Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6713
Gene name
Locationscaffold_60:1289..2140
Strand-
Gene length (bp)851
Transcript length (bp)780
Coding sequence length (bp)777
Protein length (aa) 259

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00462 Glutaredoxin Glutaredoxin 4.2E-12 148 210

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P38068|GLRX7_YEAST Monothiol glutaredoxin-7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX7 PE=1 SV=1 103 248 5.0E-20
sp|Q12438|GLRX6_YEAST Monothiol glutaredoxin-6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX6 PE=1 SV=1 131 251 3.0E-15
sp|B7ZFT1|GLRX1_RHIID Glutaredoxin-1 OS=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) GN=GRX1 PE=2 SV=3 136 238 4.0E-15
sp|Q0DAE4|GRXC8_ORYSJ Glutaredoxin-C8 OS=Oryza sativa subsp. japonica GN=GRXC8 PE=2 SV=2 143 235 2.0E-13
sp|Q9NS18|GLRX2_HUMAN Glutaredoxin-2, mitochondrial OS=Homo sapiens GN=GLRX2 PE=1 SV=1 138 233 3.0E-13
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Swissprot ID Swissprot Description Start End E-value
sp|P38068|GLRX7_YEAST Monothiol glutaredoxin-7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX7 PE=1 SV=1 103 248 5.0E-20
sp|Q12438|GLRX6_YEAST Monothiol glutaredoxin-6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX6 PE=1 SV=1 131 251 3.0E-15
sp|B7ZFT1|GLRX1_RHIID Glutaredoxin-1 OS=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) GN=GRX1 PE=2 SV=3 136 238 4.0E-15
sp|Q0DAE4|GRXC8_ORYSJ Glutaredoxin-C8 OS=Oryza sativa subsp. japonica GN=GRXC8 PE=2 SV=2 143 235 2.0E-13
sp|Q9NS18|GLRX2_HUMAN Glutaredoxin-2, mitochondrial OS=Homo sapiens GN=GLRX2 PE=1 SV=1 138 233 3.0E-13
sp|Q8LFQ6|GRXC4_ARATH Glutaredoxin-C4 OS=Arabidopsis thaliana GN=GRXC4 PE=2 SV=2 143 238 4.0E-13
sp|Q5RC53|GLRX2_PONAB Glutaredoxin-2, mitochondrial OS=Pongo abelii GN=GLRX2 PE=2 SV=1 138 233 1.0E-12
sp|Q32L67|GLRX2_BOVIN Glutaredoxin-2, mitochondrial OS=Bos taurus GN=GLRX2 PE=2 SV=1 110 233 2.0E-12
sp|Q6AXW1|GLRX2_RAT Glutaredoxin-2, mitochondrial OS=Rattus norvegicus GN=Glrx2 PE=2 SV=2 138 233 4.0E-12
sp|Q9UTI2|GLRX2_SCHPO Glutaredoxin-2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=grx2 PE=3 SV=1 135 247 5.0E-12
sp|Q6K953|GRXC4_ORYSJ Glutaredoxin-C4, chloroplastic OS=Oryza sativa subsp. japonica GN=GRXC4 PE=3 SV=1 128 233 2.0E-11
sp|Q923X4|GLRX2_MOUSE Glutaredoxin-2, mitochondrial OS=Mus musculus GN=Glrx2 PE=1 SV=1 138 233 3.0E-11
sp|P55142|GRXC6_ORYSJ Glutaredoxin-C6 OS=Oryza sativa subsp. japonica GN=GRXC6 PE=1 SV=2 141 233 2.0E-10
sp|Q9Y7N3|GLRX3_SCHPO Monothiol glutaredoxin-3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=grx3 PE=3 SV=3 141 224 9.0E-10
sp|Q6H628|GRXS6_ORYSJ Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica GN=GRXS6 PE=2 SV=1 148 239 2.0E-09
sp|Q0J3L4|GRS10_ORYSJ Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica GN=GRXS10 PE=2 SV=2 139 240 5.0E-09
sp|Q9FVX1|GRXC3_ARATH Glutaredoxin-C3 OS=Arabidopsis thaliana GN=GRXC3 PE=2 SV=1 139 238 7.0E-09
sp|Q54GP8|GLRX_DICDI Glutaredoxin OS=Dictyostelium discoideum GN=grxA PE=2 SV=1 142 233 1.0E-08
sp|Q9FNE2|GRXC2_ARATH Glutaredoxin-C2 OS=Arabidopsis thaliana GN=GRXC2 PE=2 SV=1 135 233 5.0E-08
sp|Q9ZR41|GLRX_SOLLC Glutaredoxin OS=Solanum lycopersicum PE=3 SV=1 141 233 1.0E-07
sp|P55143|GLRX_RICCO Glutaredoxin OS=Ricinus communis PE=3 SV=1 135 233 1.0E-07
sp|Q8L8T2|GRXC1_ARATH Glutaredoxin-C1 OS=Arabidopsis thaliana GN=GRXC1 PE=2 SV=2 141 234 2.0E-07
sp|P17695|GLRX2_YEAST Glutaredoxin-2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX2 PE=1 SV=3 141 235 4.0E-07
sp|O36032|GLRX1_SCHPO Glutaredoxin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=grx1 PE=3 SV=1 139 233 5.0E-07
sp|P25373|GLRX1_YEAST Glutaredoxin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX1 PE=1 SV=1 137 224 6.0E-07
sp|Q19297|YZ73_CAEEL Uncharacterized monothiol glutaredoxin F10D7.3 OS=Caenorhabditis elegans GN=F10D7.3 PE=3 SV=2 125 233 8.0E-06
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GO

