Protein ID | Ophio5|6728 |
Gene name | |
Location | scaffold_60:44521..46073 |
Strand | - |
Gene length (bp) | 1552 |
Transcript length (bp) | 1425 |
Coding sequence length (bp) | 1422 |
Protein length (aa) | 474 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04253 | TFR_dimer | Transferrin receptor-like dimerisation domain | 1.4E-21 | 353 | 467 |
PF04389 | Peptidase_M28 | Peptidase family M28 | 5.1E-13 | 79 | 247 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4B1R0|GCP1_ARTBC | Probable glutamate carboxypeptidase ARB_02390 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02390 PE=1 SV=1 | 12 | 468 | 3.0E-51 |
sp|Q7M758|NALDL_MOUSE | N-acetylated-alpha-linked acidic dipeptidase-like protein OS=Mus musculus GN=Naaladl1 PE=2 SV=1 | 4 | 313 | 6.0E-50 |
sp|Q9CZR2|NALD2_MOUSE | N-acetylated-alpha-linked acidic dipeptidase 2 OS=Mus musculus GN=Naalad2 PE=1 SV=2 | 1 | 468 | 2.0E-49 |
sp|Q9M1S8|GCP2_ARATH | Probable glutamate carboxypeptidase 2 OS=Arabidopsis thaliana GN=AMP1 PE=1 SV=3 | 12 | 467 | 2.0E-48 |
sp|O54697|NALDL_RAT | N-acetylated-alpha-linked acidic dipeptidase-like protein OS=Rattus norvegicus GN=Naaladl1 PE=1 SV=1 | 8 | 313 | 5.0E-48 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4B1R0|GCP1_ARTBC | Probable glutamate carboxypeptidase ARB_02390 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02390 PE=1 SV=1 | 12 | 468 | 3.0E-51 |
sp|Q7M758|NALDL_MOUSE | N-acetylated-alpha-linked acidic dipeptidase-like protein OS=Mus musculus GN=Naaladl1 PE=2 SV=1 | 4 | 313 | 6.0E-50 |
sp|Q9CZR2|NALD2_MOUSE | N-acetylated-alpha-linked acidic dipeptidase 2 OS=Mus musculus GN=Naalad2 PE=1 SV=2 | 1 | 468 | 2.0E-49 |
sp|Q9M1S8|GCP2_ARATH | Probable glutamate carboxypeptidase 2 OS=Arabidopsis thaliana GN=AMP1 PE=1 SV=3 | 12 | 467 | 2.0E-48 |
sp|O54697|NALDL_RAT | N-acetylated-alpha-linked acidic dipeptidase-like protein OS=Rattus norvegicus GN=Naaladl1 PE=1 SV=1 | 8 | 313 | 5.0E-48 |
sp|P70627|FOLH1_RAT | Glutamate carboxypeptidase 2 OS=Rattus norvegicus GN=Folh1 PE=1 SV=1 | 3 | 467 | 6.0E-48 |
