© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|686 |
| Gene name | |
| Location | scaffold_1189:745..2765 |
| Strand | - |
| Gene length (bp) | 2020 |
| Transcript length (bp) | 1755 |
| Coding sequence length (bp) | 1752 |
| Protein length (aa) | 584 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01545 | Cation_efflux | Cation efflux family | 6.5E-21 | 294 | 487 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6Z7K5|MTP3_ORYSJ | Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 | 281 | 577 | 6.0E-50 |
| sp|Q5NA18|MTP5_ORYSJ | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1 | 272 | 577 | 7.0E-49 |
| sp|Q10PP8|MTP4_ORYSJ | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1 | 293 | 577 | 8.0E-49 |
| sp|Q9LDU0|MTP7_ORYSJ | Metal tolerance protein 7 OS=Oryza sativa subsp. japonica GN=MTP7 PE=2 SV=1 | 292 | 577 | 6.0E-48 |
| sp|Q9M2P2|MTPC3_ARATH | Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2 | 292 | 577 | 7.0E-46 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6Z7K5|MTP3_ORYSJ | Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 | 281 | 577 | 6.0E-50 |
| sp|Q5NA18|MTP5_ORYSJ | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1 | 272 | 577 | 7.0E-49 |
| sp|Q10PP8|MTP4_ORYSJ | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1 | 293 | 577 | 8.0E-49 |
| sp|Q9LDU0|MTP7_ORYSJ | Metal tolerance protein 7 OS=Oryza sativa subsp. japonica GN=MTP7 PE=2 SV=1 | 292 | 577 | 6.0E-48 |
| sp|Q9M2P2|MTPC3_ARATH | Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2 | 292 | 577 | 7.0E-46 |
| sp|Q9SAJ7|MTP9_ARATH | Metal tolerance protein 9 OS=Arabidopsis thaliana GN=MTP9 PE=2 SV=2 | 292 | 580 | 1.0E-44 |
| sp|Q0WU02|MTP10_ARATH | Metal tolerance protein 10 OS=Arabidopsis thaliana GN=MTP10 PE=2 SV=1 | 292 | 577 | 3.0E-43 |
| sp|O80632|MTP11_ARATH | Metal tolerance protein 11 OS=Arabidopsis thaliana GN=MTP11 PE=2 SV=1 | 272 | 577 | 5.0E-42 |
| sp|Q0DHJ5|MTP6_ORYSJ | Metal tolerance protein 6 OS=Oryza sativa subsp. japonica GN=MTP6 PE=2 SV=2 | 272 | 577 | 9.0E-35 |
| sp|P21559|P34_RICRS | Protein p34 OS=Rickettsia rickettsii (strain Sheila Smith) GN=p34 PE=3 SV=1 | 282 | 552 | 1.0E-05 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0008324 | cation transmembrane transporter activity | Yes |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0006810 | transport | No |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0051234 | establishment of localization | No |
