Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|684
Gene name
Locationscaffold_1188:741..2697
Strand+
Gene length (bp)1956
Transcript length (bp)1842
Coding sequence length (bp)1839
Protein length (aa) 613

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07647 SAM_2 SAM domain (Sterile alpha motif) 4.5E-09 547 604

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q7RZQ3|VTS1_NEUCR Protein VTS1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=vts1 PE=3 SV=3 7 612 0.0E+00
sp|Q4WJS2|VTS1_ASPFU Protein vts1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=vts1 PE=3 SV=2 5 612 0.0E+00
sp|Q5BGC4|VTS1_EMENI Protein vts1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=vts1 PE=3 SV=1 5 612 0.0E+00
sp|Q4IBN1|VTS1_GIBZE Protein VTS1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=VTS1 PE=3 SV=1 1 612 0.0E+00
sp|Q4P965|VTS1_USTMA Protein VTS1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=VTS1 PE=3 SV=1 9 399 1.0E-39
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Swissprot ID Swissprot Description Start End E-value
sp|Q7RZQ3|VTS1_NEUCR Protein VTS1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=vts1 PE=3 SV=3 7 612 0.0E+00
sp|Q4WJS2|VTS1_ASPFU Protein vts1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=vts1 PE=3 SV=2 5 612 0.0E+00
sp|Q5BGC4|VTS1_EMENI Protein vts1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=vts1 PE=3 SV=1 5 612 0.0E+00
sp|Q4IBN1|VTS1_GIBZE Protein VTS1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=VTS1 PE=3 SV=1 1 612 0.0E+00
sp|Q4P965|VTS1_USTMA Protein VTS1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=VTS1 PE=3 SV=1 9 399 1.0E-39
sp|Q6CHK0|VTS1_YARLI Protein VTS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=VTS1 PE=3 SV=1 83 179 1.0E-25
sp|Q6CHK0|VTS1_YARLI Protein VTS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=VTS1 PE=3 SV=1 542 613 4.0E-24
sp|Q6BSL1|VTS1_DEBHA Protein VTS1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=VTS1 PE=3 SV=2 347 606 1.0E-22
sp|Q758Y4|VTS1_ASHGO Protein VTS1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=VTS1 PE=3 SV=2 538 612 4.0E-21
sp|Q6CY29|VTS1_KLULA Protein VTS1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=VTS1 PE=3 SV=1 542 612 6.0E-19
sp|Q08831|VTS1_YEAST Protein VTS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTS1 PE=1 SV=1 533 612 2.0E-18
sp|Q6FM94|VTS1_CANGA Protein VTS1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=VTS1 PE=3 SV=1 538 612 2.0E-18
