Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6805
Gene name
Locationscaffold_613:2221..3130
Strand-
Gene length (bp)909
Transcript length (bp)801
Coding sequence length (bp)798
Protein length (aa) 266

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 39 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 44 66 22
3 81 98 17
4 119 141 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6805
MVNLEWDPDHVPRAKLVLHTLQILFVFTIWCLEIAVFAGKDAKIVVNNAFTFTMCFVTVPAWLFLMMVPRFERGR
RFAEPRAMLVIDVLFTILWLSAFATQAAYNTANLCGQRCNLSKGIVGLGIFTTLLFAATSLISAYTLRYYNFHGT
LPGYDSRKLLPTNGSTSAIDPDKAAFSTADEDYERVNLDDHEAAGASNYSDSGRYAHANPYSADDFTDPNRYSPL
PPRNNDLFNTDTEYSSGGVAPKPFVDGPAQFPAGNYDRVHP
Coding >Ophio5|6805
ATGGTCAATTTAGAGTGGGATCCTGACCACGTGCCTCGGGCGAAGCTGGTCCTGCACACTCTACAGATCCTCTTC
GTCTTCACCATCTGGTGTCTGGAAATCGCAGTCTTCGCCGGCAAGGACGCCAAGATTGTCGTCAACAATGCCTTC
ACATTTACCATGTGCTTTGTGACCGTCCCCGCATGGCTCTTTCTGATGATGGTGCCTCGGTTCGAACGCGGACGT
CGCTTCGCTGAGCCGCGCGCCATGCTCGTCATCGACGTCCTCTTTACCATACTCTGGCTGTCGGCCTTTGCCACC
CAGGCTGCCTACAACACGGCCAACCTCTGCGGCCAGCGCTGCAACTTGAGCAAGGGCATTGTCGGGCTCGGTATC
TTTACCACCCTACTCTTCGCAGCCACGTCGCTTATCAGCGCATATACCCTCAGGTACTACAACTTCCACGGCACT
CTCCCCGGATACGACTCCCGCAAGCTGCTCCCCACAAACGGCAGCACCAGCGCCATCGACCCCGACAAGGCCGCC
TTCTCCACTGCCGACGAAGACTACGAGCGTGTCAACCTCGACGACCACGAGGCCGCCGGCGCTTCCAACTACTCC
GACTCCGGTCGCTACGCCCATGCCAACCCGTACAGCGCCGACGACTTTACCGATCCCAACCGCTACAGCCCGCTG
CCGCCGCGCAATAACGACCTCTTCAATACGGATACCGAGTACAGCTCAGGCGGCGTTGCCCCCAAGCCGTTTGTG
GACGGGCCTGCGCAGTTTCCCGCCGGCAACTACGATCGGGTGCATCCA
Transcript >Ophio5|6805
ATGGTCAATTTAGAGTGGGATCCTGACCACGTGCCTCGGGCGAAGCTGGTCCTGCACACTCTACAGATCCTCTTC
GTCTTCACCATCTGGTGTCTGGAAATCGCAGTCTTCGCCGGCAAGGACGCCAAGATTGTCGTCAACAATGCCTTC
ACATTTACCATGTGCTTTGTGACCGTCCCCGCATGGCTCTTTCTGATGATGGTGCCTCGGTTCGAACGCGGACGT
CGCTTCGCTGAGCCGCGCGCCATGCTCGTCATCGACGTCCTCTTTACCATACTCTGGCTGTCGGCCTTTGCCACC
CAGGCTGCCTACAACACGGCCAACCTCTGCGGCCAGCGCTGCAACTTGAGCAAGGGCATTGTCGGGCTCGGTATC
TTTACCACCCTACTCTTCGCAGCCACGTCGCTTATCAGCGCATATACCCTCAGGTACTACAACTTCCACGGCACT
CTCCCCGGATACGACTCCCGCAAGCTGCTCCCCACAAACGGCAGCACCAGCGCCATCGACCCCGACAAGGCCGCC
TTCTCCACTGCCGACGAAGACTACGAGCGTGTCAACCTCGACGACCACGAGGCCGCCGGCGCTTCCAACTACTCC
GACTCCGGTCGCTACGCCCATGCCAACCCGTACAGCGCCGACGACTTTACCGATCCCAACCGCTACAGCCCGCTG
CCGCCGCGCAATAACGACCTCTTCAATACGGATACCGAGTACAGCTCAGGCGGCGTTGCCCCCAAGCCGTTTGTG
GACGGGCCTGCGCAGTTTCCCGCCGGCAACTACGATCGGGTGCATCCATAG
Gene >Ophio5|6805
ATGGTCAATTTAGAGTGGGATCCTGACCACGTGCCTCGGGCGAAGCTGGTCCTGCACACTCTACAGATCCTCTTC
GTCTTCACCATCTGGTGTCTGGAAATCGCAGTCTTCGCCGGCAAGGACGCCAAGATTGTCGTCAACAATGCCTTC
ACATTTACCATGGTCAGTCCTCCCTAAGCGCAAACGACACCGTGTGGCTGACTCGTCCTCGCAGTGCTTTGTGAC
CGTCCCCGCATGGCTCTTTCTGATGATGGTGCCTCGGTTCGAACGCGGACGTCGCTTCGCTGAGCCGCGCGCCAT
GCTCGTCATCGACGTCCTCTTTACCATACTCTGGCTGTCGGCCTTTGCCACCCAGGCTGCCTACAACACGGCCAA
CCTCTGCGGCCAGCGCTGCAACTTGAGCAAGGGCATTGTCGGGCTCGGTATCTTTACCACGTACGTGCGGAACCC
ATTCTTCACTCACCCCCGAAGCTGACGCGCGTATCCACCAGCCTACTCTTCGCAGCCACGTCGCTTATCAGCGCA
TATACCCTCAGGTACTACAACTTCCACGGCACTCTCCCCGGATACGACTCCCGCAAGCTGCTCCCCACAAACGGC
AGCACCAGCGCCATCGACCCCGACAAGGCCGCCTTCTCCACTGCCGACGAAGACTACGAGCGTGTCAACCTCGAC
GACCACGAGGCCGCCGGCGCTTCCAACTACTCCGACTCCGGTCGCTACGCCCATGCCAACCCGTACAGCGCCGAC
GACTTTACCGATCCCAACCGCTACAGCCCGCTGCCGCCGCGCAATAACGACCTCTTCAATACGGATACCGAGTAC
AGCTCAGGCGGCGTTGCCCCCAAGCCGTTTGTGGACGGGCCTGCGCAGTTTCCCGCCGGCAACTACGATCGGGTG
CATCCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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