Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6844
Gene name
Locationscaffold_62:16964..17506
Strand+
Gene length (bp)542
Transcript length (bp)480
Coding sequence length (bp)477
Protein length (aa) 159

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 4 26 22
2 114 133 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6844
MARLQIIFLAFAAIIAAVSAASGPTFCKCTCFKNSTIIPLGPASQFKDPASKSPSLLLRSLGDDRPAPDRRSAST
SCSECTKAFCLSQGIDFCKEAKDENVITMCFQRVSNKDRFIVWGFILVTLGLLAWAAFKRLVEWRDGRTLHRQAV
DYSRVMGQG
Coding >Ophio5|6844
ATGGCCCGACTGCAAATTATTTTCCTCGCCTTCGCGGCGATCATTGCGGCCGTGTCAGCAGCCTCCGGGCCGACG
TTTTGCAAATGCACCTGCTTCAAGAACAGCACCATCATACCCCTGGGACCCGCAAGTCAATTCAAGGACCCTGCT
TCCAAGTCGCCTTCTCTACTGTTGCGATCACTCGGCGACGACCGGCCTGCGCCCGACCGCCGCTCGGCCTCGACG
TCCTGCTCCGAGTGCACAAAGGCCTTCTGTCTCAGCCAGGGCATCGACTTTTGCAAGGAGGCAAAGGATGAAAAC
GTCATCACCATGTGCTTCCAGCGCGTCAGTAACAAAGACAGGTTCATCGTCTGGGGCTTCATCCTCGTCACTTTG
GGACTCCTGGCCTGGGCCGCCTTCAAGCGCCTTGTTGAATGGCGTGATGGGCGGACTTTGCATCGTCAGGCAGTC
GACTATTCGCGTGTGATGGGCCAAGGG
Transcript >Ophio5|6844
ATGGCCCGACTGCAAATTATTTTCCTCGCCTTCGCGGCGATCATTGCGGCCGTGTCAGCAGCCTCCGGGCCGACG
TTTTGCAAATGCACCTGCTTCAAGAACAGCACCATCATACCCCTGGGACCCGCAAGTCAATTCAAGGACCCTGCT
TCCAAGTCGCCTTCTCTACTGTTGCGATCACTCGGCGACGACCGGCCTGCGCCCGACCGCCGCTCGGCCTCGACG
TCCTGCTCCGAGTGCACAAAGGCCTTCTGTCTCAGCCAGGGCATCGACTTTTGCAAGGAGGCAAAGGATGAAAAC
GTCATCACCATGTGCTTCCAGCGCGTCAGTAACAAAGACAGGTTCATCGTCTGGGGCTTCATCCTCGTCACTTTG
GGACTCCTGGCCTGGGCCGCCTTCAAGCGCCTTGTTGAATGGCGTGATGGGCGGACTTTGCATCGTCAGGCAGTC
GACTATTCGCGTGTGATGGGCCAAGGGTAG
Gene >Ophio5|6844
ATGGCCCGACTGCAAATTATTTTCCTCGCCTTCGCGGCGATCATTGCGGCCGTGTCAGCAGCCTGTGAGTTTCTC
CCCCTCCGCCACTCCGTCTCCGAATGCACTGACTCTCGGGCCGCCGTACAGCCGGGCCGACGTTTTGCAAATGCA
CCTGCTTCAAGAACAGCACCATCATACCCCTGGGACCCGCAAGTCAATTCAAGGACCCTGCTTCCAAGTCGCCTT
CTCTACTGTTGCGATCACTCGGCGACGACCGGCCTGCGCCCGACCGCCGCTCGGCCTCGACGTCCTGCTCCGAGT
GCACAAAGGCCTTCTGTCTCAGCCAGGGCATCGACTTTTGCAAGGAGGCAAAGGATGAAAACGTCATCACCATGT
GCTTCCAGCGCGTCAGTAACAAAGACAGGTTCATCGTCTGGGGCTTCATCCTCGTCACTTTGGGACTCCTGGCCT
GGGCCGCCTTCAAGCGCCTTGTTGAATGGCGTGATGGGCGGACTTTGCATCGTCAGGCAGTCGACTATTCGCGTG
TGATGGGCCAAGGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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