| GO:0009987 | cellular process | No |
| GO:0006811 | ion transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 291 | 313 | 22 |
| 2 | 361 | 383 | 22 |
| 3 | 398 | 420 | 22 |
| 4 | 441 | 460 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|686 MASPASKPRPIRRPSLLSLDDGYLHYPLTTRTGALASLIRNRSSHQSLAGSWPPPSAHRHYHAVDDEEARHDEDD IERLLRDGTRLSQILKGPQVRSMNLIGKSNPRYRWDTYWKTDEELQVMDKPLRNYYHRTNDLIQQYMYIDCLLDS SIPHDLLNEYSAELEASAFRPIDVPATINEEPTLTSSLADSVDLQHSYGSVTPPASSLPTLPQKRTPKDIFRSSE SMPLLLHDDDGVDENDESDDDAKNRIRNDARRPPAPRTPHNGDDGPKPILPWLEDGDVDSDDPVVTVAIWINLVA NLVLLIGKIVVIISVPSMSVLASLVDATLDFLSTAIVWTTTRLISSGQKDQYRYPVGRRRLEPLGVLVFSVIMVT SFVQVALQCIQRLLSPDHQILELGAPAIIIMISTVVIKGACWLWCRLIKNSGVRALAEDAKTDVIFNIGSILFPI IGFYGRVWWLDALGGLLLSFVVIFTWSQTSAHHVRNLTGHSAQPDERNLLLYLTMRFATAIRQIQNLRAYHAGDK LFVEVDIVLSAITPLKDSHDLSEVLTYFLESVPIVDRAFVHVDYTSYNAPTHISKQSPA |
| Coding | >Ophio5|686 ATGGCTTCTCCCGCGTCGAAGCCGCGTCCCATTCGGAGGCCGTCGCTGCTCTCCCTAGACGACGGTTACTTGCAC TATCCGCTGACGACGCGGACCGGCGCCCTCGCCTCGCTGATCCGCAACCGGTCCTCGCACCAGAGCTTGGCAGGT TCGTGGCCGCCGCCCTCGGCTCACAGGCACTACCACGCCGTCGACGATGAGGAAGCTCGTCACGATGAGGACGAT ATCGAGAGGTTGCTGCGTGATGGAACGCGTCTCAGCCAGATTCTCAAGGGTCCGCAGGTCCGCAGCATGAACCTC ATCGGGAAGAGCAACCCTCGGTATCGCTGGGACACATACTGGAAGACGGACGAGGAGCTTCAGGTTATGGATAAG CCGCTCCGCAACTACTACCACCGCACAAACGACCTCATCCAGCAGTACATGTACATCGACTGCCTCCTCGACTCG TCCATCCCGCATGACCTCCTAAACGAATACTCGGCCGAGCTCGAGGCCTCGGCCTTTCGCCCCATCGACGTGCCC GCCACCATCAACGAGGAGCCGACTCTGACCTCGTCCCTCGCCGACTCGGTCGACCTCCAGCACTCGTATGGCTCC GTCACACCTCCGGCCTCCTCGCTGCCCACGCTGCCGCAGAAGCGGACGCCAAAGGATATCTTCCGCTCTTCCGAG AGCATGCCTTTACTGCTACACGACGACGACGGCGTCGACGAAAACGATGAAAGCGACGATGATGCCAAAAACAGG ATTCGCAACGATGCCCGCCGTCCTCCCGCGCCTCGTACCCCGCACAACGGCGACGACGGGCCAAAGCCTATCCTG CCGTGGCTCGAGGACGGTGATGTCGACAGCGACGATCCTGTCGTCACCGTCGCCATCTGGATCAACCTCGTCGCC AACCTCGTCCTCCTCATCGGCAAAATCGTCGTCATCATCTCCGTCCCCTCCATGTCCGTCCTGGCCAGTCTCGTC GACGCTACCCTCGATTTTCTCAGCACTGCCATCGTCTGGACCACCACCCGCCTCATCTCCTCCGGTCAGAAGGAC CAGTACCGCTATCCTGTCGGCCGCCGCCGCCTCGAGCCCCTCGGCGTCCTCGTCTTCTCCGTCATCATGGTGACG