Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6819
Gene name
Locationscaffold_615:3720..4788
Strand+
Gene length (bp)1068
Transcript length (bp)1068
Coding sequence length (bp)1065
Protein length (aa) 355

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01301 Glyco_hydro_35 Glycosyl hydrolases family 35 2.7E-17 4 73
PF13364 BetaGal_dom4_5 Beta-galactosidase jelly roll domain 1.2E-05 250 325

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q3UPY5|GLBL2_MOUSE Beta-galactosidase-1-like protein 2 OS=Mus musculus GN=Glb1l2 PE=1 SV=1 11 326 5.0E-43
sp|P48982|BGAL_XANMN Beta-galactosidase OS=Xanthomonas manihotis GN=bga PE=1 SV=1 3 308 1.0E-40
sp|P23780|BGAL_MOUSE Beta-galactosidase OS=Mus musculus GN=Glb1 PE=1 SV=1 19 328 2.0E-39
sp|Q54GE1|BGAL1_DICDI Beta-galactosidase 1 OS=Dictyostelium discoideum GN=glb1 PE=3 SV=1 11 326 3.0E-39
sp|Q8NCI6|GLBL3_HUMAN Beta-galactosidase-1-like protein 3 OS=Homo sapiens GN=GLB1L3 PE=2 SV=3 15 326 6.0E-39
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Swissprot ID Swissprot Description Start End E-value
sp|Q3UPY5|GLBL2_MOUSE Beta-galactosidase-1-like protein 2 OS=Mus musculus GN=Glb1l2 PE=1 SV=1 11 326 5.0E-43
sp|P48982|BGAL_XANMN Beta-galactosidase OS=Xanthomonas manihotis GN=bga PE=1 SV=1 3 308 1.0E-40
sp|P23780|BGAL_MOUSE Beta-galactosidase OS=Mus musculus GN=Glb1 PE=1 SV=1 19 328 2.0E-39
sp|Q54GE1|BGAL1_DICDI Beta-galactosidase 1 OS=Dictyostelium discoideum GN=glb1 PE=3 SV=1 11 326 3.0E-39
sp|Q8NCI6|GLBL3_HUMAN Beta-galactosidase-1-like protein 3 OS=Homo sapiens GN=GLB1L3 PE=2 SV=3 15 326 6.0E-39
sp|O19015|BGAL_FELCA Beta-galactosidase OS=Felis catus GN=GLB1 PE=2 SV=1 4 349 1.0E-38
sp|Q9TRY9|BGAL_CANLF Beta-galactosidase OS=Canis lupus familiaris GN=GLB1 PE=2 SV=3 5 328 2.0E-38
sp|Q8VC60|GLB1L_MOUSE Beta-galactosidase-1-like protein OS=Mus musculus GN=Glb1l PE=1 SV=1 17 336 1.0E-37
sp|Q8IW92|GLBL2_HUMAN Beta-galactosidase-1-like protein 2 OS=Homo sapiens GN=GLB1L2 PE=2 SV=1 11 326 1.0E-37
sp|Q6UWU2|GLB1L_HUMAN Beta-galactosidase-1-like protein OS=Homo sapiens GN=GLB1L PE=2 SV=1 17 336 1.0E-37
sp|Q60HF6|BGAL_MACFA Beta-galactosidase OS=Macaca fascicularis GN=GLB1 PE=2 SV=1 5 349 1.0E-37
sp|P16278|BGAL_HUMAN Beta-galactosidase OS=Homo sapiens GN=GLB1 PE=1 SV=2 2 328 2.0E-37
