Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6820
Gene name
Locationscaffold_615:4930..6672
Strand-
Gene length (bp)1742
Transcript length (bp)1611
Coding sequence length (bp)1608
Protein length (aa) 536

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 1.9E-33 90 458

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 51 499 2.0E-44
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 90 462 7.0E-41
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 74 458 7.0E-41
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 18 517 2.0E-39
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 74 386 2.0E-37
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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 51 499 2.0E-44
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 90 462 7.0E-41
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 74 458 7.0E-41
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 18 517 2.0E-39
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 74 386 2.0E-37
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 75 442 2.0E-33
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 74 530 2.0E-32
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 30 527 2.0E-30
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 70 513 2.0E-26
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 65 399 4.0E-26
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 72 403 3.0E-25
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 36 522 1.0E-22
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 75 484 4.0E-22
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 25 359 6.0E-22
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 48 359 2.0E-21
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 37 507 1.0E-20
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 45 343 2.0E-20
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 5 534 3.0E-19
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 53 534 1.0E-18
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 52 456 3.0E-18
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 75 303 4.0E-16
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 34 336 5.0E-16
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 49 496 7.0E-16
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 57 293 1.0E-14
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 43 307 1.0E-13
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 158 316 2.0E-12
sp|P39398|LGOT_ECOLI Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 54 263 3.0E-11
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 45 372 8.0E-11
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 78 303 3.0E-08
sp|P37489|YYBO_BACSU Uncharacterized transporter YybO OS=Bacillus subtilis (strain 168) GN=yybO PE=3 SV=1 66 381 6.0E-08
sp|Q46916|GUDP_ECOLI Probable glucarate transporter OS=Escherichia coli (strain K12) GN=gudP PE=1 SV=1 78 282 6.0E-07
sp|O34456|EXUT_BACSU Hexuronate transporter OS=Bacillus subtilis (strain 168) GN=exuT PE=2 SV=1 79 189 2.0E-06
sp|P42237|GUDP_BACSU Probable glucarate transporter OS=Bacillus subtilis (strain 168) GN=gudP PE=3 SV=2 80 262 4.0E-06
