Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6847
Gene name
Locationscaffold_62:22481..23445
Strand-
Gene length (bp)964
Transcript length (bp)894
Coding sequence length (bp)891
Protein length (aa) 297

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14880 COX14 Cytochrome oxidase c assembly 5.4E-11 82 133

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 67 0.45

Transmembrane Domains

Domain # Start End Length
1 94 116 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6847
MASKLGSKMMARLKPRSVKDATRFTSTVPHAMSKTAGQRSPHLPKSSSWLPGETPEQRVVRLRKAHLAARKAQDK
PFERFLDSMREFMDAAHKLTVRGLILFSILCAIVSVYSVWDMLRFNRARRREWIEIQKKFENDDLSAARVAYLKG
EGTEAQIALVEEANREAKRLGTKLPPLLPPPEQRTHFEEQVKPTLVPREPSMDGKGVFGIFSGLFGGSSTSTSTS
NSNSDEAATADSHLESNVAAGSIAQTVEASAKSVWDVEKERQRKGGSLDRLGLDAGASDRSPPSRTKRWWSW
Coding >Ophio5|6847
ATGGCCTCGAAGCTAGGGTCAAAGATGATGGCAAGGCTCAAACCACGGAGCGTTAAGGATGCCACGCGGTTTACC
TCGACCGTGCCTCATGCCATGTCCAAAACGGCCGGCCAGCGGTCGCCGCACCTACCCAAGTCTTCGTCCTGGCTA
CCTGGCGAGACGCCAGAGCAGCGAGTCGTACGTCTGCGAAAAGCACATCTGGCGGCTCGGAAGGCTCAGGACAAA
CCGTTTGAACGGTTCCTTGACTCCATGAGAGAGTTCATGGACGCGGCGCACAAACTGACCGTCAGAGGCCTCATC
CTCTTCTCCATCCTTTGTGCCATCGTCAGCGTCTACTCCGTGTGGGATATGCTACGTTTCAACCGTGCCCGCCGC
CGCGAATGGATCGAGATCCAGAAGAAGTTCGAAAACGATGACCTGTCTGCCGCACGTGTGGCCTATCTGAAAGGC
GAAGGCACGGAGGCTCAGATCGCGCTCGTTGAAGAGGCCAATCGCGAGGCCAAGAGGCTGGGTACCAAGCTGCCG
CCGCTACTACCTCCGCCCGAGCAGCGGACGCATTTCGAGGAGCAAGTCAAACCCACTCTCGTCCCACGCGAACCG
AGCATGGATGGCAAAGGTGTGTTTGGCATCTTCTCGGGTCTCTTTGGTGGAAGCAGCACCAGCACCAGCACCAGC
AACAGCAACAGCGACGAAGCAGCAACCGCAGATAGCCATCTAGAATCCAACGTTGCTGCCGGAAGCATTGCGCAG
ACGGTCGAAGCGTCAGCCAAAAGCGTATGGGACGTGGAAAAAGAGAGACAGCGCAAGGGCGGGAGCCTCGACCGG
CTGGGACTGGACGCTGGGGCTTCGGACAGGTCGCCGCCGTCGAGGACGAAGCGATGGTGGTCATGG
Transcript >Ophio5|6847
ATGGCCTCGAAGCTAGGGTCAAAGATGATGGCAAGGCTCAAACCACGGAGCGTTAAGGATGCCACGCGGTTTACC
TCGACCGTGCCTCATGCCATGTCCAAAACGGCCGGCCAGCGGTCGCCGCACCTACCCAAGTCTTCGTCCTGGCTA
CCTGGCGAGACGCCAGAGCAGCGAGTCGTACGTCTGCGAAAAGCACATCTGGCGGCTCGGAAGGCTCAGGACAAA
CCGTTTGAACGGTTCCTTGACTCCATGAGAGAGTTCATGGACGCGGCGCACAAACTGACCGTCAGAGGCCTCATC
CTCTTCTCCATCCTTTGTGCCATCGTCAGCGTCTACTCCGTGTGGGATATGCTACGTTTCAACCGTGCCCGCCGC
CGCGAATGGATCGAGATCCAGAAGAAGTTCGAAAACGATGACCTGTCTGCCGCACGTGTGGCCTATCTGAAAGGC
GAAGGCACGGAGGCTCAGATCGCGCTCGTTGAAGAGGCCAATCGCGAGGCCAAGAGGCTGGGTACCAAGCTGCCG
CCGCTACTACCTCCGCCCGAGCAGCGGACGCATTTCGAGGAGCAAGTCAAACCCACTCTCGTCCCACGCGAACCG
AGCATGGATGGCAAAGGTGTGTTTGGCATCTTCTCGGGTCTCTTTGGTGGAAGCAGCACCAGCACCAGCACCAGC
AACAGCAACAGCGACGAAGCAGCAACCGCAGATAGCCATCTAGAATCCAACGTTGCTGCCGGAAGCATTGCGCAG
ACGGTCGAAGCGTCAGCCAAAAGCGTATGGGACGTGGAAAAAGAGAGACAGCGCAAGGGCGGGAGCCTCGACCGG
CTGGGACTGGACGCTGGGGCTTCGGACAGGTCGCCGCCGTCGAGGACGAAGCGATGGTGGTCATGGTGA
Gene >Ophio5|6847
ATGGCCTCGAAGCTAGGGTCAAAGATGATGGCAAGGCTCAAACCACGGAGCGTTAAGGATGCCACGCGGTTTACC
TCGACCGTGCCTCATGCCATGTCCAAAACGGCCGGCCAGCGGTCGCCGCACCTACCCAAGTCTTCGTCCTGGCTA
CCTGGCGAGACGCCAGAGCAGCGAGTCGTACGTCTGCGAAAAGCACATCTGGCGGCTCGGAAGGCTCAGGACAAA
CCGTTTGAACGGTTCCTTGACTCCATGAGAGAGTTCATGGACGCGGCGCACAAACTGACCGTCAGAGGCCTCATC
CTCTTCTCCAGTACTGTCCTTTGACTCTCCTGTCCCCGAGCGAGGATGATGCCTAGGAGCTGACGCCCGGTATTA
CGCAGTCCTTTGTGCCATCGTCAGCGTCTACTCCGTGTGGGATATGCTACGTTTCAACCGTGCCCGCCGCCGCGA
ATGGATCGAGATCCAGAAGAAGTTCGAAAACGATGACCTGTCTGCCGCACGTGTGGCCTATCTGAAAGGCGAAGG
CACGGAGGCTCAGATCGCGCTCGTTGAAGAGGCCAATCGCGAGGCCAAGAGGCTGGGTACCAAGCTGCCGCCGCT
ACTACCTCCGCCCGAGCAGCGGACGCATTTCGAGGAGCAAGTCAAACCCACTCTCGTCCCACGCGAACCGAGCAT
GGATGGCAAAGGTGTGTTTGGCATCTTCTCGGGTCTCTTTGGTGGAAGCAGCACCAGCACCAGCACCAGCAACAG
CAACAGCGACGAAGCAGCAACCGCAGATAGCCATCTAGAATCCAACGTTGCTGCCGGAAGCATTGCGCAGACGGT
CGAAGCGTCAGCCAAAAGCGTATGGGACGTGGAAAAAGAGAGACAGCGCAAGGGCGGGAGCCTCGACCGGCTGGG
ACTGGACGCTGGGGCTTCGGACAGGTCGCCGCCGTCGAGGACGAAGCGATGGTGGTCATGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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