Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6737
Gene name
Locationscaffold_601:8678..9950
Strand+
Gene length (bp)1272
Transcript length (bp)1113
Coding sequence length (bp)1110
Protein length (aa) 370

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04666 Glyco_transf_54 N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region 2.3E-05 18 63

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 194 213 19
2 234 256 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6737
MHLAQLNAGFWLAEPDRRLLCVGIPSINRTSESFLAYTVATLTDKLTAEDRASIRLVVLVADRWPQRHLAYGQPW
LARIADEVLVYGDGESSGENDDVYRTVPYNVYKEGPGRGTGRVENMRLDHSVLVETCRDYGSPYFALIEDDVVAS
ADWFAKLKKGLDYIESRSSKSKKDWIYLRLFYSEIFMGWNKEEWLSYSQNVLMVYAVVLLAFLARTVRRKRLNCK
SVVGGSTRFLALFMALVLGLWLPASITLYFVAGRVSTSRINPFTWSWHPAREMANYGCCAQGLVFPRRHLEGVLA
LLRRPPYAFAGDQMVEDYARDHGLAKWALEPSVLQHVGLRESSAGDRRAEVWNFSFERQQRKRRASHGSR
Coding >Ophio5|6737
ATGCACTTGGCCCAGCTCAACGCCGGCTTCTGGCTGGCCGAGCCGGACCGGAGGCTCCTATGCGTCGGCATTCCG
AGCATCAACCGCACGTCCGAGTCCTTCCTCGCCTACACGGTGGCGACGCTGACGGATAAGCTGACGGCCGAGGAC
CGGGCCTCCATCCGGCTCGTTGTCCTCGTCGCTGACAGGTGGCCGCAGAGACACCTGGCCTATGGCCAACCGTGG
CTGGCGCGCATCGCCGATGAGGTCCTCGTCTACGGCGACGGTGAGTCGAGCGGAGAAAACGATGACGTGTACCGT
ACCGTTCCATACAATGTGTACAAGGAGGGCCCGGGTCGCGGAACTGGGCGAGTCGAGAACATGCGTCTGGATCAC
TCGGTCCTCGTCGAGACGTGTCGCGACTATGGGTCTCCCTACTTTGCTCTGATCGAGGACGACGTGGTGGCGTCG
GCAGACTGGTTTGCGAAGCTGAAGAAGGGGCTGGACTATATCGAGTCTCGGAGCAGCAAGAGCAAAAAGGACTGG
ATCTATCTACGTCTGTTCTACTCGGAAATCTTCATGGGCTGGAACAAGGAAGAATGGCTGTCGTATTCCCAGAAT
GTGTTGATGGTGTATGCCGTCGTTTTGCTCGCCTTCCTAGCCCGGACGGTGCGGAGGAAGCGGCTCAACTGCAAG
TCGGTCGTCGGCGGATCCACGCGCTTCTTGGCCTTGTTCATGGCTCTCGTCCTGGGACTCTGGCTACCGGCCTCG
ATAACGCTCTACTTTGTGGCCGGACGGGTATCGACGAGTCGGATCAACCCATTCACATGGAGCTGGCATCCGGCA
CGCGAGATGGCAAACTACGGTTGCTGTGCGCAGGGGCTGGTATTTCCGCGACGACATCTTGAGGGGGTCCTGGCG
TTGCTCAGAAGACCTCCGTACGCTTTTGCCGGAGACCAGATGGTGGAGGATTACGCGAGAGATCACGGGCTCGCC
AAGTGGGCTCTGGAGCCCAGTGTGCTCCAGCACGTTGGGTTGAGGGAGTCGTCGGCGGGGGACCGGCGAGCTGAA
GTGTGGAATTTCAGCTTCGAGAGGCAGCAGCGGAAGAGGAGAGCATCACATGGCAGTCGT
Transcript >Ophio5|6737
ATGCACTTGGCCCAGCTCAACGCCGGCTTCTGGCTGGCCGAGCCGGACCGGAGGCTCCTATGCGTCGGCATTCCG
AGCATCAACCGCACGTCCGAGTCCTTCCTCGCCTACACGGTGGCGACGCTGACGGATAAGCTGACGGCCGAGGAC
CGGGCCTCCATCCGGCTCGTTGTCCTCGTCGCTGACAGGTGGCCGCAGAGACACCTGGCCTATGGCCAACCGTGG
