Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6854
Gene name
Locationscaffold_62:33657..34798
Strand-
Gene length (bp)1141
Transcript length (bp)1032
Coding sequence length (bp)1029
Protein length (aa) 343

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03134 TB2_DP1_HVA22 TB2/DP1, HVA22 family 3.6E-24 18 94

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q5BL63|REEP4_XENTR Receptor expression-enhancing protein 4 OS=Xenopus tropicalis GN=reep4 PE=2 SV=1 15 112 2.0E-19
sp|Q3ZCI8|REEP4_BOVIN Receptor expression-enhancing protein 4 OS=Bos taurus GN=REEP4 PE=2 SV=1 4 112 2.0E-19
sp|Q6AZM3|REEP4_XENLA Receptor expression-enhancing protein 4 OS=Xenopus laevis GN=reep4 PE=1 SV=1 15 112 3.0E-19
sp|Q8VCD6|REEP2_MOUSE Receptor expression-enhancing protein 2 OS=Mus musculus GN=Reep2 PE=1 SV=2 16 112 5.0E-19
sp|Q9BRK0|REEP2_HUMAN Receptor expression-enhancing protein 2 OS=Homo sapiens GN=REEP2 PE=1 SV=2 16 112 5.0E-19
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Swissprot ID Swissprot Description Start End E-value
sp|Q5BL63|REEP4_XENTR Receptor expression-enhancing protein 4 OS=Xenopus tropicalis GN=reep4 PE=2 SV=1 15 112 2.0E-19
sp|Q3ZCI8|REEP4_BOVIN Receptor expression-enhancing protein 4 OS=Bos taurus GN=REEP4 PE=2 SV=1 4 112 2.0E-19
sp|Q6AZM3|REEP4_XENLA Receptor expression-enhancing protein 4 OS=Xenopus laevis GN=reep4 PE=1 SV=1 15 112 3.0E-19
sp|Q8VCD6|REEP2_MOUSE Receptor expression-enhancing protein 2 OS=Mus musculus GN=Reep2 PE=1 SV=2 16 112 5.0E-19
sp|Q9BRK0|REEP2_HUMAN Receptor expression-enhancing protein 2 OS=Homo sapiens GN=REEP2 PE=1 SV=2 16 112 5.0E-19
sp|Q2KI30|REEP2_BOVIN Receptor expression-enhancing protein 2 OS=Bos taurus GN=REEP2 PE=2 SV=1 16 112 6.0E-19
sp|Q4QQW1|REEP4_RAT Receptor expression-enhancing protein 4 OS=Rattus norvegicus GN=Reep4 PE=1 SV=1 4 112 6.0E-19
sp|Q4KMI4|REEP2_DANRE Receptor expression-enhancing protein 2 OS=Danio rerio GN=reep2 PE=2 SV=1 16 112 1.0E-18
sp|Q9H6H4|REEP4_HUMAN Receptor expression-enhancing protein 4 OS=Homo sapiens GN=REEP4 PE=1 SV=1 4 112 2.0E-18
sp|Q5R598|REEP4_PONAB Receptor expression-enhancing protein 4 OS=Pongo abelii GN=REEP4 PE=2 SV=1 4 112 2.0E-18
sp|Q8K072|REEP4_MOUSE Receptor expression-enhancing protein 4 OS=Mus musculus GN=Reep4 PE=1 SV=1 4 112 4.0E-18
sp|Q7ZVX5|REEP3_DANRE Receptor expression-enhancing protein 3 OS=Danio rerio GN=reep3 PE=2 SV=1 16 112 9.0E-18
sp|Q99KK1|REEP3_MOUSE Receptor expression-enhancing protein 3 OS=Mus musculus GN=Reep3 PE=1 SV=1 15 112 2.0E-16
sp|Q6P418|REP3A_XENLA Receptor expression-enhancing protein 3-A OS=Xenopus laevis GN=reep3-a PE=2 SV=1 15 112 3.0E-16
sp|Q6NUK4|REEP3_HUMAN Receptor expression-enhancing protein 3 OS=Homo sapiens GN=REEP3 PE=1 SV=1 15 112 3.0E-16
sp|Q9H902|REEP1_HUMAN Receptor expression-enhancing protein 1 OS=Homo sapiens GN=REEP1 PE=1 SV=1 16 112 5.0E-16