sp|Q9P6R7|VTS1_SCHPO Protein vts1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC13E7.03c PE=1 SV=1 546 603 8.0E-18
sp|Q4P965|VTS1_USTMA Protein VTS1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=VTS1 PE=3 SV=1 539 605 1.0E-17
sp|Q5AI80|VTS1_CANAL Protein VTS1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=VTS1 PE=3 SV=1 546 604 1.0E-17
sp|Q5PRF9|SMAG2_HUMAN Protein Smaug homolog 2 OS=Homo sapiens GN=SAMD4B PE=1 SV=1 543 605 4.0E-06
sp|Q80XS6|SMAG2_MOUSE Protein Smaug homolog 2 OS=Mus musculus GN=Samd4b PE=2 SV=1 543 605 4.0E-06
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 51 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|684
MSGNHAIGNRNSTPEANSASTLRPPSSRTVGAGSSLRASADMASLAGASSSRIRPSSDFYGQPYQALGQVATEND
AQDKIALQWIADIDQYETTLEEMAAATLDQDFKDELSAIEQWFRVLSEAERTAALYALLQQTTQVQIRFFIQVLQ
QMGKNHPMSGVLSPANFDKDPMTNRLNDAMNKLNADAALNPYARASAIPPGSKRNSGLDPSTITAMFPDAAAAIA
TEKAKFTQQTGTSPSNHNSTIIDSRGSTAGPGVSSSQEVREGGIGNSTSPWGPSGDQAHSKTSGPQAPMGQFVQP
PPSAGLRSPRPQLSSSAIHSTTVTAPEKNSTDLPLLSPFNAGSGNWASMVNTPMASTFNTGSPSGSQADMVANAT
AMKLAALSTVNNRFALDDVRKYRRARSNDAPTIAGQNQMSPSAQCVNLPGANVVMINEHGQVLSRDQIIAMQAQQ
GLGLSGQRSRPSSPGVAMQPAMGPTVTQYTSPQHNGFLSAYDGPSTLLNTAVNLSQLGIGSHEGYLSDHSDLVRG
RSPRGRRGSSKPPEDPTDPSLLQDIPSWLRSLRLHKYTDNLKDMKWTELIELDDRALEDRGVNALGARRKMLKVF
EQVKEARTEGRIA
Coding >Ophio5|684
ATGTCGGGAAACCACGCCATCGGCAACCGAAACAGTACCCCCGAGGCCAATAGCGCGTCTACCTTGCGCCCTCCC
TCCTCGCGAACTGTTGGTGCCGGCAGTTCCCTCCGCGCTTCTGCCGACATGGCCTCGCTCGCAGGCGCCTCATCA
AGCCGCATTCGACCATCATCCGACTTTTATGGGCAACCTTATCAAGCCCTCGGCCAAGTGGCCACAGAAAATGAT
GCGCAGGACAAGATTGCTTTGCAATGGATTGCCGACATCGACCAGTACGAGACGACTCTGGAAGAGATGGCCGCG
GCCACCCTAGACCAAGATTTCAAAGATGAGCTGAGCGCTATTGAGCAATGGTTTCGGGTTCTGAGCGAAGCTGAA
CGCACAGCTGCCCTTTACGCCCTCTTGCAACAAACTACGCAGGTGCAGATCCGGTTTTTCATACAAGTTCTTCAG
CAAATGGGCAAAAATCACCCCATGTCGGGAGTTCTGTCTCCTGCCAACTTTGACAAAGATCCCATGACCAATCGT
TTAAACGACGCCATGAATAAGCTCAACGCGGACGCAGCGTTGAACCCCTACGCGCGCGCTTCAGCCATACCACCA
GGATCGAAGCGAAACTCCGGGCTCGATCCCTCGACTATAACTGCTATGTTTCCGGATGCGGCTGCCGCCATAGCC
ACGGAAAAGGCCAAGTTCACTCAGCAGACGGGTACTTCTCCGTCAAACCACAATAGCACTATCATTGATTCCAGA
GGCTCAACAGCTGGCCCTGGAGTATCCAGCTCCCAAGAAGTCCGAGAAGGTGGCATTGGCAACTCAACATCGCCA
TGGGGCCCCAGCGGTGATCAAGCCCACTCCAAGACTTCCGGCCCGCAGGCCCCTATGGGTCAATTTGTTCAGCCC
CCCCCCTCGGCCGGGCTTAGGTCACCTAGGCCGCAATTGAGCAGTTCTGCTATTCACAGCACGACCGTGACGGCT
CCAGAAAAAAACTCGACCGATCTGCCGCTACTTTCTCCGTTCAACGCTGGCAGTGGCAACTGGGCTTCTATGGTA