sp|Q58D55|BGAL_BOVIN Beta-galactosidase OS=Bos taurus GN=GLB1 PE=2 SV=1 19 328 3.0E-37
sp|Q95LV1|GLB1L_MACFA Beta-galactosidase-1-like protein OS=Macaca fascicularis GN=GLB1L PE=2 SV=1 17 336 4.0E-37
sp|Q5R7P4|BGAL_PONAB Beta-galactosidase OS=Pongo abelii GN=GLB1 PE=2 SV=1 2 328 8.0E-37
sp|A2RSQ1|GLBL3_MOUSE Beta-galactosidase-1-like protein 3 OS=Mus musculus GN=Glb1l3 PE=1 SV=1 17 326 5.0E-33
sp|Q5XIL5|GLBL3_RAT Beta-galactosidase-1-like protein 3 OS=Rattus norvegicus GN=Glb1l3 PE=2 SV=1 17 326 2.0E-32
sp|Q93Z24|BGA17_ARATH Beta-galactosidase 17 OS=Arabidopsis thaliana GN=BGAL17 PE=2 SV=1 4 328 8.0E-29
sp|Q0DGD7|BGAL8_ORYSJ Beta-galactosidase 8 OS=Oryza sativa subsp. japonica GN=Os05g0539400 PE=2 SV=1 4 327 1.0E-24
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6819
MDRTTSDLAWVLSGEDSFNIYMFHGGTNWGFDNGAVWSGDRSLAVTTSYDYGAPLDESGRPTELYHQIRETIAKH
VPAGSIPHVPAVPRLIQTGDIVLKPVLSLFDMLPKQPMIESAAPVPMEHMDQSYGFVLYQHTVEEEAEGILFVGD
GPRDRVLVYQNGHRVGIIDGTYSSPGRVRVRLNEGDLLQLLVENLGRVDKGHKFEDQRKGIVGNVTVGTRQTLER
WKTYSLPLTKLPRGLSRGDKVVVFHRQSPMFYTGSFRLAENAQPGLGSDMFLSIDKAIKGQVWVNGVNLGRYWAM
GPQQSLYLPGCYLNAAGRSNKIVVLELEPEANRPMVAKGLSSREWFNRPDPDSVV
Coding >Ophio5|6819
ATGGACCGCACCACGAGTGACCTGGCATGGGTTCTGTCAGGGGAAGATTCTTTCAATATCTACATGTTCCACGGC
GGAACAAACTGGGGCTTTGACAACGGTGCAGTCTGGTCTGGCGATCGAAGCTTGGCAGTGACGACGAGCTACGAC
TACGGCGCGCCTCTGGATGAATCCGGGAGGCCAACCGAATTGTACCACCAGATTCGTGAGACCATCGCCAAACAT
GTTCCCGCTGGAAGCATTCCTCATGTGCCGGCCGTACCAAGGCTCATCCAGACAGGCGACATCGTCCTCAAGCCA
GTGCTGTCCCTATTCGACATGCTACCAAAACAGCCCATGATCGAATCTGCCGCTCCGGTTCCCATGGAGCATATG
GACCAATCGTATGGTTTCGTCCTGTACCAACATACAGTTGAGGAGGAGGCCGAAGGAATTCTTTTCGTCGGAGAC
GGGCCACGCGATCGTGTCCTTGTATACCAGAACGGCCACAGAGTCGGCATCATCGACGGGACGTATTCTTCCCCT
GGGCGGGTGCGAGTAAGACTCAACGAGGGCGATTTGCTGCAGCTTCTGGTCGAGAACCTGGGCCGCGTCGACAAG
GGACACAAGTTCGAGGATCAACGAAAGGGCATCGTCGGCAACGTCACCGTCGGCACCCGACAAACTCTCGAGAGA
TGGAAGACATATTCCCTCCCGCTGACCAAACTTCCCAGGGGCTTATCAAGAGGTGACAAGGTCGTAGTATTCCAT
AGGCAATCTCCCATGTTCTACACGGGATCCTTCAGACTTGCCGAGAACGCCCAGCCCGGTCTCGGAAGCGACATG
TTTCTGTCCATCGACAAAGCTATCAAAGGCCAGGTCTGGGTCAACGGCGTCAACCTTGGGCGTTACTGGGCCATG
GGTCCTCAGCAGAGCCTATACTTGCCAGGGTGTTATCTCAATGCTGCTGGACGGTCCAACAAGATTGTCGTCCTG
GAGCTTGAGCCGGAGGCAAACAGGCCGATGGTTGCTAAAGGCCTCTCTTCCAGAGAATGGTTCAACAGACCAGAT
CCGGATTCCGTGGTG
Transcript >Ophio5|6819
