Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6706
Gene name
Locationscaffold_6:94702..95982
Strand-
Gene length (bp)1280
Transcript length (bp)951
Coding sequence length (bp)948
Protein length (aa) 316

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6706
MVSLPALLMTGFGLLASGHTLLPAESSTVGLHTVGTLNERACWSQHTCRWLASWSGERLSDWKRWNTACADQALD
AAMEHHDAEVKNGSNLNLCQTTTMFFNATKDGLINCDIFSKERSRSCVEPSGVPGHHILEGLIRLHNGLHVALDL
VEHVRRVYLKKSQRFCYEFDFLRKGVMIPEHVVRQYSAFGAAMAMVQTLKSFMFWNDDQNDYANAAGAIPQYLNV
FFKYSMELAKSAPIHHDEDTSMQAQLARILASYSLVIRRVHKDLFSGSKMGNSMLKLLISSGKFSRSRQQINHSY
LSHNISGLFYAMILPV
Coding >Ophio5|6706
ATGGTGTCTCTACCCGCCCTGCTCATGACTGGCTTCGGCCTGCTCGCGTCCGGCCATACTCTCTTGCCTGCTGAA
AGTAGCACTGTTGGCCTACATACTGTTGGTACGCTTAACGAACGGGCGTGCTGGTCCCAGCATACCTGCCGTTGG
CTGGCTTCCTGGTCGGGAGAGCGTTTGTCCGATTGGAAGCGATGGAATACGGCCTGCGCCGACCAAGCCTTGGAC
GCGGCCATGGAGCATCACGATGCCGAGGTCAAGAACGGAAGCAATCTCAACCTCTGCCAAACAACGACAATGTTC
TTCAACGCCACAAAGGATGGCTTGATCAACTGCGACATCTTTAGCAAAGAAAGGAGCAGATCCTGTGTGGAACCT
TCTGGCGTGCCTGGGCACCACATTCTCGAAGGCCTGATCAGGTTGCACAATGGTTTACATGTCGCCCTCGACTTG
GTCGAGCATGTGCGACGAGTTTATTTGAAAAAGTCTCAGCGTTTTTGCTACGAATTTGACTTCCTCCGAAAGGGG
GTTATGATTCCCGAACATGTGGTAAGGCAGTATTCCGCTTTTGGCGCTGCGATGGCCATGGTTCAAACTCTAAAG
AGCTTCATGTTTTGGAACGATGATCAAAATGACTATGCCAACGCCGCTGGTGCCATTCCGCAGTACCTTAATGTC
TTCTTCAAGTACTCTATGGAGCTGGCTAAAAGTGCCCCAATCCACCATGATGAAGATACATCGATGCAGGCCCAG
CTAGCCAGGATCCTCGCCTCTTACAGCCTTGTTATAAGGCGTGTACATAAAGATCTCTTCAGTGGCTCCAAGATG
GGCAACAGCATGCTGAAGTTACTGATTAGTAGCGGCAAGTTTTCGAGGTCGAGACAACAGATAAACCATTCCTAC
CTGTCACATAACATTTCTGGACTCTTCTACGCCATGATTCTTCCCGTA
Transcript >Ophio5|6706
ATGGTGTCTCTACCCGCCCTGCTCATGACTGGCTTCGGCCTGCTCGCGTCCGGCCATACTCTCTTGCCTGCTGAA
AGTAGCACTGTTGGCCTACATACTGTTGGTACGCTTAACGAACGGGCGTGCTGGTCCCAGCATACCTGCCGTTGG
CTGGCTTCCTGGTCGGGAGAGCGTTTGTCCGATTGGAAGCGATGGAATACGGCCTGCGCCGACCAAGCCTTGGAC
GCGGCCATGGAGCATCACGATGCCGAGGTCAAGAACGGAAGCAATCTCAACCTCTGCCAAACAACGACAATGTTC
TTCAACGCCACAAAGGATGGCTTGATCAACTGCGACATCTTTAGCAAAGAAAGGAGCAGATCCTGTGTGGAACCT