sp|Q9UQQ1|NALDL_HUMAN | N-acetylated-alpha-linked acidic dipeptidase-like protein OS=Homo sapiens GN=NAALADL1 PE=1 SV=2 | 8 | 467 | 1.0E-47 |
sp|Q04609|FOLH1_HUMAN | Glutamate carboxypeptidase 2 OS=Homo sapiens GN=FOLH1 PE=1 SV=1 | 3 | 468 | 1.0E-46 |
sp|Q9Y3Q0|NALD2_HUMAN | N-acetylated-alpha-linked acidic dipeptidase 2 OS=Homo sapiens GN=NAALAD2 PE=1 SV=1 | 1 | 318 | 2.0E-46 |
sp|O77564|FOLH1_PIG | Glutamate carboxypeptidase 2 OS=Sus scrofa GN=FOLH1 PE=1 SV=1 | 1 | 467 | 2.0E-44 |
sp|O35409|FOLH1_MOUSE | Glutamate carboxypeptidase 2 OS=Mus musculus GN=Folh1 PE=1 SV=2 | 3 | 467 | 3.0E-42 |
sp|O43023|YGV9_SCHPO | Inactive zinc metalloprotease C354.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC354.09c PE=3 SV=1 | 9 | 463 | 2.0E-41 |
sp|Q9HBA9|FOH1B_HUMAN | Putative N-acetylated-alpha-linked acidic dipeptidase OS=Homo sapiens GN=FOLH1B PE=2 SV=1 | 38 | 468 | 2.0E-40 |
sp|Q5WN23|GCP2_CAEBR | Glutamate carboxypeptidase 2 homolog OS=Caenorhabditis briggsae GN=CBG08178 PE=3 SV=1 | 9 | 313 | 1.0E-37 |
sp|P91406|GCP2_CAEEL | Glutamate carboxypeptidase 2 homolog OS=Caenorhabditis elegans GN=R57.1 PE=1 SV=2 | 9 | 313 | 8.0E-36 |
sp|P47161|VPS70_YEAST | Vacuolar protein sorting-associated protein 70 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS70 PE=1 SV=1 | 12 | 313 | 7.0E-33 |
sp|Q9UP52|TFR2_HUMAN | Transferrin receptor protein 2 OS=Homo sapiens GN=TFR2 PE=1 SV=1 | 8 | 319 | 1.0E-27 |
sp|B2GUY2|TFR2_RAT | Transferrin receptor protein 2 OS=Rattus norvegicus GN=Tfr2 PE=2 SV=1 | 5 | 319 | 2.0E-27 |
sp|Q9JKX3|TFR2_MOUSE | Transferrin receptor protein 2 OS=Mus musculus GN=Tfr2 PE=1 SV=2 | 5 | 319 | 2.0E-27 |
sp|Q2V905|TFR1_HORSE | Transferrin receptor protein 1 OS=Equus caballus GN=TFRC PE=2 SV=1 | 4 | 357 | 4.0E-25 |
sp|Q08919|TRE1_YEAST | Uncharacterized protein TRE1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRE1 PE=1 SV=1 | 5 | 464 | 1.0E-24 |
sp|Q9GLD3|TFR1_CANLF | Transferrin receptor protein 1 OS=Canis lupus familiaris GN=TFRC PE=1 SV=1 | 4 | 357 | 4.0E-24 |
sp|Q9MYZ3|TFR1_FELCA | Transferrin receptor protein 1 OS=Felis catus GN=TFRC PE=1 SV=1 | 4 | 266 | 5.0E-24 |
sp|Q8HZV3|TFR1_PIG | Transferrin receptor protein 1 OS=Sus scrofa GN=TFRC PE=2 SV=1 | 4 | 267 | 2.0E-23 |