CTGGCGCGCATCGCCGATGAGGTCCTCGTCTACGGCGACGGTGAGTCGAGCGGAGAAAACGATGACGTGTACCGT
ACCGTTCCATACAATGTGTACAAGGAGGGCCCGGGTCGCGGAACTGGGCGAGTCGAGAACATGCGTCTGGATCAC
TCGGTCCTCGTCGAGACGTGTCGCGACTATGGGTCTCCCTACTTTGCTCTGATCGAGGACGACGTGGTGGCGTCG
GCAGACTGGTTTGCGAAGCTGAAGAAGGGGCTGGACTATATCGAGTCTCGGAGCAGCAAGAGCAAAAAGGACTGG
ATCTATCTACGTCTGTTCTACTCGGAAATCTTCATGGGCTGGAACAAGGAAGAATGGCTGTCGTATTCCCAGAAT
GTGTTGATGGTGTATGCCGTCGTTTTGCTCGCCTTCCTAGCCCGGACGGTGCGGAGGAAGCGGCTCAACTGCAAG
TCGGTCGTCGGCGGATCCACGCGCTTCTTGGCCTTGTTCATGGCTCTCGTCCTGGGACTCTGGCTACCGGCCTCG
ATAACGCTCTACTTTGTGGCCGGACGGGTATCGACGAGTCGGATCAACCCATTCACATGGAGCTGGCATCCGGCA
CGCGAGATGGCAAACTACGGTTGCTGTGCGCAGGGGCTGGTATTTCCGCGACGACATCTTGAGGGGGTCCTGGCG
TTGCTCAGAAGACCTCCGTACGCTTTTGCCGGAGACCAGATGGTGGAGGATTACGCGAGAGATCACGGGCTCGCC
AAGTGGGCTCTGGAGCCCAGTGTGCTCCAGCACGTTGGGTTGAGGGAGTCGTCGGCGGGGGACCGGCGAGCTGAA
GTGTGGAATTTCAGCTTCGAGAGGCAGCAGCGGAAGAGGAGAGCATCACATGGCAGTCGTTGA
Gene >Ophio5|6737
ATGCACTTGGCCCAGCTCAACGCCGGCTTCTGGCTGGTATGGCTATTGCTCCTCCTATTCTGCTTCCTTAACTCG
TCCGACGACCCGTCCTCCCTCTTCTTCGACGGCAGCAAGGCCTACGAGCAGAAGTACTCGCTCCAGCGAGCCACC
GAGGCCAAAGACTATCTCCAACGTCTTACTGACAAGGTCAAGCAGGCCGAGCCGGACCGGAGGCTCCTATGCGTC
GGCATTCCGAGCATCAACCGCACGTCCGAGTCCTTCCTCGCCTACACGGTGGCGACGCTGACGGATAAGCTGACG
GCCGAGGACCGGGCCTCCATCCGGCTCGTTGTCCTCGTCGCTGACAGGTGGCCGCAGAGACACCTGGCCTATGGC
CAACCGTGGCTGGCGCGCATCGCCGATGAGGTCCTCGTCTACGGCGACGGTGAGTCGAGCGGAGAAAACGATGAC
GTGTACCGTACCGTTCCATACAATGTGTACAAGGAGGGCCCGGGTCGCGGAACTGGGCGAGTCGAGAACATGCGT
CTGGATCACTCGGTCCTCGTCGAGACGTGTCGCGACTATGGGTCTCCCTACTTTGCTCTGATCGAGGACGACGTG
GTGGCGTCGGCAGACTGGTTTGCGAAGCTGAAGAAGGGGCTGGACTATATCGAGTCTCGGAGCAGCAAGAGCAAA
AAGGACTGGATCTATCTACGTCTGTTCTACTCGGAAATCTTCATGGGCTGGAACAAGGAAGAATGGCTGTCGTAT
TCCCAGAATGTGTTGATGGTGTATGCCGTCGTTTTGCTCGCCTTCCTAGCCCGGACGGTGCGGAGGAAGCGGCTC
AACTGCAAGTCGGTCGTCGGCGGATCCACGCGCTTCTTGGCCTTGTTCATGGCTCTCGTCCTGGGACTCTGGCTA
CCGGCCTCGATAACGCTCTACTTTGTGGCCGGACGGGTATCGACGAGTCGGATCAACCCATTCACATGGAGCTGG
CATCCGGCACGCGAGATGGCAAACTACGGTTGCTGTGCGCAGGGGCTGGTATTTCCGCGACGACATCTTGAGGGG
GTCCTGGCGTTGCTCAGAAGACCTCCGTACGCTTTTGCCGGAGACCAGATGGTGGAGGATTACGCGAGAGATCAC
GGGCTCGCCAAGTGGGCTCTGGAGCCCAGTGTGCTCCAGCACGTTGGGTTGAGGGAGTCGTCGGCGGGGGACCGG
CGAGCTGAAGTGTGGAATTTCAGCTTCGAGAGGCAGCAGCGGAAGAGGAGAGCATCACATGGCAGTCGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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