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GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0009987 cellular process No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0005215 transporter activity No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 86 103 17
2 123 145 22
3 152 174 22
4 178 200 22
5 213 235 22
6 245 267 22
7 319 341 22
8 351 373 22
9 385 407 22
10 411 433 22
11 440 462 22
12 472 494 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6820
MSSSLSASSSASATSFFSTYSRLPPSPAEHHPLLQSDSNPHDPPRPTAMNATAKQADDSVEPAPDLDPERRALVE
KRLKRKLDARCSIFVLIYIMNYLDRQTISAARLKGLQDDLRLDNTQYATCLSILYVGYILMQVPSNMLINRIQRP
SLYISAAMVLWGLISTLSGVAHGFVSMLCTRFFLGFVEAAFLPGALLLLSKLYTRRELSTRNAILYCGNLISNAF
SALVGAAVLSNMQGILGHAAWRWLFFIEGATTMAIAVAAAFILPDLPHNTRGFTAEEKLVAQLRMTEDVGEADAD
SDEQGVFDGLIMALTDVKVYVVMLTVTAYVLGLSFNAFFPTLTGTLGFGYVPTLLMSSPPWLFSCILSLVVSWHS
DATQEKFWHIVGPLLLGIVGFAISMSTLNVAARYVALFLQAGSYAGYIIFYSWISSSFPRPPAKRAVAIAMINAI
SQLGNVAGSYVWDLKEDGYRKSYGIVLAMFCVAIAGSCVFRGMLNRLNRKLEASERRPVGEPPSTGDSIARRDET
LRMRKGFRYLV
Coding >Ophio5|6820
ATGTCATCATCATTATCGGCTTCATCCTCGGCTTCGGCCACCTCCTTCTTCTCCACTTACAGCCGTCTTCCTCCT
TCTCCTGCCGAGCATCATCCTCTCCTCCAGTCGGACTCTAATCCTCATGATCCTCCCCGCCCAACAGCCATGAAC
GCCACCGCCAAACAGGCTGACGACAGCGTCGAGCCTGCGCCGGACCTGGATCCGGAGAGACGGGCGCTGGTCGAG
AAGCGGCTCAAGCGGAAGCTGGACGCCCGTTGTAGCATCTTTGTCCTCATCTACATCATGAACTACCTGGATCGC
CAGACCATCAGCGCCGCTAGGCTCAAGGGTCTCCAGGACGACTTGCGCCTCGACAACACGCAGTACGCTACCTGT
CTGAGCATCCTCTACGTCGGATATATCCTCATGCAGGTGCCGTCCAACATGCTCATCAACCGTATCCAGCGGCCG
TCGCTGTACATCTCTGCCGCCATGGTTCTCTGGGGCCTCATCAGCACTCTCAGCGGCGTGGCCCACGGTTTCGTC
TCCATGCTCTGCACTCGCTTCTTTCTTGGCTTCGTCGAGGCCGCTTTCCTGCCGGGCGCACTGCTGCTGCTCTCC
AAGTTGTATACGCGTCGCGAGTTGTCAACTCGTAACGCCATCCTCTACTGCGGGAACCTCATCTCCAACGCCTTC
TCTGCCCTCGTCGGCGCCGCTGTCCTCTCCAACATGCAGGGAATTCTCGGACATGCCGCCTGGCGCTGGCTGTTC
TTCATCGAGGGGGCAACGACAATGGCCATTGCCGTCGCCGCCGCCTTTATCCTCCCGGATCTGCCGCACAACACG
CGCGGCTTTACGGCCGAGGAGAAGCTTGTTGCTCAGCTGCGCATGACGGAGGATGTCGGCGAGGCTGATGCCGAT
TCGGATGAGCAGGGTGTCTTTGACGGCTTGATCATGGCTCTGACCGACGTCAAGGTCTATGTCGTCATGCTCACC
GTCACGGCCTATGTCCTGGGCTTGTCCTTTAACGCCTTCTTCCCGACGCTTACCGGCACACTCGGCTTCGGCTAT
GTCCCCACGCTTCTGATGAGCTCTCCGCCCTGGCTCTTCTCCTGCATCCTTTCCCTTGTCGTGTCCTGGCACTCG
GATGCCACGCAGGAAAAGTTCTGGCACATCGTCGGCCCTCTCCTTCTCGGCATCGTGGGCTTTGCCATCAGCATG
TCTACTCTCAACGTTGCCGCCCGCTATGTCGCCCTCTTTTTGCAGGCAGGGTCCTATGCCGGCTACATCATCTTC
TACTCCTGGATCAGCTCATCCTTCCCTCGTCCCCCGGCAAAGCGGGCCGTCGCCATCGCCATGATCAACGCCATC
AGCCAGCTCGGCAATGTGGCTGGGTCTTACGTCTGGGACCTGAAGGAGGACGGCTATCGCAAGAGCTACGGCATA
GTGCTCGCCATGTTCTGTGTGGCCATTGCCGGAAGCTGCGTCTTCAGGGGCATGCTGAACCGGCTGAACAGGAAG
CTCGAGGCAAGCGAGAGACGGCCTGTGGGCGAGCCGCCGTCGACCGGGGATTCTATTGCGCGCCGTGACGAGACG
TTGCGGATGCGAAAGGGGTTCAGATACCTGGTA
Transcript >Ophio5|6820
ATGTCATCATCATTATCGGCTTCATCCTCGGCTTCGGCCACCTCCTTCTTCTCCACTTACAGCCGTCTTCCTCCT
TCTCCTGCCGAGCATCATCCTCTCCTCCAGTCGGACTCTAATCCTCATGATCCTCCCCGCCCAACAGCCATGAAC
GCCACCGCCAAACAGGCTGACGACAGCGTCGAGCCTGCGCCGGACCTGGATCCGGAGAGACGGGCGCTGGTCGAG
AAGCGGCTCAAGCGGAAGCTGGACGCCCGTTGTAGCATCTTTGTCCTCATCTACATCATGAACTACCTGGATCGC
CAGACCATCAGCGCCGCTAGGCTCAAGGGTCTCCAGGACGACTTGCGCCTCGACAACACGCAGTACGCTACCTGT