sp|Q08693|TRE2_YEAST | Putative zinc metalloprotease TRE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRE2 PE=1 SV=1 | 12 | 470 | 1.0E-21 |
sp|Q99376|TFR1_RAT | Transferrin receptor protein 1 (Fragment) OS=Rattus norvegicus GN=Tfrc PE=2 SV=1 | 4 | 357 | 5.0E-21 |
sp|Q07891|TFR1_CRIGR | Transferrin receptor protein 1 OS=Cricetulus griseus GN=TFRC PE=2 SV=1 | 4 | 266 | 8.0E-21 |
sp|Q5RDH6|TFR1_PONAB | Transferrin receptor protein 1 OS=Pongo abelii GN=TFRC PE=2 SV=1 | 8 | 267 | 3.0E-20 |
sp|P02786|TFR1_HUMAN | Transferrin receptor protein 1 OS=Homo sapiens GN=TFRC PE=1 SV=2 | 8 | 266 | 5.0E-20 |
sp|Q58DX5|NADL2_HUMAN | Inactive N-acetylated-alpha-linked acidic dipeptidase-like protein 2 OS=Homo sapiens GN=NAALADL2 PE=1 SV=3 | 77 | 303 | 2.0E-19 |
sp|Q90997|TFR1_CHICK | Transferrin receptor protein 1 OS=Gallus gallus GN=TFRC PE=2 SV=2 | 5 | 202 | 3.0E-19 |
sp|Q62351|TFR1_MOUSE | Transferrin receptor protein 1 OS=Mus musculus GN=Tfrc PE=1 SV=1 | 4 | 357 | 9.0E-19 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Extracellular | Signal peptide | 0.5725 | 0.1117 | 0.7828 | 0.1801 | 0.3203 | 0.0669 | 0.2042 | 0.5116 | 0.303 | 0.2718 |
Orthofinder run ID | 4 |
Orthogroup | 4186 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|6728 MRINETVGLVGIPSLPLAWRDAQELLRRLRGQGVRVPAGWAGGVPDLGDGWWTGNRTRTSPVVRLRNEQDEMDQQ PIWNVYGKILGQEQAERSILVGNHRDSWAFGAADPHAGTAVMIELARILGGLIARGWRPLRTIEFMSWDGAAYNL MGSTEFVEKRVQGLREGAYAYINLDAAVSGTRLQAAGSPAMQRPLERAMNHVFDARANQTLGELWRSKGGQLKGL GAGGDYAALQHMAGTSSLDLAFVDDQDNKGVPVAHSSYDRLALVEEVVDPGFTYHVLLAQLVGVLLLDLADRPVV PFGMTAYADVLKKEVADLDGWLTVRAEGGEKRAGGDGERQQRDQDKQRRQAMRELIDAAELVGSNAHDFDDWERE WDRTMLMKGGRESLELSGRRFRFNDKKAAFETALLDLELGGGHVVYGPELWSPRRAAVFPAIRDTVEAGDWAGAR RAIAKTAAILRRAGSVLTMEDEES |
Coding | >Ophio5|6728 ATGAGGATCAACGAGACGGTCGGCCTCGTCGGCATCCCGAGTCTACCGCTAGCCTGGCGCGACGCCCAGGAGTTA CTGCGTCGGCTGCGCGGCCAAGGCGTACGAGTGCCGGCCGGCTGGGCAGGCGGCGTGCCGGACCTGGGCGACGGC TGGTGGACCGGCAACCGGACCCGGACCTCGCCCGTGGTGCGGCTACGAAACGAGCAGGACGAGATGGATCAGCAG CCCATCTGGAATGTGTACGGCAAGATTCTGGGCCAGGAGCAGGCGGAGCGGTCCATCCTGGTGGGAAACCATCGC