AGTTTCGTTCAGGTCGCGCTCCAGTGCATACAGCGCCTGCTGAGTCCGGATCACCAGATCCTTGAACTCGGCGCG CCGGCCATCATCATCATGATCAGTACCGTCGTCATCAAGGGGGCCTGCTGGCTTTGGTGCCGGCTCATCAAGAAC TCGGGCGTCCGTGCCTTAGCAGAAGACGCCAAGACAGATGTCATCTTCAACATCGGCTCCATCCTCTTCCCCATT ATCGGCTTCTACGGCCGCGTCTGGTGGCTCGACGCCCTCGGCGGCCTCCTCCTCTCCTTCGTCGTCATCTTCACC TGGAGTCAGACGTCTGCCCATCACGTCCGTAACCTGACGGGCCACTCGGCCCAGCCCGACGAACGCAACCTGCTA CTCTACCTCACCATGCGCTTCGCCACCGCCATCCGCCAGATCCAGAACCTACGCGCCTACCACGCAGGTGACAAG CTCTTCGTCGAGGTCGACATCGTCCTCTCCGCCATCACCCCGCTCAAGGACAGCCACGACCTCAGCGAGGTGCTC ACTTACTTTCTTGAATCTGTCCCCATCGTCGATAGGGCCTTTGTCCACGTTGATTATACCAGTTATAACGCGCCC ACCCACATATCCAAGCAGTCCCCGGCC |
| Transcript | >Ophio5|686 ATGGCTTCTCCCGCGTCGAAGCCGCGTCCCATTCGGAGGCCGTCGCTGCTCTCCCTAGACGACGGTTACTTGCAC TATCCGCTGACGACGCGGACCGGCGCCCTCGCCTCGCTGATCCGCAACCGGTCCTCGCACCAGAGCTTGGCAGGT TCGTGGCCGCCGCCCTCGGCTCACAGGCACTACCACGCCGTCGACGATGAGGAAGCTCGTCACGATGAGGACGAT ATCGAGAGGTTGCTGCGTGATGGAACGCGTCTCAGCCAGATTCTCAAGGGTCCGCAGGTCCGCAGCATGAACCTC ATCGGGAAGAGCAACCCTCGGTATCGCTGGGACACATACTGGAAGACGGACGAGGAGCTTCAGGTTATGGATAAG CCGCTCCGCAACTACTACCACCGCACAAACGACCTCATCCAGCAGTACATGTACATCGACTGCCTCCTCGACTCG TCCATCCCGCATGACCTCCTAAACGAATACTCGGCCGAGCTCGAGGCCTCGGCCTTTCGCCCCATCGACGTGCCC GCCACCATCAACGAGGAGCCGACTCTGACCTCGTCCCTCGCCGACTCGGTCGACCTCCAGCACTCGTATGGCTCC GTCACACCTCCGGCCTCCTCGCTGCCCACGCTGCCGCAGAAGCGGACGCCAAAGGATATCTTCCGCTCTTCCGAG AGCATGCCTTTACTGCTACACGACGACGACGGCGTCGACGAAAACGATGAAAGCGACGATGATGCCAAAAACAGG ATTCGCAACGATGCCCGCCGTCCTCCCGCGCCTCGTACCCCGCACAACGGCGACGACGGGCCAAAGCCTATCCTG CCGTGGCTCGAGGACGGTGATGTCGACAGCGACGATCCTGTCGTCACCGTCGCCATCTGGATCAACCTCGTCGCC AACCTCGTCCTCCTCATCGGCAAAATCGTCGTCATCATCTCCGTCCCCTCCATGTCCGTCCTGGCCAGTCTCGTC GACGCTACCCTCGATTTTCTCAGCACTGCCATCGTCTGGACCACCACCCGCCTCATCTCCTCCGGTCAGAAGGAC CAGTACCGCTATCCTGTCGGCCGCCGCCGCCTCGAGCCCCTCGGCGTCCTCGTCTTCTCCGTCATCATGGTGACG AGTTTCGTTCAGGTCGCGCTCCAGTGCATACAGCGCCTGCTGAGTCCGGATCACCAGATCCTTGAACTCGGCGCG CCGGCCATCATCATCATGATCAGTACCGTCGTCATCAAGGGGGCCTGCTGGCTTTGGTGCCGGCTCATCAAGAAC TCGGGCGTCCGTGCCTTAGCAGAAGACGCCAAGACAGATGTCATCTTCAACATCGGCTCCATCCTCTTCCCCATT ATCGGCTTCTACGGCCGCGTCTGGTGGCTCGACGCCCTCGGCGGCCTCCTCCTCTCCTTCGTCGTCATCTTCACC TGGAGTCAGACGTCTGCCCATCACGTCCGTAACCTGACGGGCCACTCGGCCCAGCCCGACGAACGCAACCTGCTA CTCTACCTCACCATGCGCTTCGCCACCGCCATCCGCCAGATCCAGAACCTACGCGCCTACCACGCAGGTGACAAG CTCTTCGTCGAGGTCGACATCGTCCTCTCCGCCATCACCCCGCTCAAGGACAGCCACGACCTCAGCGAGGTGCTC ACTTACTTTCTTGAATCTGTCCCCATCGTCGATAGGGCCTTTGTCCACGTTGATTATACCAGTTATAACGCGCCC ACCCACATATCCAAGCAGTCCCCGGCCTAG |