CTGAGCATCCTCTACGTCGGATATATCCTCATGCAGGTGCCGTCCAACATGCTCATCAACCGTATCCAGCGGCCG
TCGCTGTACATCTCTGCCGCCATGGTTCTCTGGGGCCTCATCAGCACTCTCAGCGGCGTGGCCCACGGTTTCGTC
TCCATGCTCTGCACTCGCTTCTTTCTTGGCTTCGTCGAGGCCGCTTTCCTGCCGGGCGCACTGCTGCTGCTCTCC
AAGTTGTATACGCGTCGCGAGTTGTCAACTCGTAACGCCATCCTCTACTGCGGGAACCTCATCTCCAACGCCTTC
TCTGCCCTCGTCGGCGCCGCTGTCCTCTCCAACATGCAGGGAATTCTCGGACATGCCGCCTGGCGCTGGCTGTTC
TTCATCGAGGGGGCAACGACAATGGCCATTGCCGTCGCCGCCGCCTTTATCCTCCCGGATCTGCCGCACAACACG
CGCGGCTTTACGGCCGAGGAGAAGCTTGTTGCTCAGCTGCGCATGACGGAGGATGTCGGCGAGGCTGATGCCGAT
TCGGATGAGCAGGGTGTCTTTGACGGCTTGATCATGGCTCTGACCGACGTCAAGGTCTATGTCGTCATGCTCACC
GTCACGGCCTATGTCCTGGGCTTGTCCTTTAACGCCTTCTTCCCGACGCTTACCGGCACACTCGGCTTCGGCTAT
GTCCCCACGCTTCTGATGAGCTCTCCGCCCTGGCTCTTCTCCTGCATCCTTTCCCTTGTCGTGTCCTGGCACTCG
GATGCCACGCAGGAAAAGTTCTGGCACATCGTCGGCCCTCTCCTTCTCGGCATCGTGGGCTTTGCCATCAGCATG
TCTACTCTCAACGTTGCCGCCCGCTATGTCGCCCTCTTTTTGCAGGCAGGGTCCTATGCCGGCTACATCATCTTC
TACTCCTGGATCAGCTCATCCTTCCCTCGTCCCCCGGCAAAGCGGGCCGTCGCCATCGCCATGATCAACGCCATC
AGCCAGCTCGGCAATGTGGCTGGGTCTTACGTCTGGGACCTGAAGGAGGACGGCTATCGCAAGAGCTACGGCATA
GTGCTCGCCATGTTCTGTGTGGCCATTGCCGGAAGCTGCGTCTTCAGGGGCATGCTGAACCGGCTGAACAGGAAG
CTCGAGGCAAGCGAGAGACGGCCTGTGGGCGAGCCGCCGTCGACCGGGGATTCTATTGCGCGCCGTGACGAGACG
TTGCGGATGCGAAAGGGGTTCAGATACCTGGTATGA
Gene >Ophio5|6820
ATGTCATCATCATTATCGGCTTCATCCTCGGCTTCGGCCACCTCCTTCTTCTCCACTTACAGCCGTCTTCCTCCT
TCTCCTGCCGAGCATCATCCTCTCCTCCAGTCGGACTCTAATCCTCATGATCCTCCCCGCCCAACAGCCATGAAC
GCCACCGCCAAACAGGCTGACGACAGCGTCGAGCCTGCGCCGGACCTGGATCCGGAGAGACGGGCGCTGGTCGAG
AAGCGGCTCAAGCGGAAGCTGGACGCCCGTTGTAGCATCTTTGTCCTCATCTACATCATGAACTACCTGGATCGC
CAGACCATCAGCGCCGCTAGGCTCAAGGGTCTCCAGGACGACTTGCGCCTCGACAACACGCAGTACGCTACCTGT
CTGAGCATCCTCTACGTCGGATATATCCTCATGCAGGTGCCGTCCAACATGCTCATCAACCGTATCCAGCGGCCG
TCGCTGTACATCTCTGCCGCCATGGTTCTCTGGGGCCTCATCAGCACTCTCAGCGGCGTGGCCCACGGTTTCGTC
TCCATGCTCTGCACTCGCTTCTTTCTTGGCTTCGTCGAGGCCGCTTTCCTGCCGGGCGCACTGCTGCTGCTCTCC
AAGTTGTATACGCGTCGCGAGTTGTCAACTCGTAACGCCATCCTCTACTGCGGGAACCTCATCTCCAACGCCTTC
TCTGCCCTCGTCGGCGCCGCTGTCCTCTCCAACATGCAGGGAATTCTCGGACATGCCGCCTGGCGCTGGCTGTTC
TTCATCGAGGGGGCAACGACAATGGCCATTGCCGTCGCCGCCGCCTTTATCCTCCCGGATCTGCCGCACAACACG
CGCGGCTTTACGGCCGAGGAGAAGCTTGTTGCTCAGCTGCGCATGACGGAGGATGTCGGCGAGGCTGATGCCGAT
TCGGATGAGCAGGGTGTCTTTGACGGCTTGATCATGGCTCTGACCGACGTCAAGGTCTATGTCGTCATGCTCACC
GTCACGGCCTATGTCCTGGGCTTGTCCTTTAACGCCTTCTTCGTAAGCCAAAACCCTCCGCGTCTTTCTGTCTGT
AAACGAACCAGGGCCTACCTAACTCGTAGCCGCAGCCGACGCTTACCGGCACACTCGGCTTCGGCTATGTCCCCA
CGCTTCTGATGAGCTCTCCGCCCTGGCTCTTCTCCTGCATCCTTTCCCTTGTCGTGTCCTGGCACTCGGATGCCA
CGCAGGAAAAGGTCAGCCAAATACATGTGCTCCCGTGCCCCTTCCTGCCCTTGAGGCTGACAGATGGCGTCAAGT
TCTGGCACATCGTCGGCCCTCTCCTTCTCGGCATCGTGGGCTTTGCCATCAGCATGTCTACTCTCAACGTTGCCG
CCCGCTATGTCGCCCTCTTTTTGCAGGCAGGGTCCTATGCCGGCTACATCATCTTCTACTCCTGGATCAGCTCAT
CCTTCCCTCGTCCCCCGGCAAAGCGGGCCGTCGCCATCGCCATGATCAACGCCATCAGCCAGCTCGGCAATGTGG
CTGGGTCTTACGTCTGGGACCTGAAGGAGGACGGCTATCGCAAGAGCTACGGCATAGTGCTCGCCATGTTCTGTG
TGGCCATTGCCGGAAGCTGCGTCTTCAGGGGCATGCTGAACCGGCTGAACAGGAAGCTCGAGGCAAGCGAGAGAC
GGCCTGTGGGCGAGCCGCCGTCGACCGGGGATTCTATTGCGCGCCGTGACGAGACGTTGCGGATGCGAAAGGGGT
TCAGATACCTGGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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