GACTCTTGGGCGTTTGGCGCCGCCGATCCGCATGCCGGCACGGCCGTCATGATTGAGTTGGCCCGCATCCTCGGA GGGCTCATCGCCCGCGGCTGGCGGCCTCTGCGGACCATCGAATTCATGTCGTGGGACGGCGCGGCGTACAACCTG ATGGGCTCGACCGAGTTCGTCGAGAAGCGGGTGCAAGGGCTGCGGGAGGGAGCCTACGCCTACATCAACCTCGAT GCCGCCGTCTCCGGCACGCGCCTTCAGGCGGCGGGCTCCCCGGCGATGCAGCGGCCACTGGAGCGGGCAATGAAC CATGTCTTTGATGCGCGGGCCAACCAGACGCTGGGCGAGCTGTGGAGATCCAAGGGCGGGCAGCTCAAGGGCCTC GGCGCGGGGGGCGACTACGCTGCGCTGCAGCACATGGCCGGCACCAGCTCGCTCGACCTGGCCTTTGTCGACGAC CAAGACAATAAGGGCGTCCCCGTCGCGCATTCGAGCTACGATAGGCTGGCGCTGGTCGAGGAGGTGGTGGACCCG GGCTTCACATACCACGTACTCCTGGCGCAGCTGGTGGGCGTGCTGCTGCTCGACCTGGCCGATCGGCCGGTGGTC CCGTTTGGGATGACGGCTTATGCTGACGTGTTGAAGAAGGAGGTGGCTGATTTGGATGGCTGGCTGACGGTTCGG GCCGAAGGAGGGGAGAAACGGGCTGGCGGGGATGGAGAGAGGCAACAACGAGATCAAGACAAGCAGCGGCGGCAA GCGATGCGGGAGCTCATCGACGCCGCCGAGCTGGTTGGCTCCAACGCCCACGACTTTGACGACTGGGAGCGCGAG TGGGACCGAACGATGCTGATGAAGGGCGGCCGGGAGTCTCTGGAGCTGTCGGGGCGGCGGTTCCGGTTCAATGAC AAGAAGGCGGCTTTTGAGACGGCCTTGCTGGACTTGGAGCTGGGGGGAGGCCACGTCGTCTACGGGCCCGAGTTG TGGTCTCCACGCCGCGCGGCCGTGTTCCCCGCCATCCGCGATACGGTCGAGGCCGGAGACTGGGCTGGGGCGAGG CGTGCGATTGCCAAGACGGCGGCGATACTGCGGAGGGCTGGTTCGGTGCTGACGATGGAGGATGAGGAGAGT |
Transcript | >Ophio5|6728 ATGAGGATCAACGAGACGGTCGGCCTCGTCGGCATCCCGAGTCTACCGCTAGCCTGGCGCGACGCCCAGGAGTTA CTGCGTCGGCTGCGCGGCCAAGGCGTACGAGTGCCGGCCGGCTGGGCAGGCGGCGTGCCGGACCTGGGCGACGGC TGGTGGACCGGCAACCGGACCCGGACCTCGCCCGTGGTGCGGCTACGAAACGAGCAGGACGAGATGGATCAGCAG CCCATCTGGAATGTGTACGGCAAGATTCTGGGCCAGGAGCAGGCGGAGCGGTCCATCCTGGTGGGAAACCATCGC GACTCTTGGGCGTTTGGCGCCGCCGATCCGCATGCCGGCACGGCCGTCATGATTGAGTTGGCCCGCATCCTCGGA GGGCTCATCGCCCGCGGCTGGCGGCCTCTGCGGACCATCGAATTCATGTCGTGGGACGGCGCGGCGTACAACCTG ATGGGCTCGACCGAGTTCGTCGAGAAGCGGGTGCAAGGGCTGCGGGAGGGAGCCTACGCCTACATCAACCTCGAT GCCGCCGTCTCCGGCACGCGCCTTCAGGCGGCGGGCTCCCCGGCGATGCAGCGGCCACTGGAGCGGGCAATGAAC CATGTCTTTGATGCGCGGGCCAACCAGACGCTGGGCGAGCTGTGGAGATCCAAGGGCGGGCAGCTCAAGGGCCTC GGCGCGGGGGGCGACTACGCTGCGCTGCAGCACATGGCCGGCACCAGCTCGCTCGACCTGGCCTTTGTCGACGAC CAAGACAATAAGGGCGTCCCCGTCGCGCATTCGAGCTACGATAGGCTGGCGCTGGTCGAGGAGGTGGTGGACCCG GGCTTCACATACCACGTACTCCTGGCGCAGCTGGTGGGCGTGCTGCTGCTCGACCTGGCCGATCGGCCGGTGGTC