sp|Q8BGH4|REEP1_MOUSE Receptor expression-enhancing protein 1 OS=Mus musculus GN=Reep1 PE=1 SV=1 16 112 5.0E-16
sp|Q10010|YSV4_CAEEL Uncharacterized protein T19C3.4 OS=Caenorhabditis elegans GN=T19C3.4 PE=3 SV=1 16 121 5.0E-16
sp|Q5HZP8|REP3B_XENLA Receptor expression-enhancing protein 3-B OS=Xenopus laevis GN=reep3-b PE=2 SV=1 15 112 6.0E-16
sp|Q8LE10|HA22I_ARATH HVA22-like protein i OS=Arabidopsis thaliana GN=HVA22I PE=2 SV=2 9 151 5.0E-14
sp|Q4P0H0|YOP1_USTMA Protein YOP1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=YOP1 PE=3 SV=1 1 104 1.0E-13
sp|Q6NLY8|HA22K_ARATH HVA22-like protein k OS=Arabidopsis thaliana GN=HVA22K PE=2 SV=1 17 106 5.0E-13
sp|Q66IF1|REEP6_DANRE Receptor expression-enhancing protein 6 OS=Danio rerio GN=reep6 PE=2 SV=1 6 146 8.0E-13
sp|Q8GXE9|HA22J_ARATH HVA22-like protein j OS=Arabidopsis thaliana GN=HVA22J PE=2 SV=2 3 112 8.0E-13
sp|Q8LEM6|HA22H_ARATH HVA22-like protein h OS=Arabidopsis thaliana GN=HVA22H PE=2 SV=2 9 135 2.0E-12
sp|Q6CP93|YOP1_KLULA Protein YOP1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=YOP1 PE=3 SV=1 9 118 3.0E-12
sp|Q75A56|YOP1_ASHGO Protein YOP1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=YOP1 PE=3 SV=2 9 117 4.0E-12
sp|Q12402|YOP1_YEAST Protein YOP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOP1 PE=1 SV=3 9 94 4.0E-12
sp|Q9LR09|HA22G_ARATH Putative HVA22-like protein g OS=Arabidopsis thaliana GN=HVA22G PE=3 SV=2 9 147 1.0E-11
sp|O14355|YB49_SCHPO Uncharacterized membrane protein C30D10.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC30D10.09c PE=3 SV=1 8 128 1.0E-11
sp|Q96HR9|REEP6_HUMAN Receptor expression-enhancing protein 6 OS=Homo sapiens GN=REEP6 PE=1 SV=1 1 124 2.0E-11
sp|B2RZ37|REEP5_RAT Receptor expression-enhancing protein 5 OS=Rattus norvegicus GN=Reep5 PE=1 SV=1 6 134 7.0E-11
sp|Q5RE33|REEP5_PONAB Receptor expression-enhancing protein 5 OS=Pongo abelii GN=REEP5 PE=2 SV=1 6 114 7.0E-11
sp|Q29RM3|REEP5_BOVIN Receptor expression-enhancing protein 5 OS=Bos taurus GN=REEP5 PE=2 SV=1 6 119 9.0E-11
sp|Q871R7|YOP1_NEUCR Protein yop-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=yop-1 PE=3 SV=1 1 95 1.0E-10
sp|Q60870|REEP5_MOUSE Receptor expression-enhancing protein 5 OS=Mus musculus GN=Reep5 PE=1 SV=1 6 134 1.0E-10
sp|Q00765|REEP5_HUMAN Receptor expression-enhancing protein 5 OS=Homo sapiens GN=REEP5 PE=1 SV=3 6 114 1.0E-10
sp|Q9S784|HA22C_ARATH HVA22-like protein c OS=Arabidopsis thaliana GN=HVA22C PE=2 SV=1 2 113 2.0E-10
sp|Q32LG5|REEP6_BOVIN Receptor expression-enhancing protein 6 OS=Bos taurus GN=REEP6 PE=2 SV=1 8 112 3.0E-10
sp|Q4WTW3|YOP1_ASPFU Protein yop1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=yop1 PE=3 SV=1 1 95 3.0E-10
sp|Q6CE07|YOP1_YARLI Protein YOP1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YOP1 PE=3 SV=2 8 97 4.0E-10