TCTGGCGTGCCTGGGCACCACATTCTCGAAGGCCTGATCAGGTTGCACAATGGTTTACATGTCGCCCTCGACTTG
GTCGAGCATGTGCGACGAGTTTATTTGAAAAAGTCTCAGCGTTTTTGCTACGAATTTGACTTCCTCCGAAAGGGG
GTTATGATTCCCGAACATGTGGTAAGGCAGTATTCCGCTTTTGGCGCTGCGATGGCCATGGTTCAAACTCTAAAG
AGCTTCATGTTTTGGAACGATGATCAAAATGACTATGCCAACGCCGCTGGTGCCATTCCGCAGTACCTTAATGTC
TTCTTCAAGTACTCTATGGAGCTGGCTAAAAGTGCCCCAATCCACCATGATGAAGATACATCGATGCAGGCCCAG
CTAGCCAGGATCCTCGCCTCTTACAGCCTTGTTATAAGGCGTGTACATAAAGATCTCTTCAGTGGCTCCAAGATG
GGCAACAGCATGCTGAAGTTACTGATTAGTAGCGGCAAGTTTTCGAGGTCGAGACAACAGATAAACCATTCCTAC
CTGTCACATAACATTTCTGGACTCTTCTACGCCATGATTCTTCCCGTATAG
Gene >Ophio5|6706
ATGGTGTCTCTACCCGCCCTGCTCATGACTGGCTTCGGCCTGCTCGCGTCCGGCCATACTCTCTTGCCTGCTGAA
AGTAGCACTGTTGGCCTACATACTGTTGGTACGCTTAACGAACGGGCGTGCTGGTCCCAGCATACCTGCCGTTGG
CTGGCTTCCTGGTCGGGAGAGCGTTTGTCCGATTGGAAGCGATGGAATACGGCCTGCGCCGACCAAGCCTTGGAC
GCGGCCATGGAGCATCACGATGCCGAGGTCAAGAACGGAAGCAATCTCAACCTCTGCCAAACAACGACAATGTTC
TTCAACGCCACAAAGGATGGCTTGATCAACTGCGACATCTTTAGCAAAGAAAGGAGCAGATCCTGTGTGGAACCT
TCTGGCGTGCCTGGGCACCACATTCTCGAAGGCCTGATCAGGTTGCACAATGTGAGCACTCGGCCATAACGGCTG
AGGAAGCCTCAAACGACCCTTTTAACTTAATTAAATGACCAGGGTTTACATGTCGCCCTCGACTTGGTCGAGCAT
GTGCGACGAGTTTATTTGAAAAAGTCTCAGCGTTTTTGCTACGAATTTGACTTCCTCCGAAAGGGGGTTATGATT
CCCGAACATGTGGTAAGGCAGTATTCCGCTTTTGGCGCTGCGATGGCCATGGTTCAAACTCTAAAGAGCTGTGAG
TTGTTGCATTGCTTTGACCGAACTGCGAAGGAGATTAACTCCGTGTTTTCCTCACAGTCATGTTTTGGAACGATG
ATCAAAATGACTATGCCAACGCCGCTGGTGCCATTCCGCAGTACCTTAATGTCTTCTTCAAGTACTCTATGGAGC
TGGCTAAAAGTGCCCCGTGAGTTACCCAAATAGCTGATGAAGGGACATTGAGAAGCTGATCCGGGCCCGTCGTTG
AGCCAAGAATCCACCATGATGAAGATACATCGATGCAGGCCCAGCTAGCCAGGATCCTCGCCTCTTACAGCCTTG
TTATAAGGCGTGTACATAAAGATCTCTTCAGTGGCTCCAAGATGGGCAACAGCATGCTGAAGTTACTGATTAGTA
GCGGCAAGTTTTCGAGGTCGAGACAACAGATAAACCATTCCTACCTGTCACATAACAGTAGGTCAACCTATTCAC
CAAAAGCGTCACATATGGGGAAGATAGTGGCTCAGCAACGAAACAGTTTCTGGACTCTTCTACGCCATGATTCTT
CCGTACGCATGGCGACACAACGGGTTGAGCCCAGTTTTTATCCCGACAAATAAGATGTGCACCCATCACAGAGCG
TATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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