Protein ID | Ophio5|6843 |
Gene name | |
Location | scaffold_62:15443..16695 |
Strand | - |
Gene length (bp) | 1252 |
Transcript length (bp) | 1149 |
Coding sequence length (bp) | 1146 |
Protein length (aa) | 382 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10501 | Ribosomal_L50 | Ribosomal subunit 39S | 2.3E-13 | 241 | 334 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005739 | mitochondrion | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0043227 | membrane-bounded organelle | No |
GO:0005575 | cellular_component | No |
GO:0043229 | intracellular organelle | No |
GO:0043231 | intracellular membrane-bounded organelle | No |
GO:0043226 | organelle | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 26 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|6843 MPRLPGTRSLKLLSLAASSPQSATATPLTATCALTTTSSARSEATEWVRKKLWKGKPPGPKDPYAPRPALLADSV ESAPTTTIELPPRRDRTPRPIKLSRLTVPPKRTEAATEAQAVEADPNYVPAEDGKGLEHIETLDTWWQRPGHWGE ESQFKGFGGSTLVTDSGLIEASLRRAFVEVIALQQTGHFAEWMAKPWRMGGLKELRLILDTRLDTTGELRQVTNA SAISQHVRNQAEPAEKQAAQTSEKEAKAAIQRWGNSWKKSQLSDEIKFAMRKRLYQLTGNLISDAKLGAASTIQH LLTVVAKAPKPKRLATELRERGDLLKLANVKVHSRRVGLITKETAVGRWKVIRKELSKRGIPARGPIEVSSLIEK QWLSGKV |
Coding | >Ophio5|6843 ATGCCTCGGCTTCCCGGGACGAGGAGCTTGAAACTCTTGAGCTTGGCAGCCTCGTCCCCTCAGTCGGCGACGGCG ACGCCCTTGACGGCGACTTGCGCTCTGACGACGACGAGCTCGGCGCGAAGCGAAGCGACGGAGTGGGTACGAAAG AAGCTCTGGAAAGGAAAGCCTCCCGGCCCCAAGGATCCGTATGCTCCTCGGCCAGCGTTGCTGGCCGATTCCGTC GAGTCGGCCCCAACGACTACGATAGAGCTGCCACCACGGCGGGATCGAACGCCGCGGCCGATCAAGCTATCGCGC CTCACTGTGCCGCCAAAGCGGACCGAAGCGGCCACCGAGGCGCAGGCCGTGGAGGCGGACCCCAACTACGTACCG GCCGAGGACGGCAAGGGCCTGGAGCACATCGAGACGCTTGATACCTGGTGGCAACGGCCGGGCCACTGGGGCGAG GAGAGCCAGTTCAAGGGCTTCGGTGGCAGTACCCTCGTCACTGACAGCGGCCTTATCGAGGCTTCACTGCGCAGG GCCTTTGTCGAGGTCATTGCCCTGCAGCAGACGGGCCACTTTGCCGAGTGGATGGCCAAGCCTTGGAGGATGGGC GGCTTGAAGGAACTCCGTCTGATACTCGATACCAGGCTTGATACCACAGGCGAATTACGGCAAGTCACTAATGCT AGCGCCATCTCACAGCACGTCCGGAACCAGGCCGAGCCGGCCGAGAAACAAGCAGCCCAGACTTCGGAGAAGGAG GCCAAGGCCGCCATCCAGCGATGGGGAAACTCATGGAAGAAATCTCAGCTTAGCGACGAAATCAAGTTTGCGATG CGGAAGCGTCTCTACCAACTCACGGGCAACCTCATATCCGACGCCAAGCTAGGAGCCGCCAGCACGATCCAGCAT CTGCTTACAGTCGTCGCCAAAGCGCCGAAACCGAAACGGCTGGCGACGGAGCTTCGCGAACGCGGAGATCTGCTG AAGCTAGCCAATGTGAAGGTGCACAGCCGCAGGGTCGGGCTCATCACCAAGGAGACTGCCGTCGGCCGCTGGAAG GTGATTCGCAAGGAGCTCAGCAAGCGCGGTATTCCTGCAAGAGGGCCGATTGAAGTTTCGAGCCTCATCGAGAAG CAGTGGCTTTCGGGTAAGGTG |
