Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6821
Gene name
Locationscaffold_615:7077..7956
Strand-
Gene length (bp)879
Transcript length (bp)879
Coding sequence length (bp)876
Protein length (aa) 292

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12697 Abhydrolase_6 Alpha/beta hydrolase family 5.5E-16 40 274
PF06259 Abhydrolase_8 Alpha/beta hydrolase 1.6E-04 90 129

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 35 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6821
MQTEFSLPLHAQGDSDKFSVSQMASIERATVAISDREEAVLIISGYWHVPEHYSRVISQLQDKGIRVICECLPTI
RNLSPPHKTMHDDIQFIKDIVAREVEAKTLLTVVCHSYGGMVASAALGDFALTVGHSADKGGVTAIVYLSAFVPH
ENESLAGMFGGKLPAFMELRQDQTCGAFDPAAAFFGDLSAEDSEWATRLYVAGCPVSPMLSPIPGNDVAWRSIPS
AYIVCENDVALPPKVQRDMIARAREQGIRFDEYSVQADHSPFINKPGEITEIIVNVMQSVSLRTACM
Coding >Ophio5|6821
ATGCAGACAGAGTTCTCTCTTCCACTCCATGCTCAAGGCGACTCCGACAAGTTTTCTGTTTCCCAGATGGCCAGC
ATCGAACGCGCCACCGTGGCCATCTCAGACAGGGAAGAGGCAGTCCTGATCATCAGCGGCTATTGGCATGTTCCA
GAGCACTATTCTAGGGTCATATCGCAGCTCCAAGACAAGGGCATCAGAGTCATATGCGAATGCCTCCCCACCATC
AGGAATCTCTCGCCTCCCCACAAGACCATGCACGACGACATTCAATTCATCAAGGATATCGTGGCAAGAGAAGTC
GAGGCCAAGACGCTCCTGACCGTCGTGTGTCACTCGTACGGAGGAATGGTTGCTTCTGCTGCTCTAGGCGACTTT
GCCTTGACTGTCGGACACTCGGCGGATAAAGGGGGCGTGACTGCCATCGTCTACCTGTCTGCTTTTGTCCCCCAT
GAAAACGAGTCTCTTGCCGGCATGTTTGGAGGCAAGCTGCCCGCCTTCATGGAATTGCGGCAGGACCAGACCTGC
GGGGCATTCGATCCGGCCGCGGCCTTCTTCGGCGACTTATCCGCCGAGGACAGCGAATGGGCTACGAGGCTTTAT
GTTGCCGGGTGTCCTGTTAGCCCAATGCTGAGTCCCATCCCTGGAAACGATGTGGCTTGGCGATCGATCCCTTCG
GCTTATATCGTCTGCGAAAACGACGTCGCGCTTCCGCCCAAAGTCCAACGCGACATGATTGCCAGGGCCAGAGAG
CAGGGAATCAGGTTTGACGAGTACAGCGTGCAGGCTGACCACAGTCCGTTTATCAATAAGCCAGGGGAGATTACG
GAGATTATTGTCAATGTAATGCAGTCAGTCTCATTGAGGACTGCATGTATG
Transcript >Ophio5|6821
ATGCAGACAGAGTTCTCTCTTCCACTCCATGCTCAAGGCGACTCCGACAAGTTTTCTGTTTCCCAGATGGCCAGC
ATCGAACGCGCCACCGTGGCCATCTCAGACAGGGAAGAGGCAGTCCTGATCATCAGCGGCTATTGGCATGTTCCA
GAGCACTATTCTAGGGTCATATCGCAGCTCCAAGACAAGGGCATCAGAGTCATATGCGAATGCCTCCCCACCATC
AGGAATCTCTCGCCTCCCCACAAGACCATGCACGACGACATTCAATTCATCAAGGATATCGTGGCAAGAGAAGTC
GAGGCCAAGACGCTCCTGACCGTCGTGTGTCACTCGTACGGAGGAATGGTTGCTTCTGCTGCTCTAGGCGACTTT
GCCTTGACTGTCGGACACTCGGCGGATAAAGGGGGCGTGACTGCCATCGTCTACCTGTCTGCTTTTGTCCCCCAT
GAAAACGAGTCTCTTGCCGGCATGTTTGGAGGCAAGCTGCCCGCCTTCATGGAATTGCGGCAGGACCAGACCTGC
GGGGCATTCGATCCGGCCGCGGCCTTCTTCGGCGACTTATCCGCCGAGGACAGCGAATGGGCTACGAGGCTTTAT
GTTGCCGGGTGTCCTGTTAGCCCAATGCTGAGTCCCATCCCTGGAAACGATGTGGCTTGGCGATCGATCCCTTCG
GCTTATATCGTCTGCGAAAACGACGTCGCGCTTCCGCCCAAAGTCCAACGCGACATGATTGCCAGGGCCAGAGAG
CAGGGAATCAGGTTTGACGAGTACAGCGTGCAGGCTGACCACAGTCCGTTTATCAATAAGCCAGGGGAGATTACG
GAGATTATTGTCAATGTAATGCAGTCAGTCTCATTGAGGACTGCATGTATGTAA
Gene >Ophio5|6821
ATGCAGACAGAGTTCTCTCTTCCACTCCATGCTCAAGGCGACTCCGACAAGTTTTCTGTTTCCCAGATGGCCAGC
ATCGAACGCGCCACCGTGGCCATCTCAGACAGGGAAGAGGCAGTCCTGATCATCAGCGGCTATTGGCATGTTCCA
GAGCACTATTCTAGGGTCATATCGCAGCTCCAAGACAAGGGCATCAGAGTCATATGCGAATGCCTCCCCACCATC
AGGAATCTCTCGCCTCCCCACAAGACCATGCACGACGACATTCAATTCATCAAGGATATCGTGGCAAGAGAAGTC
GAGGCCAAGACGCTCCTGACCGTCGTGTGTCACTCGTACGGAGGAATGGTTGCTTCTGCTGCTCTAGGCGACTTT
GCCTTGACTGTCGGACACTCGGCGGATAAAGGGGGCGTGACTGCCATCGTCTACCTGTCTGCTTTTGTCCCCCAT
GAAAACGAGTCTCTTGCCGGCATGTTTGGAGGCAAGCTGCCCGCCTTCATGGAATTGCGGCAGGACCAGACCTGC
GGGGCATTCGATCCGGCCGCGGCCTTCTTCGGCGACTTATCCGCCGAGGACAGCGAATGGGCTACGAGGCTTTAT
GTTGCCGGGTGTCCTGTTAGCCCAATGCTGAGTCCCATCCCTGGAAACGATGTGGCTTGGCGATCGATCCCTTCG
GCTTATATCGTCTGCGAAAACGACGTCGCGCTTCCGCCCAAAGTCCAACGCGACATGATTGCCAGGGCCAGAGAG
CAGGGAATCAGGTTTGACGAGTACAGCGTGCAGGCTGACCACAGTCCGTTTATCAATAAGCCAGGGGAGATTACG
GAGATTATTGTCAATGTAATGCAGTCAGTCTCATTGAGGACTGCATGTATGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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