGTGCGCGAGATGCCGAATTACGGATGCTGC GCTCAGGGGCTCGTCTTCCCCCGTCGTCATCTGCAAGGCCTGCACGACCTGTTGGCCAGCCCGCCTTTTGCCTTT GCCGGGGACCAGATTCTCGAGGATTATGCTCGTGATAGGGGCTTGGCTAGGTTTGCGCTCCGAGACAGTGTCTCA CACCCGGGCGCTTCTTCTGCTGAGGAGACAACCAACCAACTGCCCGAGAGAACAACCCAGCGCTTTTCAGCAGGA CAGGCCGTCGAGCAGTTGCAGAGCATCAAACGTTGCATTGCGCCGCCCGCTCACGACAACAGACGAGAGGCTTAC ATGTTTCATCTACGCTTCCGCCAGTTTTATGGCCTCGAAACCGGCGGA |
Transcript | >Ophio5|6868 ATGCGTCTCTGGCGCCTCAACGCCGTCTTCTGGCTCCTCTGGCTGTCTCTCGTCACCTGGTTCTTCTTCAACGGC TACGATGATCCTTCCTCCGTCTTCTACGATGCCCGCCGCGCCTACCGCGCGCCCTTCTCGAACCTACGTGTCCGA GAAGTCGAGGCCTTTCTGAGGCGCGCTGCCAAGAGGCCGATGCCGAACAGGACGACGACGACGACGACGATGACA AAGACGACGGGGCGGCCGCCGCTGCTGTGCGTCGGCATCCCCAGCATCAGTCGTCAGTCTGAGGCTTTTGTCGGT CATGCGGTGGGCAGTTTACTCGATACACTTTCTCCCCTTGAGCGGGACCTCATCTTTCTTGTCGTTCTGCTTGCC GATGGCGATCCGTCTATGCACTCTGCCTATCGACAGGATTGGCTTCGTCGTCTGCCGGATGAGGTTCTCGTCTAT GGTGACGATGGTGTGGCTGCTAACTCGTCGGCTAACTTTCGTCGTCTTCCTGCTCGTGGTCCGGCTGAGCGGGTC GAGAAGATGAGGCTTGATCATGCTGCGCTCGTGGAGACGTGTCGTGCTCGCAACGCACCGTACTTTGCTCTCGTC GAAGATGACGTTGTCGCTTCCCGAGACTGGTTCGTCCGTCTGCGTCGCGCGTTGAGCCACCTTGAGAGCTCAGGC CGAGACTGGATCTACCTTCGTCTCTTCTACTCGGAGTTCCTGATGGGTTGGAATGCCGAGGAGTGGCTCGGCTAC AGTCAGGTCATTGCCGCCGCCTATGGGCTGCTCATCCTGCTGCTTCTCGAGCTACGACGTCGGCACAGGCTCGGT TCCAGCCCGGGCTGCGTCTTCGTCCTGGCCCTCTGCCTCTGGATGCCGGCCATGATCGGGCTCGTCTTCATGGTC GGACGCGTCTCCCTGCGTCGGTTGGGGCCCTCGCCGCCCGAGGGGGTGCGCGAGATGCCGAATTACGGATGCTGC GCTCAGGGGCTCGTCTTCCCCCGTCGTCATCTGCAAGGCCTGCACGACCTGTTGGCCAGCCCGCCTTTTGCCTTT GCCGGGGACCAGATTCTCGAGGATTATGCTCGTGATAGGGGCTTGGCTAGGTTTGCGCTCCGAGACAGTGTCTCA CACCCGGGCGCTTCTTCTGCTGAGGAGACAACCAACCAACTGCCCGAGAGAACAACCCAGCGCTTTTCAGCAGGA CAGGCCGTCGAGCAGTTGCAGAGCATCAAACGTTGCATTGCGCCGCCCGCTCACGACAACAGACGAGAGGCTTAC ATGTTTCATCTACGCTTCCGCCAGTTTTATGGCCTCGAAACCGGCGGATAA |
Gene | >Ophio5|6868 ATGCGTCTCTGGCGCCTCAACGCCGTCTTCTGGCTCCTCTGGCTGTCTCTCGTCACCTGGTTCTTCTTCAACGGC TACGATGATCCTTCCTCCGTCTTCTACGATGCCCGCCGCGCCTACCGCGCGCCCTTCTCGAACCTACGTGTCCGA GAAGTCGAGGCCTTTCTGAGGCGCGCTGCCAAGAGGCCGATGCCGAACAGGACGACGACGACGACGACGATGACA AAGACGACGGGGCGGCCGCCGCTGCTGTGCGTCGGCATCCCCAGCATCAGTCGTCAGTCTGAGGCTTTTGTCGGT CATGCGGTGGGCAGTTTACTCGATACACTTTCTCCCCTTGAGCGGGACCTCATCTTTCTTGTCGTTCTGCTTGCC GATGGCGATCCGTCTATGCACTCTGCCTATCGACAGGATTGGCTTCGTCGTCTGCCGGATGAGGTTCTCGTCTAT GGTGACGATGGTGTGGCTGCTAACTCGTCGGCTAACTTTCGTCGTCTTCCTGCTCGTGGTCCGGCTGAGCGGGTC GAGAAGATGAGGCTTGATCATGCTGCGCTCGTGGAGACGTGTCGTGCTCGCAACGCACCGTACTTTGCTCTCGTC GAAGATGACGTTGTCGCTTCCCGAGACTGGTTCGTCCGTCTGCGTCGCGCGTTGAGCCACCTTGAGAGCTCAGGC CGAGACTGGATCTACCTTCGTCTCTTCTACTCGGAGTTCCTGATGGGTTGGAATGCCGAGGAGTGGCTCGGCTAC AGTCAGGTCATTGCCGCCGCCTATGGGCTGCTCATCCTGCTGCTTCTCGAGCTACGACGTCGGCACAGGCTCGGT TCCAGCCCGGGCTGCGTCTTCGTCCTGGCCCTCTGCCTCTGGATGCCGGCCATGATCGGGCTCGTCTTCATGGTC GGACGCGTCTCCCTGCGTCGGTTGGGGCCCTCGCCGCCCGAGGGGGTGCGCGAGATGCCGAATTACGGATGCTGC GCTCAGGGGCTCGTCTTCCCCCGTCGTCATCTGCAAGGCCTGCACGACCTGTTGGCCAGCCCGCCTTTTGCCTTT GCCGGGGACCAGATTCTCGAGGATTATGCTCGTGATAGGGGCTTGGCTAGGTGGGCGCTTGAACCCAGTGTCTTG CAGCATGCTGGTCGGAGGCAGTCGTCGGATGGGCCGCGGACTGCAAACGTGTGGAACTTTAGCTTTGAGCGGCTG CAGCGGTCATGATCAAGGTTTGCGCTCCGAGACAGTGTCTCACACCCGGGCGCTTCTTCTGCTGAGGAGACAACC AACCAACTGCCCGAGAGAACAACCCAGCGCTTTTCAGCAGGACAGGCCGTCGAGCAGTTGCAGAGCATCAAACGT TGCATTGCGCCGCCCGCTCACGACAACAGACGAGAGGCTTACATGTTTCATCTACGCTTCCGCCAGTTTTATGGC CTCGAAACCGGCGGATAA |