Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|675
Gene name
Locationscaffold_1181:359..929
Strand+
Gene length (bp)570
Transcript length (bp)300
Coding sequence length (bp)297
Protein length (aa) 99

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05347 Complex1_LYR Complex 1 protein (LYR family) 2.3E-11 5 63

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q945M1|NDUB9_ARATH NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Arabidopsis thaliana GN=CIB22 PE=1 SV=1 10 89 2.0E-19
sp|Q0MQE8|NDUB9_PONAB NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Pongo abelii GN=NDUFB9 PE=2 SV=3 1 84 1.0E-12
sp|Q9Y6M9|NDUB9_HUMAN NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Homo sapiens GN=NDUFB9 PE=1 SV=3 1 84 3.0E-12
sp|Q0MQF0|NDUB9_PANTR NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Pan troglodytes GN=NDUFB9 PE=2 SV=3 1 84 3.0E-12
sp|Q0MQE9|NDUB9_GORGO NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Gorilla gorilla gorilla GN=NDUFB9 PE=2 SV=3 1 84 4.0E-12
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[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q945M1|NDUB9_ARATH NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Arabidopsis thaliana GN=CIB22 PE=1 SV=1 10 89 2.0E-19
sp|Q0MQE8|NDUB9_PONAB NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Pongo abelii GN=NDUFB9 PE=2 SV=3 1 84 1.0E-12
sp|Q9Y6M9|NDUB9_HUMAN NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Homo sapiens GN=NDUFB9 PE=1 SV=3 1 84 3.0E-12
sp|Q0MQF0|NDUB9_PANTR NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Pan troglodytes GN=NDUFB9 PE=2 SV=3 1 84 3.0E-12
sp|Q0MQE9|NDUB9_GORGO NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Gorilla gorilla gorilla GN=NDUFB9 PE=2 SV=3 1 84 4.0E-12
sp|Q9CQJ8|NDUB9_MOUSE NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Mus musculus GN=Ndufb9 PE=1 SV=3 1 84 6.0E-12
sp|Q02369|NDUB9_BOVIN NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Bos taurus GN=NDUFB9 PE=1 SV=2 1 84 3.0E-11
sp|Q54NR3|NDUB9_DICDI NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Dictyostelium discoideum GN=ndufb9 PE=3 SV=1 1 93 2.0E-09
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Mitochondrion Mitochondrial transit peptide 0.2233 0.1514 0.0134 0.0586 0.976 0.0072 0.0246 0.0317 0.0358 0.0101

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup6168
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|5810
Ophiocordyceps camponoti-floridani Ophcf2|00086
Ophiocordyceps camponoti-rufipedis Ophun1|7436
Ophiocordyceps kimflemingae Ophio5|675 (this protein)
Ophiocordyceps subramaniannii Hirsu2|5177

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|675
MSTRRAALSLYRRALKLTLDWAVQRQLWRGQALYIRSLFEANRNVSDPRQQKALLSETEKLLDSWKHPDPYIPPT
APGGSKFERNLTSPVLDPPAASNK
Coding >Ophio5|675
ATGTCGACGCGCCGTGCGGCACTATCGCTCTACCGCCGCGCTCTCAAACTGACCTTGGACTGGGCTGTCCAGCGT
CAGTTGTGGCGCGGACAAGCTCTGTACATACGATCACTCTTTGAAGCCAACCGCAATGTGTCGGACCCAAGACAG
CAAAAGGCGCTTTTATCAGAGACAGAGAAATTACTTGACAGCTGGAAGCACCCAGATCCCTATATTCCCCCTACG
GCTCCTGGAGGTTCTAAATTCGAGCGCAACCTGACATCACCAGTTCTCGATCCACCCGCCGCATCGAATAAA
Transcript >Ophio5|675
ATGTCGACGCGCCGTGCGGCACTATCGCTCTACCGCCGCGCTCTCAAACTGACCTTGGACTGGGCTGTCCAGCGT
CAGTTGTGGCGCGGACAAGCTCTGTACATACGATCACTCTTTGAAGCCAACCGCAATGTGTCGGACCCAAGACAG
CAAAAGGCGCTTTTATCAGAGACAGAGAAATTACTTGACAGCTGGAAGCACCCAGATCCCTATATTCCCCCTACG
GCTCCTGGAGGTTCTAAATTCGAGCGCAACCTGACATCACCAGTTCTCGATCCACCCGCCGCATCGAATAAATAG
Gene >Ophio5|675
ATGTCGACGCGCCGTGCGGCACTGTCAGTCTCGCCCATGACTGTGGGCTGGCCCGCTTGCCTATCCTTTCACTAA
TACGACGAAGATCGCTCTACCGCCGCGCTCTCAAACTGACCTTGGACTGGGCTGTCCAGCGTCAGTTGTGGCGCG
GACAAGCTCTGTACATACGATCACTCTTTGAAGCCAACCGCAATGTGTCGGACCCAAGACAGCAAAAGGTGCTTA
ACTTCTGAATGCAATAACGTTAGCTCGGTGCATGGACAGCCACATTTTTAACTTAACATGGGAGCAAACTTTAGG
CGCTTTTATCAGAGACAGAGAAATTACTTGACAGCTGGAAGCACCCAGATCCCTATATTCCCCCTACGGCTCCTG
GAGGTAAGGATTCCAGGACCGCATCTCAACTTGGCTGCTAGACGTGGCTGATATTGTTACCATTACAGGTTCTAA
ATTCGAGCGCAACCTGACATCACCAGTTCTCGATCGTAAGACCTGTCCTTCCAGGCGATTGATGACATGGATTTG
ACAATGGCATGTTGCCTCTTAGCACCCGCCGCATCGAATAAATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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