AATACCCCGATGGCTTCAACTTTCAACACCGGGAGTCCCAGTGGCTCTCAGGCCGACATGGTCGCGAATGCTACG
GCAATGAAACTGGCAGCGTTGTCGACAGTCAATAACCGCTTCGCGTTGGATGACGTGCGCAAGTATCGTCGCGCC
CGCTCCAATGACGCGCCGACCATTGCGGGTCAAAATCAGATGTCCCCCTCCGCACAGTGTGTCAACCTCCCGGGG
GCAAACGTGGTCATGATCAACGAACACGGCCAGGTTTTGAGTCGGGACCAAATTATAGCGATGCAGGCTCAGCAG
GGACTTGGTTTAAGTGGACAAAGATCGCGTCCTAGCTCGCCGGGCGTTGCCATGCAGCCGGCCATGGGCCCGACA
GTAACCCAGTACACGTCGCCACAACACAATGGTTTCCTAAGCGCGTATGACGGTCCATCGACATTGCTGAACACA
GCCGTCAACCTCAGTCAGCTCGGGATAGGAAGTCACGAGGGCTATCTGTCGGATCACTCTGACTTAGTGCGGGGA
CGCTCGCCAAGGGGCAGACGAGGGAGCTCCAAACCGCCCGAGGACCCAACAGATCCGAGTCTCCTTCAGGACATT
CCCAGTTGGCTTCGAAGCTTGCGCCTACATAAGTATACTGACAATTTGAAAGACATGAAGTGGACAGAACTCATC
GAGCTAGATGACAGGGCTCTTGAGGATCGAGGAGTTAATGCTCTCGGCGCTCGTAGGAAAATGCTGAAAGTCTTT
GAACAAGTCAAAGAAGCAAGGACAGAAGGCAGGATAGCA
Transcript >Ophio5|684
ATGTCGGGAAACCACGCCATCGGCAACCGAAACAGTACCCCCGAGGCCAATAGCGCGTCTACCTTGCGCCCTCCC
TCCTCGCGAACTGTTGGTGCCGGCAGTTCCCTCCGCGCTTCTGCCGACATGGCCTCGCTCGCAGGCGCCTCATCA
AGCCGCATTCGACCATCATCCGACTTTTATGGGCAACCTTATCAAGCCCTCGGCCAAGTGGCCACAGAAAATGAT
GCGCAGGACAAGATTGCTTTGCAATGGATTGCCGACATCGACCAGTACGAGACGACTCTGGAAGAGATGGCCGCG
GCCACCCTAGACCAAGATTTCAAAGATGAGCTGAGCGCTATTGAGCAATGGTTTCGGGTTCTGAGCGAAGCTGAA
CGCACAGCTGCCCTTTACGCCCTCTTGCAACAAACTACGCAGGTGCAGATCCGGTTTTTCATACAAGTTCTTCAG
CAAATGGGCAAAAATCACCCCATGTCGGGAGTTCTGTCTCCTGCCAACTTTGACAAAGATCCCATGACCAATCGT
TTAAACGACGCCATGAATAAGCTCAACGCGGACGCAGCGTTGAACCCCTACGCGCGCGCTTCAGCCATACCACCA
GGATCGAAGCGAAACTCCGGGCTCGATCCCTCGACTATAACTGCTATGTTTCCGGATGCGGCTGCCGCCATAGCC
ACGGAAAAGGCCAAGTTCACTCAGCAGACGGGTACTTCTCCGTCAAACCACAATAGCACTATCATTGATTCCAGA
GGCTCAACAGCTGGCCCTGGAGTATCCAGCTCCCAAGAAGTCCGAGAAGGTGGCATTGGCAACTCAACATCGCCA
TGGGGCCCCAGCGGTGATCAAGCCCACTCCAAGACTTCCGGCCCGCAGGCCCCTATGGGTCAATTTGTTCAGCCC
CCCCCCTCGGCCGGGCTTAGGTCACCTAGGCCGCAATTGAGCAGTTCTGCTATTCACAGCACGACCGTGACGGCT
CCAGAAAAAAACTCGACCGATCTGCCGCTACTTTCTCCGTTCAACGCTGGCAGTGGCAACTGGGCTTCTATGGTA
AATACCCCGATGGCTTCAACTTTCAACACCGGGAGTCCCAGTGGCTCTCAGGCCGACATGGTCGCGAATGCTACG
GCAATGAAACTGGCAGCGTTGTCGACAGTCAATAACCGCTTCGCGTTGGATGACGTGCGCAAGTATCGTCGCGCC
CGCTCCAATGACGCGCCGACCATTGCGGGTCAAAATCAGATGTCCCCCTCCGCACAGTGTGTCAACCTCCCGGGG
GCAAACGTGGTCATGATCAACGAACACGGCCAGGTTTTGAGTCGGGACCAAATTATAGCGATGCAGGCTCAGCAG
GGACTTGGTTTAAGTGGACAAAGATCGCGTCCTAGCTCGCCGGGCGTTGCCATGCAGCCGGCCATGGGCCCGACA
GTAACCCAGTACACGTCGCCACAACACAATGGTTTCCTAAGCGCGTATGACGGTCCATCGACATTGCTGAACACA
GCCGTCAACCTCAGTCAGCTCGGGATAGGAAGTCACGAGGGCTATCTGTCGGATCACTCTGACTTAGTGCGGGGA