GO Term Description Terminal node
GO:0097573 glutathione oxidoreductase activity Yes
GO:0015035 protein-disulfide reductase activity No
GO:0015036 disulfide oxidoreductase activity No
GO:0140096 catalytic activity, acting on a protein No
GO:0016491 oxidoreductase activity No
GO:0003824 catalytic activity No
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.5

Transmembrane Domains

Domain # Start End Length
1 7 26 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6713
MPSPRRLRLLMLATVVGVVFILFYASSFDDSASRDSRTIKDFYRKTMDGMKKGAPPGQAVLDRNRAANDYGDEQR
LASSTKERLRAAEEKAKAKANTKALRPDPPSQVVGVGNSADGQAKKPRPADVEPKKEFDAKQELDDMVKDRPVVI
FSKTTCPFSKHAKGILLEKYHINPPPFVVELDVHEYGKALQDELYRRTQQRTVPNIIINDGSGDIVSLGGSDDIV
ELDNAGSLARKIGDVSKGLSHVKLRRLAVNPRGL
Coding >Ophio5|6713
ATGCCGTCGCCGCGTCGCCTGCGGCTGCTGATGCTAGCCACGGTCGTCGGCGTCGTCTTCATCCTCTTCTATGCC
TCGAGCTTCGACGACTCGGCGAGCCGGGACTCGCGCACCATCAAAGACTTTTACCGCAAGACCATGGACGGCATG
AAAAAGGGCGCCCCACCGGGCCAGGCTGTCCTCGACCGGAATCGCGCCGCTAACGACTACGGGGATGAGCAGCGC
CTCGCTTCCAGTACCAAGGAGCGCCTCAGGGCGGCCGAGGAGAAGGCAAAGGCAAAGGCCAACACAAAGGCCCTC
CGTCCAGACCCCCCAAGCCAGGTCGTTGGCGTCGGCAACTCGGCAGACGGACAGGCGAAGAAGCCTCGTCCTGCC
GACGTGGAGCCCAAGAAGGAATTCGACGCCAAGCAGGAGCTTGATGACATGGTCAAGGATCGGCCCGTCGTCATC
TTCTCCAAGACGACATGCCCATTCTCGAAACACGCCAAGGGCATCCTCCTGGAAAAGTACCACATCAACCCCCCG
CCCTTCGTCGTCGAGCTCGACGTCCACGAATACGGCAAGGCCCTGCAGGACGAGCTGTACCGCAGGACGCAGCAA
CGCACGGTTCCCAACATCATCATCAACGACGGTAGCGGCGACATCGTCAGCCTGGGCGGCAGCGACGACATCGTC
GAGCTCGACAATGCCGGGAGCCTGGCGCGCAAGATTGGCGACGTCAGCAAGGGTCTTTCCCACGTCAAGCTGCGC
CGCCTCGCCGTCAACCCGCGTGGCCTG
Transcript >Ophio5|6713
ATGCCGTCGCCGCGTCGCCTGCGGCTGCTGATGCTAGCCACGGTCGTCGGCGTCGTCTTCATCCTCTTCTATGCC
