Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6715
Gene name
Locationscaffold_60:7001..8822
Strand+
Gene length (bp)1821
Transcript length (bp)1668
Coding sequence length (bp)1665
Protein length (aa) 555

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00856 SET SET domain 3.5E-08 19 248
PF01753 zf-MYND MYND finger 1.1E-05 54 94

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9NRG4|SMYD2_HUMAN N-lysine methyltransferase SMYD2 OS=Homo sapiens GN=SMYD2 PE=1 SV=2 15 289 3.0E-21
sp|E1C5V0|SMYD2_CHICK N-lysine methyltransferase SMYD2 OS=Gallus gallus GN=SMYD2 PE=3 SV=1 14 294 3.0E-20
sp|Q7XJS0|ASHR1_ARATH Histone-lysine N-methyltransferase ASHR1 OS=Arabidopsis thaliana GN=ASHR1 PE=2 SV=2 16 274 1.0E-19
sp|C3RZA1|SMYD2_PIG N-lysine methyltransferase SMYD2 OS=Sus scrofa GN=SMYD2 PE=2 SV=1 15 274 2.0E-19
sp|Q5RGL7|SMY2B_DANRE N-lysine methyltransferase SMYD2-B OS=Danio rerio GN=smyd2b PE=2 SV=2 1 292 2.0E-19
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Swissprot ID Swissprot Description Start End E-value
sp|Q9NRG4|SMYD2_HUMAN N-lysine methyltransferase SMYD2 OS=Homo sapiens GN=SMYD2 PE=1 SV=2 15 289 3.0E-21
sp|E1C5V0|SMYD2_CHICK N-lysine methyltransferase SMYD2 OS=Gallus gallus GN=SMYD2 PE=3 SV=1 14 294 3.0E-20
sp|Q7XJS0|ASHR1_ARATH Histone-lysine N-methyltransferase ASHR1 OS=Arabidopsis thaliana GN=ASHR1 PE=2 SV=2 16 274 1.0E-19
sp|C3RZA1|SMYD2_PIG N-lysine methyltransferase SMYD2 OS=Sus scrofa GN=SMYD2 PE=2 SV=1 15 274 2.0E-19
sp|Q5RGL7|SMY2B_DANRE N-lysine methyltransferase SMYD2-B OS=Danio rerio GN=smyd2b PE=2 SV=2 1 292 2.0E-19
sp|Q0P585|SMYD2_BOVIN N-lysine methyltransferase SMYD2 OS=Bos taurus GN=SMYD2 PE=2 SV=1 15 274 2.0E-19
sp|Q9H7B4|SMYD3_HUMAN Histone-lysine N-methyltransferase SMYD3 OS=Homo sapiens GN=SMYD3 PE=1 SV=4 14 275 5.0E-19
sp|Q8R5A0|SMYD2_MOUSE N-lysine methyltransferase SMYD2 OS=Mus musculus GN=Smyd2 PE=1 SV=1 15 289 7.0E-19
sp|Q9CWR2|SMYD3_MOUSE Histone-lysine N-methyltransferase SMYD3 OS=Mus musculus GN=Smyd3 PE=2 SV=1 17 275 3.0E-18
sp|Q7M6Z3|SMYD2_RAT N-lysine methyltransferase SMYD2 OS=Rattus norvegicus GN=Smyd2 PE=1 SV=1 15 289 7.0E-18
sp|Q7ZXV5|SMY2A_XENLA N-lysine methyltransferase SMYD2-A OS=Xenopus laevis GN=smyd2-a PE=2 SV=1 15 289 7.0E-18
sp|O94256|SET6_SCHPO SET domain and MYND-type zinc finger protein 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=set6 PE=3 SV=1 1 277 3.0E-17
sp|Q5BJI7|SMY2A_DANRE N-lysine methyltransferase SMYD2-A OS=Danio rerio GN=smyd2a PE=2 SV=1 15 274 8.0E-17