CGCTCGCCAAGGGGCAGACGAGGGAGCTCCAAACCGCCCGAGGACCCAACAGATCCGAGTCTCCTTCAGGACATT
CCCAGTTGGCTTCGAAGCTTGCGCCTACATAAGTATACTGACAATTTGAAAGACATGAAGTGGACAGAACTCATC
GAGCTAGATGACAGGGCTCTTGAGGATCGAGGAGTTAATGCTCTCGGCGCTCGTAGGAAAATGCTGAAAGTCTTT
GAACAAGTCAAAGAAGCAAGGACAGAAGGCAGGATAGCATAG
Gene >Ophio5|684
ATGTCGGGAAACCACGCCATCGGCAACCGAAACAGTACCCCCGAGGCCAATAGCGCGTCTACCTTGCGCCCTCCC
TCCTCGCGAACTGTTGGTGCCGGCAGTTCCCTCCGCGCTTCTGCCGACATGGCCTCGCTCGCAGGCGCCTCATCA
AGCCGCATTCGACCATCATCCGACTTTTATGGGCAACCTTATCAAGCCCTCGGCCAAGTGGCCACAGAAAATGAT
GCGCAGGACAAGATTGCTTTGCAATGGATTGCCGACATCGACCAGTACGAGACGACTCTGGAAGAGATGGCCGCG
GCCACCCTAGACCAAGATTTCAAAGATGAGCTGAGCGCTATTGAGCAATGGTTTCGGGTTCTGAGCGAAGCTGAA
CGCACAGCTGCCCTTTACGCCCTCTTGCAACAAACTACGCAGGTGCAGATCCGGTTTTTCATACAAGTTCTTCAG
CAAATGGGCAAAAATCACCCCATGTCGGGAGTTCTGTCTCCTGCCAACTTTGACAAAGGTCGGTCATGGGCTGGT
AGTGTATTGACTTTTTACGGGTGGATTGACAAAGCCTGCAGATCCCATGACCAATCGTTTAAACGACGCCATGAA
TAAGCTCAACGCGGACGCAGCGTTGAACCCCTACGCGCGCGCTTCAGCCATACCACCAGGATCGAAGCGAAACTC
CGGGCTCGATCCCTCGACTATAACTGCTATGTTTCCGGATGCGGCTGCCGCCATAGCCACGGAAAAGGCCAAGTT
CACTCAGCAGACGGGTACTTCTCCGTCAAACCACAATAGCACTATCATTGATTCCAGAGGCTCAACAGCTGGCCC
TGGAGTATCCAGCTCCCAAGAAGTCCGAGAAGGTGGCATTGGCAACTCAACATCGCCATGGGGCCCCAGCGGTGA
TCAAGCCCACTCCAAGACTTCCGGCCCGCAGGCCCCTATGGGTCAATTTGTTCAGCCCCCCCCCTCGGCCGGGCT
TAGGTCACCTAGGCCGCAATTGAGCAGTTCTGCTATTCACAGCACGACCGTGACGGCTCCAGAAAAAAACTCGAC
CGATCTGCCGCTACTTTCTCCGTTCAACGCTGGCAGTGGCAACTGGGCTTCTATGGTAAATACCCCGATGGCTTC
AACTTTCAACACCGGGAGTCCCAGTGGCTCTCAGGCCGACATGGTCGCGAATGCTACGGCAATGAAACTGGCAGC
GTTGTCGACAGTCAATAACCGCTTCGCGTTGGATGACGTGCGCAAGTATCGTCGCGCCCGCTCCAATGACGCGCC
GACCATTGCGGGTCAAAATCAGATGTCCCCCTCCGCACAGTGTGTCAACCTCCCGGGGGCAAACGTGGTCATGAT
CAACGAACACGGCCAGGTTTTGAGTCGGGACCAAATTATAGCGATGCAGGCTCAGCAGGGACTTGGTTTAAGTGG
ACAAAGATCGCGTCCTAGCTCGCCGGGCGTTGCCATGCAGCCGGCCATGGGCCCGACAGTAACCCAGTACACGTC
GCCACAACACAATGGTTTCCTAAGCGCGTATGACGGTCCATCGACATTGCTGAACACAGCCGTCAACCTCAGTCA
GCTCGGGATAGGAAGTCACGAGGGCTATCTGTCGGATCACTCTGACTTAGTGCGGGGACGCTCGCCAAGGGGCAG
ACGAGGGAGCTCCAAACCGCCCGAGGACCCAACAGATCCGAGTCTCCTTCAGGACATTCCCAGTTGGCTTCGAAG
CTTGCGCCTACATAAGTATACTGACAATTTGAAAGACATGAAGTGGACAGAACTCATCGAGCTAGATGACAGGGC
TCTTGAGGATCGAGGAGTTAATGCTCTCGGCGCTCGTAGGAAAATGCTGAAAGTCTTTGAACAAGTCAAAGGTAC
GATTTCCGGTAGGCCCTTAATCGCAACGCAGATTACTAAACGCGCGGTCTAGAAGCAAGGACAGAAGGCAGGATA
GCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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