| Gene | >Ophio5|686 ATGGCTTCTCCCGCGTCGAAGCCGCGTCCCATTCGGAGGCCGTCGCTGCTCTCCCTAGACGACGGTTACTTGCAC TATCCGCTGACGACGCGGACCGGCGCCCTCGCCTCGCTGATCCGCAACCGGTCCTCGCACCAGAGCTTGGCAGGT TCGTGGCCGCCGCCCTCGGCTCACAGGCACTACCACGCCGTCGACGATGAGGAAGCTCGTCACGATGAGGACGAT ATCGAGAGGTTGCTGCGTGATGGAACGCGTCTCAGCCAGATTCTCAAGGGTCCGCAGGTCCGCAGCATGAACCTC ATCGGGAAGAGCAACCCTCGGTATCGCTGGGACACATACTGGAAGACGGACGAGGAGCTTCAGGTTATGGATAAG CCGCTGTAAGCTGCTCTCCCCCGTTACCTCACGAGCAACAGGCCCCCAGACGCTGATGCTGGTGCTCGTTGGTGC TACCCAGCCGCAACTACTACCACCGCACAAACGACCTCATCCAGCAGTACATGTACATCGACTGCCTCCTCGACT CGTCCATCCCGCATGACCTCCTAAACGAATACTCGGCCGAGCTCGAGGCCTCGGCCTTTCGCCCCATCGACGTGC CCGCCACCATCAACGAGGAGCCGACTCTGACCTCGTCCCTCGCCGACTCGGTCGACCTCCAGCACTCGTATGGCT CCGTCACACCTCCGGCCTCCTCGCTGCCCACGCTGCCGCAGAAGCGGACGCCAAAGGATATCTTCCGCTCTTCCG AGAGCATGCCTTTACTGCTACACGACGACGACGGCGTCGACGAAAACGATGAAAGCGACGATGATGCCAAAAACA GGATTCGCAACGATGCCCGCCGTCCTCCCGCGCCTCGTACCCCGCACAACGGCGACGACGGGCCAAAGCCTATCC TGCCGTGGCTCGAGGACGGTGATGTCGACAGCGACGATCCTGTCGTCACCGTCGCCATCTGGATCAACCTCGTCG CCAACCTCGTCCTCCTCATCGGCAAAATCGTCGTCATCATCTCCGTCCCCTCCATGTCCGTCCTGGCCAGTCTCG TCGACGCTACCCTCGATTTTCTCAGCACTGCCATCGTCTGGACCACCACCCGCCTCATCTCCTCCGGTCAGAAGG ACCAGTACCGCTATCCTGTCGGCCGCCGCCGGTGAGAGCCGTGTCGAATGACCCTCGCTGTCCTTGTTTCTGACT CTTTACTGCAGCCTCGAGCCCCTCGGCGTCCTCGTCTTCTCCGTCATCATGGTGACGAGTTTCGTTCAGGTCGCG CTCCAGTGCATACAGCGCCTGCTGAGTCCGGATCACCAGATCCTTGAACTCGGCGCGCCGGCCATCATCATCATG ATCAGTACCGTCGTCATCAAGGGGGCCTGCTGGCTTTGGTGCCGGCTCATCAAGAACTCGGGCGTCCGTGCCTTG TACGTCCCTCCTCCTCCTCCCCCTTCTTGACCTTTCTGCTGACAACCATTCTAGAGCAGAAGACGCCAAGACAGA TGTCATCTTCAACATCGGCTCCATCCTCTTCCCCATTAGTGAGTCCATCCCCCCCCCCCCCCCCCCACCCTCTCT CTCTTTCTTCACGTCCGCCCCGTCGCTGACGGCCGCCCCAGTCGGCTTCTACGGCCGCGTCTGGTGGCTCGACGC CCTCGGCGGCCTCCTCCTCTCCTTCGTCGTCATCTTCACCTGGAGTCAGACGTCTGCCCATCACGTCCGTAACCT GACGGGCCACTCGGCCCAGCCCGACGAACGCAACCTGCTACTCTACCTCACCATGCGCTTCGCCACCGCCATCCG CCAGATCCAGAACCTACGCGCCTACCACGCAGGTGACAAGCTCTTCGTCGAGGTCGACATCGTCCTCTCCGCCAT CACCCCGCTCAAGGACAGCCACGACCTCAGCGAGGTGCTCACTTACTTTCTTGAATCTGTCCCCATCGTCGATAG GGCCTTTGTCCACGTTGATTATACCAGTTATAACGCGCCCACCCACATATCCAAGCAGTCCCCGGCCTAG |