sp|Q54D67|Y2454_DICDI SET and MYND domain-containing protein DDB_G0292454 OS=Dictyostelium discoideum GN=DDB_G0292454 PE=3 SV=1 18 278 2.0E-16
sp|Q6GN68|SMY2B_XENLA N-lysine methyltransferase SMYD2-B OS=Xenopus laevis GN=smyd2-b PE=2 SV=1 15 274 8.0E-16
sp|Q9ZUM9|ASHR2_ARATH Histone-lysine N-methyltransferase ASHR2 OS=Arabidopsis thaliana GN=ASHR2 PE=2 SV=3 18 279 8.0E-09
sp|Q557F7|Y3589_DICDI SET and MYND domain-containing protein DDB_G0273589 OS=Dictyostelium discoideum GN=DDB_G0273589 PE=3 SV=1 14 279 9.0E-09
sp|Q5PP37|ATXR2_ARATH Histone-lysine N-methyltransferase ATXR2 OS=Arabidopsis thaliana GN=ATXR2 PE=2 SV=1 197 277 8.0E-07
sp|Q6BSV3|SET5_DEBHA Potential protein lysine methyltransferase SET5 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=SET5 PE=3 SV=2 195 295 1.0E-05
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

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SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 55 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 76.85 41.89 111.81
CcL In ants, during behavior modification 91.91 49.24 134.58
CcD In ants, recently dead 92.47 49.70 135.24

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.467418 no
SC16a CcD 0.452557 no
CcL CcD 0.982237 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6715
MDAPSQPALQIGDASPDRGRGLFAAQAFRPGQTIQVFDRPLLALTATPLLERVCSHCLRVGEKKPRGCSRCCAAF
YCDAVCQSAAWAAVHGRECKALGRKRLRLDGAGGGLPARLPTPVRALVQALVCPDVETALGSLQGHRPCDGALTD
LLVMARAGCAFAGVEAGEKGTGAGAGLMRAVELLCKIQTNAFHRYDADLGQAGIFLEPTLAMANHSCIPNALVHF
VGRTAILTAERPIEPGDEVEISYTDYTYPLAKRGEALSSYGFDCRCQRCKEDLNVYQVRFTSSPDAILDNACLVS
PDDFFKLRSHPAIVDPATQSLARTDSETAVKSFESRPSSDEAPSTRRQMLLAQLRDCAGLATAGLWAVTPVPQIL
TELSINYAERGDFASALALACFIATSCDPYRYTACFHPTRIKNVLVVAKMLANTAEETAALSQAVERVTSRPKLE
RKLRETLRDIDQASLCQMLLIMVLQSVPAGRGGAEWELAMAARDMLRDIEQLPGRDQEVSLITAWTRDPTTDQSR
AFFDYAVVQRVDILAGLGRELLLVDLDTET
Coding >Ophio5|6715
ATGGACGCTCCCTCGCAGCCGGCGCTTCAGATCGGCGACGCCAGCCCCGACCGTGGCCGCGGCCTATTCGCCGCC
CAAGCCTTCCGGCCAGGCCAGACGATACAGGTCTTCGACCGGCCGCTACTGGCGCTGACGGCGACGCCGCTCCTG
GAACGCGTCTGTAGTCACTGCCTGCGGGTCGGGGAGAAGAAGCCGCGCGGCTGCTCGCGCTGCTGTGCCGCCTTC
TACTGCGACGCCGTGTGCCAGAGTGCTGCCTGGGCTGCGGTCCACGGGAGAGAATGTAAGGCGCTCGGCCGGAAA
AGGCTTCGCCTCGATGGTGCTGGCGGCGGCCTGCCTGCGCGGCTGCCGACTCCTGTGCGCGCCCTCGTTCAGGCC
CTCGTGTGCCCGGATGTCGAGACGGCGCTGGGCTCGCTTCAGGGTCATCGTCCCTGTGACGGTGCCTTGACGGAT
CTGCTCGTCATGGCCAGGGCGGGCTGTGCCTTTGCCGGCGTCGAGGCGGGTGAAAAAGGGACTGGTGCTGGTGCT