sp|Q6BWH8|YOP1_DEBHA Protein YOP1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=YOP1 PE=3 SV=1 9 94 4.0E-10
sp|Q51VY4|YOP1_MAGO7 Protein YOP1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=YOP1 PE=3 SV=2 1 95 2.0E-09
sp|Q5XI60|REEP6_RAT Receptor expression-enhancing protein 6 OS=Rattus norvegicus GN=Reep6 PE=2 SV=1 6 151 2.0E-09
sp|Q9JM62|REEP6_MOUSE Receptor expression-enhancing protein 6 OS=Mus musculus GN=Reep6 PE=1 SV=1 6 144 3.0E-09
sp|Q5BB01|YOP1_EMENI Protein yop1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=yop1 PE=3 SV=1 1 95 3.0E-09
sp|Q682H0|HA22F_ARATH HVA22-like protein f OS=Arabidopsis thaliana GN=HVA22F PE=2 SV=1 13 96 5.0E-09
sp|Q9UU91|YOP1_SCHPO Protein yop1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yop1 PE=1 SV=1 9 104 5.0E-09
sp|Q9S7V4|HA22A_ARATH HVA22-like protein a OS=Arabidopsis thaliana GN=HVA22A PE=2 SV=1 2 93 8.0E-09
sp|Q9SYX7|HA22B_ARATH HVA22-like protein b OS=Arabidopsis thaliana GN=HVA22B PE=2 SV=2 1 95 4.0E-08
sp|Q6FMU3|YOP1_CANGA Protein YOP1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=YOP1 PE=3 SV=1 9 97 5.0E-08
sp|Q9S760|HA22D_ARATH HVA22-like protein d OS=Arabidopsis thaliana GN=HVA22D PE=2 SV=1 3 91 7.0E-08
sp|Q07764|HVA22_HORVU Protein HVA22 OS=Hordeum vulgare GN=HVA22 PE=2 SV=1 13 100 3.0E-07
sp|P0CN16|YOP1_CRYNJ Protein YOP1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=YOP1 PE=3 SV=1 1 95 5.0E-07
sp|P0CN17|YOP1_CRYNB Protein YOP1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=YOP1 PE=3 SV=1 1 95 5.0E-07
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 4 26 22
2 39 61 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 71.27 38.56 103.98
CcL In ants, during behavior modification 47.80 24.28 71.32
CcD In ants, recently dead 67.84 36.52 99.15

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.088664 no
SC16a CcD 0.864630 no
CcL CcD 0.147616 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6854
MFDLFAMFLSSITSFLFPIFASYKALKTSDPAQLTPWLMYWVVFNCCLLAESWVSFILVWIPFYGYIRFFFFLYL
ILPQTQGARTLYEERIHPFLEENEGTIDKFIANTHQRLRAAGSTYLRKVIDYLKTNILGLPRTEQPPPSPPAGPA
GYTQSLLARFSVPTARLPAATYSGNDFYNMLANAVSAAAGGGSRAAPDSAPLIPPDLRGSAEKMSFIAAQRERLN
IVLSALDREAQELQRADGDATPLQHAADLSRDDGEPGRRWSSGTGLSKSRSETDFEKVEAESGDEDGGDGSLRRR
QVPSGSGSGSGSGSGSGGGGGGSWIPWGWAGGASAAKSSSREE
Coding >Ophio5|6854
ATGTTCGACCTCTTTGCCATGTTTCTCTCCTCCATCACCTCGTTTCTCTTCCCCATCTTCGCCTCCTACAAGGCT
CTCAAGACGTCTGACCCGGCCCAGTTGACTCCCTGGCTCATGTACTGGGTCGTCTTCAACTGCTGCCTCCTCGCC
GAATCATGGGTCTCCTTCATTCTTGTCTGGATTCCGTTTTACGGTTACATCCGCTTCTTCTTCTTCCTCTACCTG
ATCCTGCCCCAGACACAGGGCGCGCGCACCCTCTATGAGGAGAGAATCCACCCCTTCCTCGAGGAGAACGAAGGC
ACCATCGACAAATTCATCGCCAACACCCATCAGCGCCTCAGGGCTGCCGGCTCGACCTACCTTCGCAAGGTCATC
GACTACCTCAAGACCAACATCCTCGGCCTGCCTCGCACCGAGCAGCCACCACCTTCTCCTCCGGCCGGCCCCGCC
GGGTACACGCAATCGCTCCTCGCCCGCTTTAGCGTCCCGACGGCGAGGCTACCGGCCGCCACCTATTCCGGCAAC
GACTTTTACAACATGCTGGCCAACGCCGTGTCCGCTGCCGCAGGCGGAGGCAGTCGCGCCGCCCCCGACTCGGCT