CCGTTTGGGATGACGGCTTATGCTGACGTGTTGAAGAAGGAGGTGGCTGATTTGGATGGCTGGCTGACGGTTCGG GCCGAAGGAGGGGAGAAACGGGCTGGCGGGGATGGAGAGAGGCAACAACGAGATCAAGACAAGCAGCGGCGGCAA GCGATGCGGGAGCTCATCGACGCCGCCGAGCTGGTTGGCTCCAACGCCCACGACTTTGACGACTGGGAGCGCGAG TGGGACCGAACGATGCTGATGAAGGGCGGCCGGGAGTCTCTGGAGCTGTCGGGGCGGCGGTTCCGGTTCAATGAC AAGAAGGCGGCTTTTGAGACGGCCTTGCTGGACTTGGAGCTGGGGGGAGGCCACGTCGTCTACGGGCCCGAGTTG TGGTCTCCACGCCGCGCGGCCGTGTTCCCCGCCATCCGCGATACGGTCGAGGCCGGAGACTGGGCTGGGGCGAGG CGTGCGATTGCCAAGACGGCGGCGATACTGCGGAGGGCTGGTTCGGTGCTGACGATGGAGGATGAGGAGAGTTGA |
Gene | >Ophio5|6728 ATGAGGATCAACGAGACGGTCGGCCTCGTCGGCATCCCGAGTCTACCGCTAGCCTGGCGCGACGCCCAGGAGTTA CTGCGTCGGCTGCGCGGCCAAGGCGTACGAGTGCCGGCCGGCTGGGCAGGCGGCGTGCCGGACCTGGGCGACGGC TGGTGGACCGGCAACCGGACCCGGACCTCGCCCGTGGTGCGGCTACGAAACGAGCAGGACGAGATGGATCAGCAG CCCATCTGGAATGTGTACGGCAAGATTCTGGGCCAGGAGCAGGCGGAGCGGTCCATCCTGGTGGGAAACCATCGC GACTCTTGGGCGTTTGGCGCCGCCGATCCGCATGCCGGCACGGCCGTCATGATTGAGTTGGCCCGCATCCTCGGA GGGCTCATCGCCCGCGGCTGGCGGCCTCTGCGGACCATCGAATTCATGTCGTGGGACGGCGCGGCGTACAACCTG ATGGGCTCGACCGAGTTCGTCGAGAAGCGGGTGCAAGGGCTGCGGGAGGGAGCCTACGCCTACATCAACCTCGAT GCCGCCGTCTCCGGCACGCGCCTTCAGGCGGCGGGCTCCCCGGCGATGCAGCGGCCACTGGAGCGGGCAATGAAC CATGTCTTTGATGCGCGGGCCAACCAGACGCTGGGCGAGCTGTGGAGATCCAAGGGCGGGCAGCTCAAGGGCCTC GGCGCGGGGGGCGACTACGCTGCGCTGCAGCACATGGCCGGCACCAGCTCGCTCGACCTGGCCTTTGTCGACGAC CAAGACAATAAGGGCGTCCCCGTCGCGCATTCGAGCTACGATAGGCTGGCGCTGGTCGAGGAGGTGGTGGACCCG GGCTTCACATACCACGTACTCCTGGCGCAGCTGGTGGGCGTGCTGCTGCTCGACCTGGCCGATCGGCCGGTGGTC CCGTTTGGGATGACGGCTTATGCTGACGTGTTGAAGAAGGAGGTGGCTGATTTGGATGGCTGGCTGACGGTTCGG GCCGAAGGAGGGGAGAAACGGGCTGGCGGGGATGGAGAGAGGCAACAACGAGATCAAGACAAGCAGCGGCGGCAA GCGATGCGGGAGCTCATCGACGCCGCCGAGCTGGTTGGCTCCAACGCCCACGACTTTGACGACTGGGAGCGCGAG TGGGACCGAACGATGCTGATGAAGGGCGGCCGGGAGTCTCTGGAGCTGTCGGGGCGGCGGTTCCGGTTCAATGAC AAGAAGGCGGCTTTTGAGACGGCCTTGCTGGACTTGGAGCTGGGGGGAGGCGTGAGTTTTTTGTTTTGTTTTTTT GGTCCTTTTTATTTCTCTCCCTACTTGGTCACTCTGTTTTCCGTGAAAGACAACACTGACGTCGGGGGCCCCTTT TCAGATCCCCAACCGCACGCAATACAAGCACGTCGTCTACGGGCCCGAGTTGTGGTCTCCACGCCGCGCGGCCGT GTTCCCCGCCATCCGCGATACGGTCGAGGCCGGAGACTGGGCTGGGGCGAGGCGTGCGATTGCCAAGACGGCGGC GATACTGCGGAGGGCTGGTTCGGTGCTGACGATGGAGGATGAGGAGAGTTGA |