GGACTGATGAGGGCCGTGGAGCTGCTTTGCAAGATTCAGACCAACGCCTTTCACAGATATGATGCAGACCTGGGC
CAGGCCGGTATCTTCCTCGAACCGACGCTCGCCATGGCCAACCACTCGTGCATCCCAAACGCCCTGGTTCATTTC
GTCGGTCGAACGGCCATCTTGACGGCAGAGCGGCCCATCGAGCCCGGTGACGAAGTCGAAATCTCTTACACTGAC
TACACATACCCTCTCGCCAAGAGGGGCGAGGCGCTCTCGTCCTATGGCTTCGACTGTCGCTGTCAACGCTGCAAA
GAAGACCTCAACGTCTACCAGGTCCGCTTCACCTCCTCTCCAGACGCCATTCTCGACAACGCTTGCCTTGTGTCT
CCGGACGACTTTTTCAAACTCCGCAGCCATCCTGCCATTGTCGACCCGGCGACGCAGTCTCTGGCGAGGACTGAC
AGTGAGACGGCTGTCAAATCCTTCGAATCCCGGCCTTCATCTGACGAGGCTCCCTCGACGCGCCGCCAGATGCTG
CTTGCGCAGTTGCGAGACTGCGCCGGTCTGGCCACCGCCGGACTCTGGGCCGTGACTCCCGTGCCTCAGATACTA
ACGGAATTGTCCATCAACTATGCCGAGCGCGGCGACTTCGCCTCGGCGCTAGCTCTCGCCTGCTTCATCGCGACA
AGTTGCGATCCCTATCGGTACACGGCGTGCTTCCATCCCACCAGAATCAAGAACGTCCTCGTTGTTGCCAAGATG
CTCGCCAACACGGCCGAGGAGACGGCCGCCCTGAGCCAGGCCGTCGAGCGCGTCACGTCCCGGCCCAAGCTCGAG
AGGAAGCTCCGAGAGACGCTTCGCGACATCGACCAGGCCTCGCTGTGTCAGATGCTGCTCATCATGGTGTTGCAG
TCGGTCCCGGCCGGTCGCGGCGGCGCAGAGTGGGAGCTCGCCATGGCGGCCCGGGACATGCTACGGGACATTGAG
CAGCTGCCAGGTCGAGACCAGGAAGTCTCCCTCATCACAGCCTGGACGCGGGATCCGACGACCGACCAGTCTCGG
GCCTTTTTCGACTACGCCGTGGTGCAGCGGGTGGATATCTTGGCCGGTCTCGGGCGCGAATTGCTTCTCGTTGAC
TTGGATACCGAAACC
Transcript >Ophio5|6715
ATGGACGCTCCCTCGCAGCCGGCGCTTCAGATCGGCGACGCCAGCCCCGACCGTGGCCGCGGCCTATTCGCCGCC
CAAGCCTTCCGGCCAGGCCAGACGATACAGGTCTTCGACCGGCCGCTACTGGCGCTGACGGCGACGCCGCTCCTG
GAACGCGTCTGTAGTCACTGCCTGCGGGTCGGGGAGAAGAAGCCGCGCGGCTGCTCGCGCTGCTGTGCCGCCTTC
TACTGCGACGCCGTGTGCCAGAGTGCTGCCTGGGCTGCGGTCCACGGGAGAGAATGTAAGGCGCTCGGCCGGAAA
AGGCTTCGCCTCGATGGTGCTGGCGGCGGCCTGCCTGCGCGGCTGCCGACTCCTGTGCGCGCCCTCGTTCAGGCC
CTCGTGTGCCCGGATGTCGAGACGGCGCTGGGCTCGCTTCAGGGTCATCGTCCCTGTGACGGTGCCTTGACGGAT
CTGCTCGTCATGGCCAGGGCGGGCTGTGCCTTTGCCGGCGTCGAGGCGGGTGAAAAAGGGACTGGTGCTGGTGCT
GGACTGATGAGGGCCGTGGAGCTGCTTTGCAAGATTCAGACCAACGCCTTTCACAGATATGATGCAGACCTGGGC
CAGGCCGGTATCTTCCTCGAACCGACGCTCGCCATGGCCAACCACTCGTGCATCCCAAACGCCCTGGTTCATTTC
GTCGGTCGAACGGCCATCTTGACGGCAGAGCGGCCCATCGAGCCCGGTGACGAAGTCGAAATCTCTTACACTGAC
TACACATACCCTCTCGCCAAGAGGGGCGAGGCGCTCTCGTCCTATGGCTTCGACTGTCGCTGTCAACGCTGCAAA
GAAGACCTCAACGTCTACCAGGTCCGCTTCACCTCCTCTCCAGACGCCATTCTCGACAACGCTTGCCTTGTGTCT
CCGGACGACTTTTTCAAACTCCGCAGCCATCCTGCCATTGTCGACCCGGCGACGCAGTCTCTGGCGAGGACTGAC
AGTGAGACGGCTGTCAAATCCTTCGAATCCCGGCCTTCATCTGACGAGGCTCCCTCGACGCGCCGCCAGATGCTG
CTTGCGCAGTTGCGAGACTGCGCCGGTCTGGCCACCGCCGGACTCTGGGCCGTGACTCCCGTGCCTCAGATACTA
ACGGAATTGTCCATCAACTATGCCGAGCGCGGCGACTTCGCCTCGGCGCTAGCTCTCGCCTGCTTCATCGCGACA