ATGGACCGCACCACGAGTGACCTGGCATGGGTTCTGTCAGGGGAAGATTCTTTCAATATCTACATGTTCCACGGC
GGAACAAACTGGGGCTTTGACAACGGTGCAGTCTGGTCTGGCGATCGAAGCTTGGCAGTGACGACGAGCTACGAC
TACGGCGCGCCTCTGGATGAATCCGGGAGGCCAACCGAATTGTACCACCAGATTCGTGAGACCATCGCCAAACAT
GTTCCCGCTGGAAGCATTCCTCATGTGCCGGCCGTACCAAGGCTCATCCAGACAGGCGACATCGTCCTCAAGCCA
GTGCTGTCCCTATTCGACATGCTACCAAAACAGCCCATGATCGAATCTGCCGCTCCGGTTCCCATGGAGCATATG
GACCAATCGTATGGTTTCGTCCTGTACCAACATACAGTTGAGGAGGAGGCCGAAGGAATTCTTTTCGTCGGAGAC
GGGCCACGCGATCGTGTCCTTGTATACCAGAACGGCCACAGAGTCGGCATCATCGACGGGACGTATTCTTCCCCT
GGGCGGGTGCGAGTAAGACTCAACGAGGGCGATTTGCTGCAGCTTCTGGTCGAGAACCTGGGCCGCGTCGACAAG
GGACACAAGTTCGAGGATCAACGAAAGGGCATCGTCGGCAACGTCACCGTCGGCACCCGACAAACTCTCGAGAGA
TGGAAGACATATTCCCTCCCGCTGACCAAACTTCCCAGGGGCTTATCAAGAGGTGACAAGGTCGTAGTATTCCAT
AGGCAATCTCCCATGTTCTACACGGGATCCTTCAGACTTGCCGAGAACGCCCAGCCCGGTCTCGGAAGCGACATG
TTTCTGTCCATCGACAAAGCTATCAAAGGCCAGGTCTGGGTCAACGGCGTCAACCTTGGGCGTTACTGGGCCATG
GGTCCTCAGCAGAGCCTATACTTGCCAGGGTGTTATCTCAATGCTGCTGGACGGTCCAACAAGATTGTCGTCCTG
GAGCTTGAGCCGGAGGCAAACAGGCCGATGGTTGCTAAAGGCCTCTCTTCCAGAGAATGGTTCAACAGACCAGAT
CCGGATTCCGTGGTGTGA
Gene >Ophio5|6819
ATGGACCGCACCACGAGTGACCTGGCATGGGTTCTGTCAGGGGAAGATTCTTTCAATATCTACATGTTCCACGGC
GGAACAAACTGGGGCTTTGACAACGGTGCAGTCTGGTCTGGCGATCGAAGCTTGGCAGTGACGACGAGCTACGAC
TACGGCGCGCCTCTGGATGAATCCGGGAGGCCAACCGAATTGTACCACCAGATTCGTGAGACCATCGCCAAACAT
GTTCCCGCTGGAAGCATTCCTCATGTGCCGGCCGTACCAAGGCTCATCCAGACAGGCGACATCGTCCTCAAGCCA
GTGCTGTCCCTATTCGACATGCTACCAAAACAGCCCATGATCGAATCTGCCGCTCCGGTTCCCATGGAGCATATG
GACCAATCGTATGGTTTCGTCCTGTACCAACATACAGTTGAGGAGGAGGCCGAAGGAATTCTTTTCGTCGGAGAC
GGGCCACGCGATCGTGTCCTTGTATACCAGAACGGCCACAGAGTCGGCATCATCGACGGGACGTATTCTTCCCCT
GGGCGGGTGCGAGTAAGACTCAACGAGGGCGATTTGCTGCAGCTTCTGGTCGAGAACCTGGGCCGCGTCGACAAG
GGACACAAGTTCGAGGATCAACGAAAGGGCATCGTCGGCAACGTCACCGTCGGCACCCGACAAACTCTCGAGAGA
TGGAAGACATATTCCCTCCCGCTGACCAAACTTCCCAGGGGCTTATCAAGAGGTGACAAGGTCGTAGTATTCCAT
AGGCAATCTCCCATGTTCTACACGGGATCCTTCAGACTTGCCGAGAACGCCCAGCCCGGTCTCGGAAGCGACATG
TTTCTGTCCATCGACAAAGCTATCAAAGGCCAGGTCTGGGTCAACGGCGTCAACCTTGGGCGTTACTGGGCCATG
GGTCCTCAGCAGAGCCTATACTTGCCAGGGTGTTATCTCAATGCTGCTGGACGGTCCAACAAGATTGTCGTCCTG
GAGCTTGAGCCGGAGGCAAACAGGCCGATGGTTGCTAAAGGCCTCTCTTCCAGAGAATGGTTCAACAGACCAGAT
CCGGATTCCGTGGTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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