TCGAGCTTCGACGACTCGGCGAGCCGGGACTCGCGCACCATCAAAGACTTTTACCGCAAGACCATGGACGGCATG
AAAAAGGGCGCCCCACCGGGCCAGGCTGTCCTCGACCGGAATCGCGCCGCTAACGACTACGGGGATGAGCAGCGC
CTCGCTTCCAGTACCAAGGAGCGCCTCAGGGCGGCCGAGGAGAAGGCAAAGGCAAAGGCCAACACAAAGGCCCTC
CGTCCAGACCCCCCAAGCCAGGTCGTTGGCGTCGGCAACTCGGCAGACGGACAGGCGAAGAAGCCTCGTCCTGCC
GACGTGGAGCCCAAGAAGGAATTCGACGCCAAGCAGGAGCTTGATGACATGGTCAAGGATCGGCCCGTCGTCATC
TTCTCCAAGACGACATGCCCATTCTCGAAACACGCCAAGGGCATCCTCCTGGAAAAGTACCACATCAACCCCCCG
CCCTTCGTCGTCGAGCTCGACGTCCACGAATACGGCAAGGCCCTGCAGGACGAGCTGTACCGCAGGACGCAGCAA
CGCACGGTTCCCAACATCATCATCAACGACGGTAGCGGCGACATCGTCAGCCTGGGCGGCAGCGACGACATCGTC
GAGCTCGACAATGCCGGGAGCCTGGCGCGCAAGATTGGCGACGTCAGCAAGGGTCTTTCCCACGTCAAGCTGCGC
CGCCTCGCCGTCAACCCGCGTGGCCTGTAG
Gene >Ophio5|6713
ATGCCGTCGCCGCGTCGCCTGCGGCTGCTGATGCTAGCCACGGTCGTCGGCGTCGTCTTCATCCTCTTCTATGCC
TCGAGCTTCGACGACTCGGCGAGCCGGGACTCGCGCACCATCAAAGACTTTTACCGCAAGACCATGGACGGCATG
AAAAAGGGCGCCCCACCGGGCCAGGCTGTCCTCGACCGGAATCGCGCCGCTAACGACTACGGGGATGAGCAGCGC
CTCGCTTCCAGTACCAAGGAGCGCCTCAGGGCGGCCGAGGAGAAGGCAAAGGCAAAGGCCAACACAAAGGCCCTC
CGTCCAGACCCCCCAAGCCAGGTCGTTGGCGTCGGCAACTCGGCAGACGGACAGGCGAAGAAGCCTCGTCCTGCC
GACGTGGAGCCCAAGAAGGAATTCGACGCCAAGCAGGAGCTTGATGACATGGTCAAGGATCGGCCCGGTACGGAA
CCCGTCACCCTCTCCCTCTTCCGCCGCTTCAGCTGGCTGACTTTCCCCCCCATCTCTCGCTAGTCGTCATCTTCT
CCAAGACGACATGCCCATTCTCGAAACACGCCAAGGGCATCCTCCTGGAAAAGTACCACATCAACCCCCCGCCCT
TCGTCGTCGAGCTCGACGTCCACGAATACGGCAAGGCCCTGCAGGACGAGCTGTACCGCAGGACGCAGCAACGCA
CGGTTCCCAACATCATCATCAACGACGGTAGCGGCGACATCGTCAGCCTGGGCGGCAGCGACGACATCGTCGAGC
TCGACAATGCCGGGAGCCTGGCGCGCAAGATTGGCGACGTCAGCAAGGGTCTTTCCCACGTCAAGCTGCGCCGCC
TCGCCGTCAACCCGCGTGGCCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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