AGTTGCGATCCCTATCGGTACACGGCGTGCTTCCATCCCACCAGAATCAAGAACGTCCTCGTTGTTGCCAAGATG
CTCGCCAACACGGCCGAGGAGACGGCCGCCCTGAGCCAGGCCGTCGAGCGCGTCACGTCCCGGCCCAAGCTCGAG
AGGAAGCTCCGAGAGACGCTTCGCGACATCGACCAGGCCTCGCTGTGTCAGATGCTGCTCATCATGGTGTTGCAG
TCGGTCCCGGCCGGTCGCGGCGGCGCAGAGTGGGAGCTCGCCATGGCGGCCCGGGACATGCTACGGGACATTGAG
CAGCTGCCAGGTCGAGACCAGGAAGTCTCCCTCATCACAGCCTGGACGCGGGATCCGACGACCGACCAGTCTCGG
GCCTTTTTCGACTACGCCGTGGTGCAGCGGGTGGATATCTTGGCCGGTCTCGGGCGCGAATTGCTTCTCGTTGAC
TTGGATACCGAAACCTGA
Gene >Ophio5|6715
ATGGACGCTCCCTCGCAGCCGGCGCTTCAGATCGGCGACGCCAGCCCCGACCGTGGCCGCGGCCTATTCGCCGCC
CAAGCCTTCCGGCCAGGCCAGACGATACAGGTCTTCGACCGGCCGCTACTGGCGCTGACGGCGACGCCGCTCCTG
GAACGCGTCTGTAGTCACTGCCTGCGGGTCGGGGAGAAGAAGCCGCGCGGCTGCTCGCGCTGCTGTGCCGCCTTC
TACTGCGACGCCGTGTGCCAGAGTGCTGCCTGGGCTGCGGTCCACGGGAGAGAATGTAAGGCGCTCGGCCGGAAA
AGGCTTCGCCTCGATGGTGCTGGCGGCGGCCTGCCTGCGCGGCTGCCGACTCCTGTGCGCGCCCTCGTTCAGGCC
CTCGTGTGCCCGGATGTCGAGACGGCGCTGGGCTCGCTTCAGGGTCATCGTCCCTGTGACGGTGCCTTGACGGAT
CTGCTCGTCATGGCCAGGGCGGGCTGTGCCTTTGCCGGCGTCGAGGCGGGTGAAAAAGGGACTGGTGCTGGTGCT
GGACTGATGAGGGCCGTGGAGCTGCTTTGCAAGGTTCGCCTACTCACCATCTCTAACCGTCCTAGTCGGCAGGGC
GCACGAGATTCTATAGCTCACACGTCGAGACATCCGCAGATTCAGACCAACGCCTTTCACAGATATGATGCAGAC
CTGGGCCAGGCCGGTATCTTCCTCGAACCGACGCTCGCCATGGCCAACCACTCGTGCATCCCAAACGCCCTGGTT
CATTTCGTCGGTCGAACGGCCATCTTGACGGCAGAGCGGCCCATCGAGCCCGGTGACGAAGTCGAAATCTCTTAC
ACTGGTCAGTCTACGTAGCGCACCGGCTTCGCTCTCCGCCAACGAGAATAATCTGGTAATCCGACATGTCATCCA
GACTACACATACCCTCTCGCCAAGAGGGGCGAGGCGCTCTCGTCCTATGGCTTCGACTGTCGCTGTCAACGCTGC
AAAGAAGACCTCAACGTCTACCAGGTCCGCTTCACCTCCTCTCCAGACGCCATTCTCGACAACGCTTGCCTTGTG
TCTCCGGACGACTTTTTCAAACTCCGCAGCCATCCTGCCATTGTCGACCCGGCGACGCAGTCTCTGGCGAGGACT
GACAGTGAGACGGCTGTCAAATCCTTCGAATCCCGGCCTTCATCTGACGAGGCTCCCTCGACGCGCCGCCAGATG
CTGCTTGCGCAGTTGCGAGACTGCGCCGGTCTGGCCACCGCCGGACTCTGGGCCGTGACTCCCGTGCCTCAGATA
CTAACGGAATTGTCCATCAACTATGCCGAGCGCGGCGACTTCGCCTCGGCGCTAGCTCTCGCCTGCTTCATCGCG
ACAAGTTGCGATCCCTATCGGTACACGGCGTGCTTCCATCCCACCAGAATCAAGAACGTCCTCGTTGTTGCCAAG
ATGCTCGCCAACACGGCCGAGGAGACGGCCGCCCTGAGCCAGGCCGTCGAGCGCGTCACGTCCCGGCCCAAGCTC
GAGAGGAAGCTCCGAGAGACGCTTCGCGACATCGACCAGGCCTCGCTGTGTCAGATGCTGCTCATCATGGTGTTG
CAGTCGGTCCCGGCCGGTCGCGGCGGCGCAGAGTGGGAGCTCGCCATGGCGGCCCGGGACATGCTACGGGACATT
GAGCAGCTGCCAGGTCGAGACCAGGAAGTCTCCCTCATCACAGCCTGGACGCGGGATCCGACGACCGACCAGTCT
CGGGCCTTTTTCGACTACGCCGTGGTGCAGCGGGTGGATATCTTGGCCGGTCTCGGGCGCGAATTGCTTCTCGTT
GACTTGGATACCGAAACCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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