CCCCTCATCCCGCCCGATCTGCGCGGTTCGGCCGAGAAGATGAGTTTCATCGCCGCCCAGCGCGAACGCCTCAAC
ATTGTACTGTCGGCCCTCGACCGCGAGGCTCAGGAGCTTCAACGCGCTGACGGCGACGCCACGCCCCTACAACAC
GCCGCCGACCTGAGCCGAGATGACGGCGAGCCCGGCCGGCGGTGGTCGAGCGGTACTGGCCTGAGCAAGAGCCGC
AGCGAGACCGACTTCGAGAAGGTCGAGGCCGAGAGCGGCGATGAGGACGGCGGCGACGGAAGCCTCCGCAGACGC
CAGGTCCCGAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGAGGAGGCGGCGGCGGCTCTTGGATA
CCCTGGGGATGGGCGGGCGGCGCCAGCGCAGCAAAGAGCTCCTCACGGGAGGAA
Transcript >Ophio5|6854
ATGTTCGACCTCTTTGCCATGTTTCTCTCCTCCATCACCTCGTTTCTCTTCCCCATCTTCGCCTCCTACAAGGCT
CTCAAGACGTCTGACCCGGCCCAGTTGACTCCCTGGCTCATGTACTGGGTCGTCTTCAACTGCTGCCTCCTCGCC
GAATCATGGGTCTCCTTCATTCTTGTCTGGATTCCGTTTTACGGTTACATCCGCTTCTTCTTCTTCCTCTACCTG
ATCCTGCCCCAGACACAGGGCGCGCGCACCCTCTATGAGGAGAGAATCCACCCCTTCCTCGAGGAGAACGAAGGC
ACCATCGACAAATTCATCGCCAACACCCATCAGCGCCTCAGGGCTGCCGGCTCGACCTACCTTCGCAAGGTCATC
GACTACCTCAAGACCAACATCCTCGGCCTGCCTCGCACCGAGCAGCCACCACCTTCTCCTCCGGCCGGCCCCGCC
GGGTACACGCAATCGCTCCTCGCCCGCTTTAGCGTCCCGACGGCGAGGCTACCGGCCGCCACCTATTCCGGCAAC
GACTTTTACAACATGCTGGCCAACGCCGTGTCCGCTGCCGCAGGCGGAGGCAGTCGCGCCGCCCCCGACTCGGCT
CCCCTCATCCCGCCCGATCTGCGCGGTTCGGCCGAGAAGATGAGTTTCATCGCCGCCCAGCGCGAACGCCTCAAC
ATTGTACTGTCGGCCCTCGACCGCGAGGCTCAGGAGCTTCAACGCGCTGACGGCGACGCCACGCCCCTACAACAC
GCCGCCGACCTGAGCCGAGATGACGGCGAGCCCGGCCGGCGGTGGTCGAGCGGTACTGGCCTGAGCAAGAGCCGC
AGCGAGACCGACTTCGAGAAGGTCGAGGCCGAGAGCGGCGATGAGGACGGCGGCGACGGAAGCCTCCGCAGACGC
CAGGTCCCGAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGAGGAGGCGGCGGCGGCTCTTGGATA
CCCTGGGGATGGGCGGGCGGCGCCAGCGCAGCAAAGAGCTCCTCACGGGAGGAATAG
Gene >Ophio5|6854
ATGTTCGACCTCTTTGCCATGTTTCTCTCGTTCGTCGCTTCACCCATGGCCACGATGGCTCGCGCGCGCTGACGT
CCTGCAGCTCCATCACCTCGTTTCTCTTCCCCATCTTCGCCTCCTACAAGGCTCTCAAGACGTCTGACCCGGCCC
AGTTGACTCCCTGGCTCATGTACTGGGTCGTCTTCAACTGCTGCCTCCTCGCCGAATCATGGGTCTCCTTCATTC
TTGTCTGGTGCGTCGCCTCGCTTTCATGCGCCGCGCGCCGTCAACTGACCATGCCCTGCCCAGGATTCCGTTTTA
CGGTTACATCCGCTTCTTCTTCTTCCTCTACCTGATCCTGCCCCAGACACAGGGCGCGCGCACCCTCTATGAGGA
GAGAATCCACCCCTTCCTCGAGGAGAACGAAGGCACCATCGACAAATTCATCGCCAACACCCATCAGCGCCTCAG
GGCTGCCGGCTCGACCTACCTTCGCAAGGTCATCGACTACCTCAAGACCAACATCCTCGGCCTGCCTCGCACCGA
GCAGCCACCACCTTCTCCTCCGGCCGGCCCCGCCGGGTACACGCAATCGCTCCTCGCCCGCTTTAGCGTCCCGAC
GGCGAGGCTACCGGCCGCCACCTATTCCGGCAACGACTTTTACAACATGCTGGCCAACGCCGTGTCCGCTGCCGC
AGGCGGAGGCAGTCGCGCCGCCCCCGACTCGGCTCCCCTCATCCCGCCCGATCTGCGCGGTTCGGCCGAGAAGAT
GAGTTTCATCGCCGCCCAGCGCGAACGCCTCAACATTGTACTGTCGGCCCTCGACCGCGAGGCTCAGGAGCTTCA
ACGCGCTGACGGCGACGCCACGCCCCTACAACACGCCGCCGACCTGAGCCGAGATGACGGCGAGCCCGGCCGGCG
GTGGTCGAGCGGTACTGGCCTGAGCAAGAGCCGCAGCGAGACCGACTTCGAGAAGGTCGAGGCCGAGAGCGGCGA
TGAGGACGGCGGCGACGGAAGCCTCCGCAGACGCCAGGTCCCGAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAG
CGGCAGCGGAGGAGGCGGCGGCGGCTCTTGGATACCCTGGGGATGGGCGGGCGGCGCCAGCGCAGCAAAGAGCTC
CTCACGGGAGGAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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