Transcript | >Ophio5|6843 ATGCCTCGGCTTCCCGGGACGAGGAGCTTGAAACTCTTGAGCTTGGCAGCCTCGTCCCCTCAGTCGGCGACGGCG ACGCCCTTGACGGCGACTTGCGCTCTGACGACGACGAGCTCGGCGCGAAGCGAAGCGACGGAGTGGGTACGAAAG AAGCTCTGGAAAGGAAAGCCTCCCGGCCCCAAGGATCCGTATGCTCCTCGGCCAGCGTTGCTGGCCGATTCCGTC GAGTCGGCCCCAACGACTACGATAGAGCTGCCACCACGGCGGGATCGAACGCCGCGGCCGATCAAGCTATCGCGC CTCACTGTGCCGCCAAAGCGGACCGAAGCGGCCACCGAGGCGCAGGCCGTGGAGGCGGACCCCAACTACGTACCG GCCGAGGACGGCAAGGGCCTGGAGCACATCGAGACGCTTGATACCTGGTGGCAACGGCCGGGCCACTGGGGCGAG GAGAGCCAGTTCAAGGGCTTCGGTGGCAGTACCCTCGTCACTGACAGCGGCCTTATCGAGGCTTCACTGCGCAGG GCCTTTGTCGAGGTCATTGCCCTGCAGCAGACGGGCCACTTTGCCGAGTGGATGGCCAAGCCTTGGAGGATGGGC GGCTTGAAGGAACTCCGTCTGATACTCGATACCAGGCTTGATACCACAGGCGAATTACGGCAAGTCACTAATGCT AGCGCCATCTCACAGCACGTCCGGAACCAGGCCGAGCCGGCCGAGAAACAAGCAGCCCAGACTTCGGAGAAGGAG GCCAAGGCCGCCATCCAGCGATGGGGAAACTCATGGAAGAAATCTCAGCTTAGCGACGAAATCAAGTTTGCGATG CGGAAGCGTCTCTACCAACTCACGGGCAACCTCATATCCGACGCCAAGCTAGGAGCCGCCAGCACGATCCAGCAT CTGCTTACAGTCGTCGCCAAAGCGCCGAAACCGAAACGGCTGGCGACGGAGCTTCGCGAACGCGGAGATCTGCTG AAGCTAGCCAATGTGAAGGTGCACAGCCGCAGGGTCGGGCTCATCACCAAGGAGACTGCCGTCGGCCGCTGGAAG GTGATTCGCAAGGAGCTCAGCAAGCGCGGTATTCCTGCAAGAGGGCCGATTGAAGTTTCGAGCCTCATCGAGAAG CAGTGGCTTTCGGGTAAGGTGTAG |
Gene | >Ophio5|6843 ATGCCTCGGCTTCCCGGGACGAGGAGCTTGAAACTCTTGAGCTTGGCAGCCTCGTCCCCTCAGTCGGCGACGGCG ACGCCCTTGACGGCGACTTGCGCTCTGACGACGACGAGCTCGGCGCGAAGCGAAGCGACGGAGTGGGTACGAAAG AAGCTCTGGAAAGGAAAGCCTCCCGGCCCCAAGGATCCGTATGCTCCTCGGCCAGCGTTGCTGGCCGATTCCGTC GAGTCGGCCCCAACGACTACGATAGAGCTGCCACCACGGCGGGATCGAACGCCGCGGCCGATCAAGCTATCGCGC CTCACTGTGCCGCCAAAGCGGACCGAAGCGGCCACCGAGGCGCAGGCCGTGGAGGCGGACCCCAACTACGTACCG GCCGAGGACGGCAAGGGCCTGGAGCACATCGAGACGCTTGATACCTGGTGGCAACGGCCGGGCCACTGGGGCGAG GAGAGCCAGTTCAAGGGCTTCGGTGGCAGTACCCTCGTCACTGACAGCGGCCTTATCGAGGCTTCACTGCGCAGG GCCTTTGTCGAGGTCATTGCCCTGCAGCAGACGGGCCACTTTGCCGAGTGGATGGCCAAGCCTTGGAGGATGGGC GGCTTGAAGGAACTCCGTCTGATACTCGATACCAGGCTTGATACCACAGGCGAATTACGGCAAGTCACTAATGCT AGCGCCATCTCACAGCACGTCCGGAACCAGGCCGAGCCGGCCGAGAAACAAGCAGCCCAGACTTCGGAGAAGGAG GCCAAGGCCGCCATCCAGCGATGGGGAAACTCATGGAAGAAATCTCAGCTTAGCGACGAAATCAAGTTTGCGGTA CGTGCCCCTCCCCCCCCCCCCCTCCCTCTTGTTCGCCTCTGAACTCTGTTGGGGGTTGGTCCACGAAGCTGACAT ACACCAACACACAAAAAAAAAAAAGATGCGGAAGCGTCTCTACCAACTCACGGGCAACCTCATATCCGACGCCAA GCTAGGAGCCGCCAGCACGATCCAGCATCTGCTTACAGTCGTCGCCAAAGCGCCGAAACCGAAACGGCTGGCGAC GGAGCTTCGCGAACGCGGAGATCTGCTGAAGCTAGCCAATGTGAAGGTGCACAGCCGCAGGGTCGGGCTCATCAC CAAGGAGACTGCCGTCGGCCGCTGGAAGGTGATTCGCAAGGAGCTCAGCAAGCGCGGTATTCCTGCAAGAGGGCC GATTGAAGTTTCGAGCCTCATCGAGAAGCAGTGGCTTTCGGGTAAGGTGTAG |